RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 SORL1Q92673 2214 aa6.33□□□□□ -1.4
HDAC6-234ENST00000493923 IGHV1-24A0A0C4DH33 117 aa6.33□□□□□ -1.4
HDAC6-234ENST00000493923 A0A1W2PRE2 83 aa6.33□□□□□ -1.4
HDAC6-234ENST00000493923 TMEM30CPA0ZSE6 113 aa6.33□□□□□ -1.4
HDAC6-234ENST00000493923 IGKV1-39P01597 117 aa6.33□□□□□ -1.4
HDAC6-234ENST00000493923 IGHG2P01859 326 aa6.33□□□□□ -1.4
HDAC6-234ENST00000493923 PF4P02776 101 aa6.33□□□□□ -1.4
HDAC6-234ENST00000493923 IGKV1D-39P04432 117 aa6.33□□□□□ -1.4
HDAC6-234ENST00000493923 SCTP09683 121 aa6.33□□□□□ -1.4
HDAC6-234ENST00000493923 FAM106CPP0CH98 169 aa6.33□□□□□ -1.4
HDAC6-234ENST00000493923 MGST1P10620 155 aaKnown RBP6.33□□□□□ -1.4
HDAC6-234ENST00000493923 MFAP2P55001 183 aa6.33□□□□□ -1.4
HDAC6-234ENST00000493923 ZNF816Q0VGE8 651 aaPredicted RBP6.33□□□□□ -1.4
HDAC6-234ENST00000493923 DEFB136Q30KP8 78 aa6.33□□□□□ -1.4
HDAC6-234ENST00000493923 ZNF585BQ52M93 769 aa6.33□□□□□ -1.4
HDAC6-234ENST00000493923 CT83Q5H943 113 aa6.33□□□□□ -1.4
HDAC6-234ENST00000493923 PQLC2Q6ZP29 291 aa6.33□□□□□ -1.4
HDAC6-234ENST00000493923 MOB3BQ86TA1 216 aa6.33□□□□□ -1.4
HDAC6-234ENST00000493923 LINC00311Q8N616 119 aa6.33□□□□□ -1.4
HDAC6-234ENST00000493923 Q8N9W7 124 aa6.33□□□□□ -1.4
HDAC6-234ENST00000493923 AMMECR1Q9Y4X0 333 aaPredicted RBP6.33□□□□□ -1.4
HDAC6-234ENST00000493923 DYNC2H1Q8NCM8 4307 aaKnown RBP6.33□□□□□ -1.4
HDAC6-234ENST00000493923 TMEM262E9PQX1 116 aa6.32□□□□□ -1.4
HDAC6-234ENST00000493923 CA1P00915 261 aaPredicted RBP6.32□□□□□ -1.4
HDAC6-234ENST00000493923 P0C879 139 aa6.32□□□□□ -1.4
HDAC6-234ENST00000493923 HLA-DRB4P13762 266 aa6.32□□□□□ -1.4
HDAC6-234ENST00000493923 CNTFRP26992 372 aa6.32□□□□□ -1.4
HDAC6-234ENST00000493923 HBBP68871 147 aa6.32□□□□□ -1.4
HDAC6-234ENST00000493923 EGFEM1PQ0D2K5 195 aa6.32□□□□□ -1.4
HDAC6-234ENST00000493923 TAL2Q16559 108 aa6.32□□□□□ -1.4
HDAC6-234ENST00000493923 LGALS9BQ3B8N2 356 aa6.32□□□□□ -1.4
HDAC6-234ENST00000493923 LGALS9CQ6DKI2 356 aa6.32□□□□□ -1.4
HDAC6-234ENST00000493923 ZNF562Q6V9R5 426 aa6.32□□□□□ -1.4
HDAC6-234ENST00000493923 OR10X1Q8NGY0 326 aa6.32□□□□□ -1.4
HDAC6-234ENST00000493923 HARBI1Q96MB7 349 aa6.32□□□□□ -1.4
HDAC6-234ENST00000493923 ANAPC13Q9BS18 74 aa6.32□□□□□ -1.4
HDAC6-234ENST00000493923 NDFIP1Q9BT67 221 aa6.32□□□□□ -1.4
HDAC6-234ENST00000493923 TECRQ9NZ01 308 aaKnown RBP6.32□□□□□ -1.4
HDAC6-234ENST00000493923 HLA-DRB4X5D2U9 266 aa6.32□□□□□ -1.4
HDAC6-234ENST00000493923 A0A1B0GW15 77 aa6.31□□□□□ -1.4
HDAC6-234ENST00000493923 A0A1B0GXF2 115 aa6.31□□□□□ -1.4
HDAC6-234ENST00000493923 SPINK8P0C7L1 97 aa6.31□□□□□ -1.4
HDAC6-234ENST00000493923 FGF6P10767 208 aa6.31□□□□□ -1.4
HDAC6-234ENST00000493923 ATP5IP56385 69 aaPredicted RBP6.31□□□□□ -1.4
HDAC6-234ENST00000493923 CFHR3Q02985 330 aa6.31□□□□□ -1.4
HDAC6-234ENST00000493923 LYRM7Q5U5X0 104 aa6.31□□□□□ -1.4
HDAC6-234ENST00000493923 TEPPQ6URK8 271 aa6.31□□□□□ -1.4
HDAC6-234ENST00000493923 SLC25A48Q6ZT89 311 aaKnown RBP6.31□□□□□ -1.4
HDAC6-234ENST00000493923 KLHL30-AS1Q8NEE0 82 aa6.31□□□□□ -1.4
HDAC6-234ENST00000493923 GTSF1Q8WW33 167 aa6.31□□□□□ -1.4
