RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 ARL14EPLP0DKL9 152 aa23.21■■□□□ 1.31
CBX4-203ENST00000494546 TCL1AP56279 114 aa23.21■■□□□ 1.31
CBX4-203ENST00000494546 LINC00336Q6ZUF6 198 aa23.21■■□□□ 1.31
CBX4-203ENST00000494546 A0A0J9YY99 117 aa23.2■■□□□ 1.3
CBX4-203ENST00000494546 FAM3BP58499 235 aaPredicted RBP23.2■■□□□ 1.3
CBX4-203ENST00000494546 OR2T35Q8NGX2 323 aa23.2■■□□□ 1.3
CBX4-203ENST00000494546 SH3BGRL3Q9H299 93 aa23.2■■□□□ 1.3
CBX4-203ENST00000494546 CCL18P55774 89 aa23.19■■□□□ 1.3
CBX4-203ENST00000494546 IBA57Q5T440 356 aaKnown RBP23.19■■□□□ 1.3
CBX4-203ENST00000494546 Q6ZR54 194 aa23.19■■□□□ 1.3
CBX4-203ENST00000494546 NACAE9PAV3 2078 aa23.18■■□□□ 1.3
CBX4-203ENST00000494546 RNF222A6NCQ9 220 aa23.18■■□□□ 1.3
CBX4-203ENST00000494546 MUC21Q5SSG8 566 aa23.18■■□□□ 1.3
CBX4-203ENST00000494546 GOLT1AQ6ZVE7 132 aa23.18■■□□□ 1.3
CBX4-203ENST00000494546 RAB24Q969Q5 203 aa23.18■■□□□ 1.3
CBX4-203ENST00000494546 LENEPQ9Y5L5 61 aa23.18■■□□□ 1.3
CBX4-203ENST00000494546 MBP02144 154 aa23.17■■□□□ 1.3
CBX4-203ENST00000494546 STAG3L2P0CL84 134 aa23.17■■□□□ 1.3
CBX4-203ENST00000494546 STAG3L3P0CL85 134 aa23.17■■□□□ 1.3
CBX4-203ENST00000494546 SERF2P84101 59 aa23.17■■□□□ 1.3
CBX4-203ENST00000494546 TNFSF18Q9UNG2 199 aa23.17■■□□□ 1.3
CBX4-203ENST00000494546 RTL8CO15255 209 aa23.16■■□□□ 1.3
CBX4-203ENST00000494546 SPINK4O60575 86 aa23.16■■□□□ 1.3
CBX4-203ENST00000494546 RPL7L1Q6DKI1 246 aaKnown RBP23.16■■□□□ 1.3
CBX4-203ENST00000494546 TMED6Q8WW62 240 aa23.16■■□□□ 1.3
CBX4-203ENST00000494546 GNG5P63218 68 aa23.15■■□□□ 1.3
CBX4-203ENST00000494546 LINC00588Q9Y4M8 146 aa23.15■■□□□ 1.3
CBX4-203ENST00000494546 BORCS7-ASMTA0A0B4J1R7 106 aa23.14■■□□□ 1.29
CBX4-203ENST00000494546 C18orf15Q96N68 181 aa23.14■■□□□ 1.29
CBX4-203ENST00000494546 GCHFRP30047 84 aa23.13■■□□□ 1.29
CBX4-203ENST00000494546 ZNF415Q09FC8 603 aa23.13■■□□□ 1.29
CBX4-203ENST00000494546 Q6AWC8 147 aa23.13■■□□□ 1.29
CBX4-203ENST00000494546 ARL6IP6Q8N6S5 226 aa23.13■■□□□ 1.29
CBX4-203ENST00000494546 MRPL16Q9NX20 251 aaKnown RBP23.13■■□□□ 1.29
CBX4-203ENST00000494546 TRAV8-1A0A0A6YYK1 113 aa23.12■■□□□ 1.29
CBX4-203ENST00000494546 PRSS29PA6NIE9 313 aa23.12■■□□□ 1.29
CBX4-203ENST00000494546 ZNRF2Q8NHG8 242 aa23.12■■□□□ 1.29
CBX4-203ENST00000494546 ACTR3CQ9C0K3 210 aaPredicted RBP23.12■■□□□ 1.29
CBX4-203ENST00000494546 SSX7Q7RTT5 188 aa23.11■■□□□ 1.29
CBX4-203ENST00000494546 ST6GAL2Q96JF0 529 aa23.11■■□□□ 1.29
CBX4-203ENST00000494546 NAGKQ9UJ70 344 aa23.11■■□□□ 1.29
CBX4-203ENST00000494546 FAM159AQ6UWV7 190 aa23.1■■□□□ 1.29
CBX4-203ENST00000494546 G3V3Q6 166 aa23.09■■□□□ 1.29
CBX4-203ENST00000494546 H3BNG1 76 aa23.09■■□□□ 1.29
CBX4-203ENST00000494546 MDFICQ9P1T7 246 aa23.09■■□□□ 1.29
CBX4-203ENST00000494546 F6UZH7 168 aa23.08■■□□□ 1.29
CBX4-203ENST00000494546 CXorf1O96002 111 aa23.08■■□□□ 1.29
CBX4-203ENST00000494546 IGHV3-53P01767 116 aa23.08■■□□□ 1.29
CBX4-203ENST00000494546 TMEM183BQ1AE95 376 aa23.08■■□□□ 1.29
CBX4-203ENST00000494546 SOHLH1Q5JUK2 328 aa23.08■■□□□ 1.29
CBX4-203ENST00000494546 C1orf134Q5TEV5 83 aa23.08■■□□□ 1.29
CBX4-203ENST00000494546 IQCF2Q8IXL9 164 aa23.08■■□□□ 1.29
CBX4-203ENST00000494546 TMEM183AQ8IXX5 376 aa23.08■■□□□ 1.29
CBX4-203ENST00000494546 SGK494Q96LW2 274 aa23.08■■□□□ 1.29
CBX4-203ENST00000494546 TREM1Q9NP99 234 aa23.08■■□□□ 1.29
CBX4-203ENST00000494546 C5orf17Q8NAS9 161 aa23.07■■□□□ 1.28
CBX4-203ENST00000494546 SUN5Q8TC36 379 aa23.07■■□□□ 1.28
CBX4-203ENST00000494546 TVP23CQ96ET8 276 aa23.07■■□□□ 1.28
CBX4-203ENST00000494546 VSIG2Q96IQ7 327 aa23.07■■□□□ 1.28
CBX4-203ENST00000494546 TMEM167BQ9NRX6 74 aa23.07■■□□□ 1.28
CBX4-203ENST00000494546 TRGV11A0A075B6L2 103 aa23.06■■□□□ 1.28
CBX4-203ENST00000494546 ARPC5O15511 151 aa23.06■■□□□ 1.28
CBX4-203ENST00000494546 DNAH2Q9P225 4427 aa23.05■■□□□ 1.28
CBX4-203ENST00000494546 NBDYA0A0U1RRE5 68 aa23.05■■□□□ 1.28
CBX4-203ENST00000494546 SERTM2A0A1B0GWG4 89 aa23.04■■□□□ 1.28
CBX4-203ENST00000494546 TCRAP04437 139 aa23.04■■□□□ 1.28
CBX4-203ENST00000494546 SUMO1P63165 101 aaKnown RBP23.04■■□□□ 1.28
CBX4-203ENST00000494546 TRAV21A0A0B4J279 112 aa23.03■■□□□ 1.28
CBX4-203ENST00000494546 A0A1B0GVY2 172 aa23.03■■□□□ 1.28
CBX4-203ENST00000494546 ESRGQ1W209 222 aa23.03■■□□□ 1.28
CBX4-203ENST00000494546 NDFIP1Q9BT67 221 aa23.03■■□□□ 1.28
CBX4-203ENST00000494546 HECTD4Q9Y4D8 3996 aa23.02■■□□□ 1.28
CBX4-203ENST00000494546 SMLR1H3BR10 107 aa23.02■■□□□ 1.28
CBX4-203ENST00000494546 K7EQM0 130 aa23.02■■□□□ 1.28
CBX4-203ENST00000494546 A0A096LPF7 62 aa23.01■■□□□ 1.27
CBX4-203ENST00000494546 GGTLC3B5MD39 225 aa23.01■■□□□ 1.27
CBX4-203ENST00000494546 ZNF726P1Q15940 193 aa23.01■■□□□ 1.27
CBX4-203ENST00000494546 TDRG1Q3Y452 100 aa23.01■■□□□ 1.27
CBX4-203ENST00000494546 SPXQ9BT56 116 aa23.01■■□□□ 1.27
CBX4-203ENST00000494546 Q9H8V8 135 aa23.01■■□□□ 1.27
CBX4-203ENST00000494546 TAAR5O14804 337 aa23■■□□□ 1.27
CBX4-203ENST00000494546 PAX4O43316 350 aa23■■□□□ 1.27
CBX4-203ENST00000494546 GNRH2O43555 120 aa23■■□□□ 1.27
CBX4-203ENST00000494546 AKR1C8PQ5T2L2 129 aa23■■□□□ 1.27
CBX4-203ENST00000494546 EPDR1Q9UM22 224 aa23■■□□□ 1.27
CBX4-203ENST00000494546 CTXND1A0A1B0GTU2 59 aa22.99■■□□□ 1.27
CBX4-203ENST00000494546 PSG8Q9UQ74 426 aa22.99■■□□□ 1.27
CBX4-203ENST00000494546 MUC4Q99102 2169 aa22.99■■□□□ 1.27
CBX4-203ENST00000494546 C8orf49Q96NF6 230 aa22.98■■□□□ 1.27
CBX4-203ENST00000494546 CYTL1Q9NRR1 136 aa22.98■■□□□ 1.27
CBX4-203ENST00000494546 PRO0255Q9UI72 69 aa22.98■■□□□ 1.27
CBX4-203ENST00000494546 FAT2Q9NYQ8 4349 aa22.98■■□□□ 1.27
CBX4-203ENST00000494546 CYB561D1Q8N8Q1 229 aa22.97■■□□□ 1.27
CBX4-203ENST00000494546 SDF2L1Q9HCN8 221 aa22.97■■□□□ 1.27
CBX4-203ENST00000494546 DNAH17Q9UFH2 4485 aa22.97■■□□□ 1.27
CBX4-203ENST00000494546 A0A1W2PRE2 83 aa22.96■■□□□ 1.27
CBX4-203ENST00000494546 TYMSP04818 313 aa22.96■■□□□ 1.27
CBX4-203ENST00000494546 FLI1Q01543 452 aaPredicted RBP22.96■■□□□ 1.27
CBX4-203ENST00000494546 SLAQ13239 276 aa22.96■■□□□ 1.27
CBX4-203ENST00000494546 FHL2Q14192 279 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms