RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 ATP5SQ99766 215 aa8□□□□□ -1.13
VTI1A-208ENST00000494728 MARVELD1Q9BSK0 173 aa8□□□□□ -1.13
VTI1A-208ENST00000494728 WFDC1Q9HC57 220 aa8□□□□□ -1.13
VTI1A-208ENST00000494728 HSPB11Q9Y547 144 aa8□□□□□ -1.13
VTI1A-208ENST00000494728 IGHV1OR15-1A0A075B7D0 117 aa7.99□□□□□ -1.13
VTI1A-208ENST00000494728 PRAF2O60831 178 aa7.99□□□□□ -1.13
VTI1A-208ENST00000494728 ZNF138P52744 262 aa7.99□□□□□ -1.13
VTI1A-208ENST00000494728 DEFA1P59665 94 aa7.99□□□□□ -1.13
VTI1A-208ENST00000494728 DEFA3P59666 94 aa7.99□□□□□ -1.13
VTI1A-208ENST00000494728 RANP62826 216 aaKnown RBP7.99□□□□□ -1.13
VTI1A-208ENST00000494728 UBE2L3P68036 154 aaKnown RBP7.99□□□□□ -1.13
VTI1A-208ENST00000494728 FFAR4Q5NUL3 377 aa7.99□□□□□ -1.13
VTI1A-208ENST00000494728 MUC21Q5SSG8 566 aa7.99□□□□□ -1.13
VTI1A-208ENST00000494728 IBA57Q5T440 356 aaKnown RBP7.99□□□□□ -1.13
VTI1A-208ENST00000494728 LCE2AQ5TA79 106 aaPredicted RBP7.99□□□□□ -1.13
VTI1A-208ENST00000494728 Q6ZRN7 208 aaPredicted RBP7.99□□□□□ -1.13
VTI1A-208ENST00000494728 ST6GAL2Q96JF0 529 aa7.99□□□□□ -1.13
VTI1A-208ENST00000494728 MBD2Q9UBB5 411 aa7.99□□□□□ -1.13
VTI1A-208ENST00000494728 RGS13O14921 159 aa7.98□□□□□ -1.13
VTI1A-208ENST00000494728 NMBP08949 121 aa7.98□□□□□ -1.13
VTI1A-208ENST00000494728 LINC00315P59091 139 aa7.98□□□□□ -1.13
VTI1A-208ENST00000494728 TTC32Q5I0X7 151 aa7.98□□□□□ -1.13
VTI1A-208ENST00000494728 SPATA12Q7Z6I5 190 aa7.98□□□□□ -1.13
VTI1A-208ENST00000494728 KCNIP2Q9NS61 270 aa7.98□□□□□ -1.13
VTI1A-208ENST00000494728 MDFICQ9P1T7 246 aa7.98□□□□□ -1.13
VTI1A-208ENST00000494728 VPS13BQ7Z7G8 4022 aa7.97□□□□□ -1.13
VTI1A-208ENST00000494728 SFTA3P0C7M3 94 aa7.97□□□□□ -1.13
VTI1A-208ENST00000494728 FHL2Q14192 279 aa7.97□□□□□ -1.13
VTI1A-208ENST00000494728 ZNF266Q14584 549 aa7.97□□□□□ -1.13
VTI1A-208ENST00000494728 A0A1W2PPQ1 181 aa7.96□□□□□ -1.14
VTI1A-208ENST00000494728 RBAKDNA6NC62 111 aa7.96□□□□□ -1.14
VTI1A-208ENST00000494728 DIRC3C9JPN6 131 aa7.96□□□□□ -1.14
VTI1A-208ENST00000494728 C17orf112F2Z3M2 114 aa7.96□□□□□ -1.14
VTI1A-208ENST00000494728 SSNA1O43805 119 aa7.96□□□□□ -1.14
VTI1A-208ENST00000494728 CDK2AP2O75956 126 aa7.96□□□□□ -1.14
VTI1A-208ENST00000494728 NXPH4O95158 308 aa7.96□□□□□ -1.14
VTI1A-208ENST00000494728 RPL12P30050 165 aaKnown RBP7.96□□□□□ -1.14
VTI1A-208ENST00000494728 FUSP35637 526 aaKnown RBP eCLIP7.96□□□□□ -1.14
VTI1A-208ENST00000494728 CRYBA4P53673 196 aa7.96□□□□□ -1.14
VTI1A-208ENST00000494728 RAB2AP61019 212 aa7.96□□□□□ -1.14
VTI1A-208ENST00000494728 CYCSP99999 105 aaKnown RBP7.96□□□□□ -1.14
VTI1A-208ENST00000494728 ZNF415Q09FC8 603 aa7.96□□□□□ -1.14
VTI1A-208ENST00000494728 Q6AWC8 147 aa7.96□□□□□ -1.14
VTI1A-208ENST00000494728 TVP23CQ96ET8 276 aa7.96□□□□□ -1.14
VTI1A-208ENST00000494728 ZNF479Q96JC4 524 aa7.96□□□□□ -1.14
VTI1A-208ENST00000494728 C8orf49Q96NF6 230 aa7.96□□□□□ -1.14
VTI1A-208ENST00000494728 ARPC5LQ9BPX5 153 aa7.96□□□□□ -1.14
VTI1A-208ENST00000494728 TNFRSF18Q9Y5U5 241 aa7.96□□□□□ -1.14
VTI1A-208ENST00000494728 TRAV8-1A0A0A6YYK1 113 aa7.95□□□□□ -1.14
VTI1A-208ENST00000494728 TRBV7-9A0A0J9YWB2 115 aa7.95□□□□□ -1.14
VTI1A-208ENST00000494728 PAX4O43316 350 aa7.95□□□□□ -1.14
VTI1A-208ENST00000494728 GNG5P63218 68 aa7.95□□□□□ -1.14
VTI1A-208ENST00000494728 KHDC3LQ587J8 217 aa7.95□□□□□ -1.14
VTI1A-208ENST00000494728 MAPKAPK5-AS1Q8N8E1 139 aa7.95□□□□□ -1.14
VTI1A-208ENST00000494728 HYLS1Q96M11 299 aa7.95□□□□□ -1.14
VTI1A-208ENST00000494728 RPH3ALQ9UNE2 315 aa7.95□□□□□ -1.14
VTI1A-208ENST00000494728 ICOSQ9Y6W8 199 aa7.95□□□□□ -1.14
VTI1A-208ENST00000494728 HERC1Q15751 4861 aa7.95□□□□□ -1.14
VTI1A-208ENST00000494728 MYCBP2O75592 4640 aa7.95□□□□□ -1.14
VTI1A-208ENST00000494728 F6UZH7 168 aa7.94□□□□□ -1.14
VTI1A-208ENST00000494728 SIVA1O15304 175 aa7.94□□□□□ -1.14
VTI1A-208ENST00000494728 HMGB3O15347 200 aaKnown RBP7.94□□□□□ -1.14
VTI1A-208ENST00000494728 TMEM183BQ1AE95 376 aa7.94□□□□□ -1.14
VTI1A-208ENST00000494728 TMEM183AQ8IXX5 376 aa7.94□□□□□ -1.14
VTI1A-208ENST00000494728 LYPD1Q8N2G4 141 aa7.94□□□□□ -1.14
VTI1A-208ENST00000494728 PRO0255Q9UI72 69 aa7.94□□□□□ -1.14
VTI1A-208ENST00000494728 SRRM2Q9UQ35 2752 aaKnown RBP7.93□□□□□ -1.14
VTI1A-208ENST00000494728 PET100P0DJ07 73 aa7.93□□□□□ -1.14
VTI1A-208ENST00000494728 BTF3P20290 206 aaKnown RBP7.93□□□□□ -1.14
VTI1A-208ENST00000494728 CSN1S1P47710 185 aa7.93□□□□□ -1.14
VTI1A-208ENST00000494728 SMCPP49901 116 aaPredicted RBP7.93□□□□□ -1.14
VTI1A-208ENST00000494728 LYPD5Q6UWN5 251 aa7.93□□□□□ -1.14
VTI1A-208ENST00000494728 GOLT1AQ6ZVE7 132 aa7.93□□□□□ -1.14
VTI1A-208ENST00000494728 WFDC10BQ8IUB3 73 aa7.93□□□□□ -1.14
VTI1A-208ENST00000494728 OTORQ9NRC9 128 aa7.93□□□□□ -1.14
VTI1A-208ENST00000494728 NAGKQ9UJ70 344 aa7.93□□□□□ -1.14
VTI1A-208ENST00000494728 HHLA3Q9XRX5 114 aa7.93□□□□□ -1.14
VTI1A-208ENST00000494728 ALG5Q9Y673 324 aa7.93□□□□□ -1.14
VTI1A-208ENST00000494728 DNAH8Q96JB1 4490 aa7.93□□□□□ -1.14
VTI1A-208ENST00000494728 LOC100131303A0A0U1RQF7 123 aa7.92□□□□□ -1.14
VTI1A-208ENST00000494728 K7EQD1 137 aa7.92□□□□□ -1.14
VTI1A-208ENST00000494728 GNRH2O43555 120 aa7.92□□□□□ -1.14
VTI1A-208ENST00000494728 IFNA5P01569 189 aa7.92□□□□□ -1.14
VTI1A-208ENST00000494728 DNAH10OSP0CZ25 163 aa7.92□□□□□ -1.14
VTI1A-208ENST00000494728 TAS2R45P59539 299 aa7.92□□□□□ -1.14
VTI1A-208ENST00000494728 TDRG1Q3Y452 100 aa7.92□□□□□ -1.14
VTI1A-208ENST00000494728 OR10G4Q8NGN3 311 aa7.92□□□□□ -1.14
VTI1A-208ENST00000494728 SCGB1C1Q8TD33 95 aa7.92□□□□□ -1.14
VTI1A-208ENST00000494728 SGK494Q96LW2 274 aa7.92□□□□□ -1.14
VTI1A-208ENST00000494728 IGHV3-16A0A0C4DH30 117 aa7.91□□□□□ -1.14
VTI1A-208ENST00000494728 PGPA6NDG6 321 aa7.91□□□□□ -1.14
VTI1A-208ENST00000494728 TYMSP04818 313 aa7.91□□□□□ -1.14
VTI1A-208ENST00000494728 ARL14EPLP0DKL9 152 aa7.91□□□□□ -1.14
VTI1A-208ENST00000494728 TMED6Q8WW62 240 aa7.91□□□□□ -1.14
VTI1A-208ENST00000494728 RASL10AQ92737 203 aa7.91□□□□□ -1.14
VTI1A-208ENST00000494728 C11orf21Q9P2W6 132 aa7.91□□□□□ -1.14
VTI1A-208ENST00000494728 LENEPQ9Y5L5 61 aa7.91□□□□□ -1.14
VTI1A-208ENST00000494728 TRGV11A0A075B6L2 103 aa7.9□□□□□ -1.14
VTI1A-208ENST00000494728 TRGV4A0A0C4DH28 118 aa7.9□□□□□ -1.14
VTI1A-208ENST00000494728 PTTG1O95997 202 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 107.2 ms