HDAC6-234ENST00000493923 S1PR3Q99500 378 aa6.31□□□□□ -1.4
HDAC6-234ENST00000493923 GFRA4Q9GZZ7 299 aa6.31□□□□□ -1.4
HDAC6-234ENST00000493923 PLEKHA3Q9HB20 300 aa6.31□□□□□ -1.4
HDAC6-234ENST00000493923 SPANXCQ9NY87 97 aa6.31□□□□□ -1.4
HDAC6-234ENST00000493923 NCBP2LA6PVI3 153 aaKnown RBP6.3□□□□□ -1.4
HDAC6-234ENST00000493923 ZNF137PP52743 207 aa6.3□□□□□ -1.4
HDAC6-234ENST00000493923 GAGE13Q4V321 117 aa6.3□□□□□ -1.4
HDAC6-234ENST00000493923 DEFB121Q5J5C9 76 aa6.3□□□□□ -1.4
HDAC6-234ENST00000493923 ASPHD1Q5U4P2 390 aa6.3□□□□□ -1.4
HDAC6-234ENST00000493923 ZFAND6Q6FIF0 208 aa6.3□□□□□ -1.4
HDAC6-234ENST00000493923 H2BFWTQ7Z2G1 175 aa6.3□□□□□ -1.4
HDAC6-234ENST00000493923 C8orf31Q8N9H6 132 aa6.3□□□□□ -1.4
HDAC6-234ENST00000493923 IGF2BP2-AS1Q96M15 143 aa6.3□□□□□ -1.4
HDAC6-234ENST00000493923 SPAG8Q99932 426 aaPredicted RBP6.3□□□□□ -1.4
HDAC6-234ENST00000493923 C1QTNF4Q9BXJ3 329 aa6.3□□□□□ -1.4
HDAC6-234ENST00000493923 SPANXDQ9BXN6 97 aa6.3□□□□□ -1.4
HDAC6-234ENST00000493923 MRPL32Q9BYC8 188 aaKnown RBP6.3□□□□□ -1.4
HDAC6-234ENST00000493923 MRPL20Q9BYC9 149 aaKnown RBP6.3□□□□□ -1.4
HDAC6-234ENST00000493923 KLK15Q9H2R5 256 aa6.3□□□□□ -1.4
HDAC6-234ENST00000493923 TNCP24821 2201 aa6.29□□□□□ -1.4
HDAC6-234ENST00000493923 IGKV1-6A0A0C4DH72 117 aa6.29□□□□□ -1.4
HDAC6-234ENST00000493923 A8MWL6 223 aa6.29□□□□□ -1.4
HDAC6-234ENST00000493923 E9PLD3 99 aa6.29□□□□□ -1.4
HDAC6-234ENST00000493923 G3V318 75 aa6.29□□□□□ -1.4
HDAC6-234ENST00000493923 H3BMG7 143 aa6.29□□□□□ -1.4
HDAC6-234ENST00000493923 SPINK4O60575 86 aa6.29□□□□□ -1.4
HDAC6-234ENST00000493923 MOSP00540 346 aa6.29□□□□□ -1.4
HDAC6-234ENST00000493923 MYCNOSP40205 109 aa6.29□□□□□ -1.4
HDAC6-234ENST00000493923 RPL8P62917 257 aaKnown RBP6.29□□□□□ -1.4
HDAC6-234ENST00000493923 HERV-K104P63124 156 aa6.29□□□□□ -1.4
HDAC6-234ENST00000493923 NDPQ00604 133 aa6.29□□□□□ -1.4
HDAC6-234ENST00000493923 TMEM177Q53S58 311 aa6.29□□□□□ -1.4
HDAC6-234ENST00000493923 NUP35Q8NFH5 326 aa6.29□□□□□ -1.4
HDAC6-234ENST00000493923 RNASE7Q9H1E1 156 aaKnown RBP6.29□□□□□ -1.4
HDAC6-234ENST00000493923 HEYLQ9NQ87 328 aaPredicted RBP6.29□□□□□ -1.4
HDAC6-234ENST00000493923 MBNL3Q9NUK0 354 aaKnown RBP6.29□□□□□ -1.4
HDAC6-234ENST00000493923 OR1A1Q9P1Q5 309 aa6.29□□□□□ -1.4
HDAC6-234ENST00000493923 GNG12Q9UBI6 72 aa6.29□□□□□ -1.4
HDAC6-234ENST00000493923 SS18L2Q9UHA2 77 aa6.29□□□□□ -1.4
HDAC6-234ENST00000493923 C15orf62A8K5M9 175 aa6.28□□□□□ -1.4
HDAC6-234ENST00000493923 CCL24O00175 119 aa6.28□□□□□ -1.4
HDAC6-234ENST00000493923 CHEK1O14757 476 aa6.28□□□□□ -1.4
HDAC6-234ENST00000493923 APOMO95445 188 aa6.28□□□□□ -1.4
HDAC6-234ENST00000493923 FRMD6-AS1P0C7T7 363 aa6.28□□□□□ -1.4
HDAC6-234ENST00000493923 G6PCP35575 357 aa6.28□□□□□ -1.4
HDAC6-234ENST00000493923 LINC00205P59089 165 aa6.28□□□□□ -1.4
HDAC6-234ENST00000493923 FXYD3Q14802 87 aa6.28□□□□□ -1.4
HDAC6-234ENST00000493923 RNF152Q8N8N0 203 aa6.28□□□□□ -1.4
HDAC6-234ENST00000493923 RNF183Q96D59 192 aa6.28□□□□□ -1.4
HDAC6-234ENST00000493923 PRR25Q96S07 402 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms