RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 GAGE7O76087 117 aa15.19■□□□□ 0.02
COL27A1-207ENST00000494090 GAGE12FP0CL80 117 aa15.19■□□□□ 0.02
COL27A1-207ENST00000494090 GAGE12GP0CL81 117 aa15.19■□□□□ 0.02
COL27A1-207ENST00000494090 GAGE12IP0CL82 117 aa15.19■□□□□ 0.02
COL27A1-207ENST00000494090 ANXA2RQ3ZCQ2 193 aa15.19■□□□□ 0.02
COL27A1-207ENST00000494090 C11orf53Q8IXP5 236 aa15.19■□□□□ 0.02
COL27A1-207ENST00000494090 YLPM1P49750 1951 aaKnown RBP15.18■□□□□ 0.02
COL27A1-207ENST00000494090 ZNF407Q9C0G0 2248 aa15.18■□□□□ 0.02
COL27A1-207ENST00000494090 INAFM2P0DMQ5 153 aa15.18■□□□□ 0.02
COL27A1-207ENST00000494090 SIGLEC8Q9NYZ4 499 aa15.18■□□□□ 0.02
COL27A1-207ENST00000494090 COX8AP10176 69 aa15.18■□□□□ 0.02
COL27A1-207ENST00000494090 IGLL1P15814 213 aa15.18■□□□□ 0.02
COL27A1-207ENST00000494090 KRTAP27-1Q3LI81 207 aa15.18■□□□□ 0.02
COL27A1-207ENST00000494090 LTAP01374 205 aa15.17■□□□□ 0.02
COL27A1-207ENST00000494090 ZNRF2Q8NHG8 242 aa15.17■□□□□ 0.02
COL27A1-207ENST00000494090 K7EN84 100 aa15.17■□□□□ 0.02
COL27A1-207ENST00000494090 C9orf118A6NHY6 69 aa15.16■□□□□ 0.02
COL27A1-207ENST00000494090 RPL32P62910 135 aaKnown RBP15.16■□□□□ 0.02
COL27A1-207ENST00000494090 CFHR3Q02985 330 aa15.16■□□□□ 0.02
COL27A1-207ENST00000494090 OCIAD2Q56VL3 154 aa15.16■□□□□ 0.02
COL27A1-207ENST00000494090 IGHV3-16A0A0C4DH30 117 aa15.16■□□□□ 0.02
COL27A1-207ENST00000494090 TMEM126AQ9H061 195 aa15.16■□□□□ 0.02
COL27A1-207ENST00000494090 KIAA1671Q9BY89 1806 aa15.15■□□□□ 0.02
COL27A1-207ENST00000494090 PYGO2Q9BRQ0 406 aa15.15■□□□□ 0.02
COL27A1-207ENST00000494090 GTSF1LQ9H1H1 148 aa15.15■□□□□ 0.02
COL27A1-207ENST00000494090 VPREB3Q9UKI3 123 aa15.15■□□□□ 0.02
COL27A1-207ENST00000494090 TRBV20-1A0A075B6N2 111 aa15.15■□□□□ 0.02
COL27A1-207ENST00000494090 C9JAW5 83 aa15.15■□□□□ 0.02
COL27A1-207ENST00000494090 FOXI2Q6ZQN5 318 aa15.15■□□□□ 0.02
COL27A1-207ENST00000494090 LYPD6Q86Y78 171 aa15.15■□□□□ 0.02
COL27A1-207ENST00000494090 ZNF491Q8N8L2 437 aa15.14■□□□□ 0.01
COL27A1-207ENST00000494090 MRPL53Q96EL3 112 aaKnown RBP15.14■□□□□ 0.01
COL27A1-207ENST00000494090 SOCS3O14543 225 aa15.14■□□□□ 0.01
COL27A1-207ENST00000494090 GPR179Q6PRD1 2367 aa15.14■□□□□ 0.01
COL27A1-207ENST00000494090 WIPF2Q8TF74 440 aaPredicted RBP15.14■□□□□ 0.01
COL27A1-207ENST00000494090 NPYP01303 97 aa15.14■□□□□ 0.01
COL27A1-207ENST00000494090 OR11H6Q8NGC7 330 aa15.14■□□□□ 0.01
COL27A1-207ENST00000494090 C20orf78Q9BR46 151 aa15.14■□□□□ 0.01
COL27A1-207ENST00000494090 FGF23Q9GZV9 251 aaPredicted RBP15.14■□□□□ 0.01
COL27A1-207ENST00000494090 TSSC4Q9Y5U2 329 aaPredicted RBP15.14■□□□□ 0.01
COL27A1-207ENST00000494090 SLX1AQ9BQ83 275 aa15.14■□□□□ 0.01
COL27A1-207ENST00000494090 HLA-DRB4P13762 266 aa15.13■□□□□ 0.01
COL27A1-207ENST00000494090 HLA-DRB4X5D2U9 266 aa15.13■□□□□ 0.01
COL27A1-207ENST00000494090 ZMAT4Q9H898 229 aa15.13■□□□□ 0.01
COL27A1-207ENST00000494090 TRAV26-2A0A0B4J265 109 aa15.13■□□□□ 0.01
COL27A1-207ENST00000494090 GAGE2AQ6NT46 116 aa15.13■□□□□ 0.01
COL27A1-207ENST00000494090 IGF2-ASQ6U949 168 aa15.13■□□□□ 0.01
COL27A1-207ENST00000494090 LENEPQ9Y5L5 61 aa15.13■□□□□ 0.01
COL27A1-207ENST00000494090 IGLC7A0M8Q6 106 aa15.13■□□□□ 0.01
COL27A1-207ENST00000494090 SMIM2Q9BVW6 85 aa15.13■□□□□ 0.01
COL27A1-207ENST00000494090 ZNF48Q96MX3 618 aaPredicted RBP15.12■□□□□ 0.01
COL27A1-207ENST00000494090 PKDREJQ9NTG1 2253 aa15.12■□□□□ 0.01
COL27A1-207ENST00000494090 HERVK_113P63121 156 aa15.12■□□□□ 0.01
COL27A1-207ENST00000494090 ZNF625Q96I27 306 aaPredicted RBP15.12■□□□□ 0.01
COL27A1-207ENST00000494090 GAGE6Q13070 117 aa15.12■□□□□ 0.01
COL27A1-207ENST00000494090 DOCK11Q5JSL3 2073 aa15.12■□□□□ 0.01
COL27A1-207ENST00000494090 USF3Q68DE3 2245 aa15.12■□□□□ 0.01
COL27A1-207ENST00000494090 NOTCH4Q99466 2003 aa15.11■□□□□ 0.01
COL27A1-207ENST00000494090 RHOHQ15669 191 aa15.11■□□□□ 0.01
COL27A1-207ENST00000494090 NUP210Q8TEM1 1887 aaPredicted RBP15.11■□□□□ 0.01
COL27A1-207ENST00000494090 KLF5Q13887 457 aaPredicted RBP15.11■□□□□ 0.01
COL27A1-207ENST00000494090 RBMY1FQ15415 496 aaKnown RBP15.11■□□□□ 0.01
COL27A1-207ENST00000494090 PRSS33Q8NF86 280 aa15.11■□□□□ 0.01
COL27A1-207ENST00000494090 PKIGQ9Y2B9 76 aa15.11■□□□□ 0.01
COL27A1-207ENST00000494090 TRAV12-2A0A075B6T6 113 aa15.11■□□□□ 0.01
COL27A1-207ENST00000494090 PFN2P35080 140 aa15.1■□□□□ 0.01
COL27A1-207ENST00000494090 SHISA9B4DS77 424 aa15.1■□□□□ 0.01
COL27A1-207ENST00000494090 CADP27708 2225 aa15.1■□□□□ 0.01
COL27A1-207ENST00000494090 LHBP01229 141 aa15.1■□□□□ 0.01
COL27A1-207ENST00000494090 NDUFA12Q9UI09 145 aa15.1■□□□□ 0.01
COL27A1-207ENST00000494090 HOXB4P17483 251 aaPredicted RBP15.1■□□□□ 0.01
COL27A1-207ENST00000494090 HOXD3P31249 432 aaPredicted RBP15.1■□□□□ 0.01
COL27A1-207ENST00000494090 MRPL35Q9NZE8 188 aaKnown RBP15.1■□□□□ 0.01
COL27A1-207ENST00000494090 SPANXA1Q9NS26 97 aa15.09■□□□□ 0.01
COL27A1-207ENST00000494090 IGFL2Q6UWQ7 119 aa15.09■□□□□ 0.01
COL27A1-207ENST00000494090 SPINK8P0C7L1 97 aa15.09■□□□□ 0.01
COL27A1-207ENST00000494090 RBAKDNA6NC62 111 aa15.09■□□□□ 0.01
COL27A1-207ENST00000494090 F8VRH5 84 aa15.09■□□□□ 0.01
COL27A1-207ENST00000494090 TAL2Q16559 108 aa15.09■□□□□ 0.01
COL27A1-207ENST00000494090 BVES-AS1Q5T3Y7 98 aa15.09■□□□□ 0.01
COL27A1-207ENST00000494090 ASPHD1Q5U4P2 390 aa15.09■□□□□ 0.01
COL27A1-207ENST00000494090 C22orf46C9J442 243 aa15.08■□□□□ 0.01
COL27A1-207ENST00000494090 CTSZQ9UBR2 303 aa15.08■□□□□ 0.01
COL27A1-207ENST00000494090 K7EMI3 77 aa15.08■□□□□ 0
COL27A1-207ENST00000494090 SIVA1O15304 175 aa15.08■□□□□ 0
COL27A1-207ENST00000494090 SPTAN1Q13813 2472 aaKnown RBP15.08■□□□□ 0
COL27A1-207ENST00000494090 WNK2Q9Y3S1 2297 aa15.08■□□□□ 0
COL27A1-207ENST00000494090 COA6Q5JTJ3 125 aaKnown RBP15.08■□□□□ 0
COL27A1-207ENST00000494090 FAM120AOSQ5T036 256 aa15.08■□□□□ 0
COL27A1-207ENST00000494090 TEX48A0A1B0GUV7 120 aa15.07■□□□□ 0
COL27A1-207ENST00000494090 DEFB112Q30KQ8 113 aa15.07■□□□□ 0
COL27A1-207ENST00000494090 SPANXDQ9BXN6 97 aa15.07■□□□□ 0
COL27A1-207ENST00000494090 K7EP34 96 aa15.07■□□□□ 0
COL27A1-207ENST00000494090 C17orf77Q96MU5 243 aa15.07■□□□□ 0
COL27A1-207ENST00000494090 TRAV13-2A0A0B4J235 113 aa15.07■□□□□ 0
COL27A1-207ENST00000494090 NDUFS7O75251 213 aa15.07■□□□□ 0
COL27A1-207ENST00000494090 UBE2WQ96B02 151 aa15.07■□□□□ 0
COL27A1-207ENST00000494090 ARFGEF3Q5TH69 2177 aa15.07■□□□□ 0
COL27A1-207ENST00000494090 NPSP0C0P6 89 aa15.06■□□□□ 0
COL27A1-207ENST00000494090 RNF152Q8N8N0 203 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 118 ms