RNA–Protein interactions for RNA: ENST00000491659.5

USP39-217, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 648 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-217ENST00000491659 Q5BKY6 102 aa10.59□□□□□ -0.71
USP39-217ENST00000491659 C11orf72Q8NBR9 251 aa10.59□□□□□ -0.71
USP39-217ENST00000491659 GSN-AS1Q9NRJ2 163 aa10.59□□□□□ -0.71
USP39-217ENST00000491659 BOLA1Q9Y3E2 137 aa10.59□□□□□ -0.71
USP39-217ENST00000491659 LENEPQ9Y5L5 61 aa10.59□□□□□ -0.71
USP39-217ENST00000491659 IGLV2-18A0A075B6J9 118 aa10.58□□□□□ -0.72
USP39-217ENST00000491659 ARL14EPLP0DKL9 152 aa10.58□□□□□ -0.72
USP39-217ENST00000491659 TCL1AP56279 114 aa10.58□□□□□ -0.72
USP39-217ENST00000491659 FAM3BP58499 235 aaPredicted RBP10.58□□□□□ -0.72
USP39-217ENST00000491659 SERF2P84101 59 aa10.58□□□□□ -0.72
USP39-217ENST00000491659 IFITM2Q01629 132 aa10.58□□□□□ -0.72
USP39-217ENST00000491659 LGALS9BQ3B8N2 356 aa10.58□□□□□ -0.72
USP39-217ENST00000491659 IBA57Q5T440 356 aaKnown RBP10.58□□□□□ -0.72
USP39-217ENST00000491659 Q6ZTI0 123 aa10.58□□□□□ -0.72
USP39-217ENST00000491659 TMED6Q8WW62 240 aa10.58□□□□□ -0.72
USP39-217ENST00000491659 TRGV2A0A075B6R0 118 aa10.57□□□□□ -0.72
USP39-217ENST00000491659 TRAV26-1A0A087WT03 109 aa10.57□□□□□ -0.72
USP39-217ENST00000491659 TRGV1A0A0A0MS02 117 aa10.57□□□□□ -0.72
USP39-217ENST00000491659 BORCS7-ASMTA0A0B4J1R7 106 aa10.57□□□□□ -0.72
USP39-217ENST00000491659 RNF222A6NCQ9 220 aa10.57□□□□□ -0.72
USP39-217ENST00000491659 STAG3L2P0CL84 134 aa10.57□□□□□ -0.72
USP39-217ENST00000491659 STAG3L3P0CL85 134 aa10.57□□□□□ -0.72
USP39-217ENST00000491659 ZNF415Q09FC8 603 aa10.57□□□□□ -0.72
USP39-217ENST00000491659 LGALSLQ3ZCW2 172 aaPredicted RBP10.57□□□□□ -0.72
USP39-217ENST00000491659 LINC00336Q6ZUF6 198 aa10.57□□□□□ -0.72
USP39-217ENST00000491659 ARL6IP6Q8N6S5 226 aa10.57□□□□□ -0.72
USP39-217ENST00000491659 OR11H4Q8NGC9 324 aa10.57□□□□□ -0.72
USP39-217ENST00000491659 GNPNAT1Q96EK6 184 aaPredicted RBP10.57□□□□□ -0.72
USP39-217ENST00000491659 TMPRSS5Q9H3S3 457 aa10.57□□□□□ -0.72
USP39-217ENST00000491659 TNFSF18Q9UNG2 199 aa10.57□□□□□ -0.72
USP39-217ENST00000491659 FRAS1Q86XX4 4008 aa10.57□□□□□ -0.72
USP39-217ENST00000491659 CCL18P55774 89 aa10.56□□□□□ -0.72
USP39-217ENST00000491659 GOLT1AQ6ZVE7 132 aa10.56□□□□□ -0.72
USP39-217ENST00000491659 RAB24Q969Q5 203 aa10.56□□□□□ -0.72
USP39-217ENST00000491659 ACTR3CQ9C0K3 210 aaPredicted RBP10.56□□□□□ -0.72
USP39-217ENST00000491659 SH3BGRL3Q9H299 93 aa10.56□□□□□ -0.72
USP39-217ENST00000491659 KLF12Q9Y4X4 402 aa10.56□□□□□ -0.72
USP39-217ENST00000491659 A0A0D9SG52 128 aa10.55□□□□□ -0.72
USP39-217ENST00000491659 A0A0J9YY99 117 aa10.55□□□□□ -0.72
USP39-217ENST00000491659 SPINK4O60575 86 aa10.55□□□□□ -0.72
USP39-217ENST00000491659 HOXA5P20719 270 aa10.55□□□□□ -0.72
USP39-217ENST00000491659 GCHFRP30047 84 aa10.55□□□□□ -0.72
USP39-217ENST00000491659 MUC21Q5SSG8 566 aa10.55□□□□□ -0.72
USP39-217ENST00000491659 Q6AWC8 147 aa10.55□□□□□ -0.72
USP39-217ENST00000491659 RPL7L1Q6DKI1 246 aaKnown RBP10.55□□□□□ -0.72
USP39-217ENST00000491659 Q6ZQT7 251 aa10.55□□□□□ -0.72
USP39-217ENST00000491659 C18orf15Q96N68 181 aa10.55□□□□□ -0.72
USP39-217ENST00000491659 TP53TG3Q9ULZ0 132 aa10.55□□□□□ -0.72
USP39-217ENST00000491659 BIRC6Q9NR09 4857 aa10.55□□□□□ -0.72
USP39-217ENST00000491659 CXorf1O96002 111 aa10.54□□□□□ -0.72
USP39-217ENST00000491659 IFNA7P01567 189 aa10.54□□□□□ -0.72
USP39-217ENST00000491659 GNG5P63218 68 aa10.54□□□□□ -0.72
USP39-217ENST00000491659 FAM159AQ6UWV7 190 aa10.54□□□□□ -0.72
USP39-217ENST00000491659 TMEM167BQ9NRX6 74 aa10.54□□□□□ -0.72
USP39-217ENST00000491659 TRGV11A0A075B6L2 103 aa10.53□□□□□ -0.72
USP39-217ENST00000491659 SERTM2A0A1B0GWG4 89 aa10.53□□□□□ -0.72
USP39-217ENST00000491659 G3V3Q6 166 aa10.53□□□□□ -0.72
USP39-217ENST00000491659 H3BNG1 76 aa10.53□□□□□ -0.72
USP39-217ENST00000491659 K7EQM0 130 aa10.53□□□□□ -0.72
USP39-217ENST00000491659 ARPC5O15511 151 aa10.53□□□□□ -0.72
USP39-217ENST00000491659 SOHLH1Q5JUK2 328 aa10.53□□□□□ -0.72
USP39-217ENST00000491659 Q6ZR54 194 aa10.53□□□□□ -0.72
USP39-217ENST00000491659 TMUB2Q71RG4 321 aa10.53□□□□□ -0.72
USP39-217ENST00000491659 IQCF2Q8IXL9 164 aa10.53□□□□□ -0.72
USP39-217ENST00000491659 C5orf17Q8NAS9 161 aa10.53□□□□□ -0.72
USP39-217ENST00000491659 NDFIP1Q9BT67 221 aa10.53□□□□□ -0.72
USP39-217ENST00000491659 MRPL16Q9NX20 251 aaKnown RBP10.53□□□□□ -0.72
USP39-217ENST00000491659 NAGKQ9UJ70 344 aa10.53□□□□□ -0.72
USP39-217ENST00000491659 TRAV8-1A0A0A6YYK1 113 aa10.52□□□□□ -0.73
USP39-217ENST00000491659 TAAR5O14804 337 aa10.52□□□□□ -0.73
USP39-217ENST00000491659 SUN5Q8TC36 379 aa10.52□□□□□ -0.73
USP39-217ENST00000491659 TREM1Q9NP99 234 aa10.52□□□□□ -0.73
USP39-217ENST00000491659 LINC00588Q9Y4M8 146 aa10.52□□□□□ -0.73
USP39-217ENST00000491659 TRAV21A0A0B4J279 112 aa10.51□□□□□ -0.73
USP39-217ENST00000491659 CTXND1A0A1B0GTU2 59 aa10.51□□□□□ -0.73
USP39-217ENST00000491659 PRSS29PA6NIE9 313 aa10.51□□□□□ -0.73
USP39-217ENST00000491659 F6UZH7 168 aa10.51□□□□□ -0.73
USP39-217ENST00000491659 TCRAP04437 139 aa10.51□□□□□ -0.73
USP39-217ENST00000491659 TMEM183BQ1AE95 376 aa10.51□□□□□ -0.73
USP39-217ENST00000491659 AKR1C8PQ5T2L2 129 aa10.51□□□□□ -0.73
USP39-217ENST00000491659 SSX7Q7RTT5 188 aa10.51□□□□□ -0.73
USP39-217ENST00000491659 TMEM183AQ8IXX5 376 aa10.51□□□□□ -0.73
USP39-217ENST00000491659 ZNRF2Q8NHG8 242 aa10.51□□□□□ -0.73
USP39-217ENST00000491659 KANTRA0A1W2PQU2 76 aa10.5□□□□□ -0.73
USP39-217ENST00000491659 RTL8CO15255 209 aa10.5□□□□□ -0.73
USP39-217ENST00000491659 ATP6V1G1O75348 118 aa10.5□□□□□ -0.73
USP39-217ENST00000491659 RAB14P61106 215 aa10.5□□□□□ -0.73
USP39-217ENST00000491659 TEX261Q6UWH6 196 aa10.5□□□□□ -0.73
USP39-217ENST00000491659 SPXQ9BT56 116 aa10.5□□□□□ -0.73
USP39-217ENST00000491659 IGHV3-53P01767 116 aa10.49□□□□□ -0.73
USP39-217ENST00000491659 SUMO1P63165 101 aaKnown RBP10.49□□□□□ -0.73
USP39-217ENST00000491659 ZNF345Q14585 488 aa10.49□□□□□ -0.73
USP39-217ENST00000491659 TDRG1Q3Y452 100 aa10.49□□□□□ -0.73
USP39-217ENST00000491659 C1orf134Q5TEV5 83 aa10.49□□□□□ -0.73
USP39-217ENST00000491659 CYB561D1Q8N8Q1 229 aa10.49□□□□□ -0.73
USP39-217ENST00000491659 SGK494Q96LW2 274 aa10.49□□□□□ -0.73
USP39-217ENST00000491659 MDFICQ9P1T7 246 aa10.49□□□□□ -0.73
USP39-217ENST00000491659 MUC4Q99102 2169 aa10.49□□□□□ -0.73
USP39-217ENST00000491659 NBDYA0A0U1RRE5 68 aa10.48□□□□□ -0.73
USP39-217ENST00000491659 A0A1W2PRE2 83 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms