RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 TRBV6-4A0A1B0GX49 114 aa4.38□□□□□ -1.71
PDLIM1-203ENST00000490391 CCR6P51684 374 aa4.38□□□□□ -1.71
PDLIM1-203ENST00000490391 RAB11AP62491 216 aa4.38□□□□□ -1.71
PDLIM1-203ENST00000490391 RHOHQ15669 191 aa4.38□□□□□ -1.71
PDLIM1-203ENST00000490391 UBE2NLQ5JXB2 153 aa4.38□□□□□ -1.71
PDLIM1-203ENST00000490391 OR4D10Q8NGI6 311 aa4.38□□□□□ -1.71
PDLIM1-203ENST00000490391 ZFAND1Q8TCF1 268 aa4.38□□□□□ -1.71
PDLIM1-203ENST00000490391 C2orf50Q96LR7 162 aa4.38□□□□□ -1.71
PDLIM1-203ENST00000490391 LINC00477Q96M19 166 aa4.38□□□□□ -1.71
PDLIM1-203ENST00000490391 RTBDNQ9BSG5 229 aaPredicted RBP4.38□□□□□ -1.71
PDLIM1-203ENST00000490391 ARL6Q9H0F7 186 aa4.38□□□□□ -1.71
PDLIM1-203ENST00000490391 ARV1Q9H2C2 271 aa4.38□□□□□ -1.71
PDLIM1-203ENST00000490391 OR51M1Q9H341 326 aa4.38□□□□□ -1.71
PDLIM1-203ENST00000490391 FBLL1A6NHQ2 334 aaKnown RBP4.37□□□□□ -1.71
PDLIM1-203ENST00000490391 ANKRD65E5RJM6 399 aa4.37□□□□□ -1.71
PDLIM1-203ENST00000490391 H7C1H1 209 aa4.37□□□□□ -1.71
PDLIM1-203ENST00000490391 CCSO14618 274 aa4.37□□□□□ -1.71
PDLIM1-203ENST00000490391 ZNF253O75346 499 aa4.37□□□□□ -1.71
PDLIM1-203ENST00000490391 OR10J4P0C629 311 aa4.37□□□□□ -1.71
PDLIM1-203ENST00000490391 IAPPP10997 89 aa4.37□□□□□ -1.71
PDLIM1-203ENST00000490391 AKR1C1Q04828 323 aa4.37□□□□□ -1.71
PDLIM1-203ENST00000490391 SMCO1Q147U7 214 aa4.37□□□□□ -1.71
PDLIM1-203ENST00000490391 TMEM183BQ1AE95 376 aa4.37□□□□□ -1.71
PDLIM1-203ENST00000490391 MUC21Q5SSG8 566 aa4.37□□□□□ -1.71
PDLIM1-203ENST00000490391 BPIFA4PQ86YQ2 179 aa4.37□□□□□ -1.71
PDLIM1-203ENST00000490391 TMEM183AQ8IXX5 376 aa4.37□□□□□ -1.71
PDLIM1-203ENST00000490391 TERB2Q8NHR7 220 aa4.37□□□□□ -1.71
PDLIM1-203ENST00000490391 MARCH1Q8TCQ1 289 aa4.37□□□□□ -1.71
PDLIM1-203ENST00000490391 MRPL53Q96EL3 112 aaKnown RBP4.37□□□□□ -1.71
PDLIM1-203ENST00000490391 PRADC1Q9BSG0 188 aa4.37□□□□□ -1.71
PDLIM1-203ENST00000490391 USH2AO75445 5202 aa4.37□□□□□ -1.71
PDLIM1-203ENST00000490391 K7EPK0 472 aa4.36□□□□□ -1.71
PDLIM1-203ENST00000490391 M0R2P5 195 aa4.36□□□□□ -1.71
PDLIM1-203ENST00000490391 TMEM127O75204 238 aa4.36□□□□□ -1.71
PDLIM1-203ENST00000490391 CD3DP04234 171 aa4.36□□□□□ -1.71
PDLIM1-203ENST00000490391 UBE2MP61081 183 aaKnown RBP4.36□□□□□ -1.71
PDLIM1-203ENST00000490391 SELENOTP62341 195 aa4.36□□□□□ -1.71
PDLIM1-203ENST00000490391 POLR2GP62487 172 aaKnown RBP eCLIP4.36□□□□□ -1.71
PDLIM1-203ENST00000490391 CNBPP62633 177 aaKnown RBP4.36□□□□□ -1.71
PDLIM1-203ENST00000490391 PRR4Q16378 134 aa4.36□□□□□ -1.71
PDLIM1-203ENST00000490391 BAK1Q16611 211 aa4.36□□□□□ -1.71
PDLIM1-203ENST00000490391 RNASE10Q5GAN6 216 aaKnown RBP4.36□□□□□ -1.71
PDLIM1-203ENST00000490391 LINC00305Q7Z4B0 112 aa4.36□□□□□ -1.71
PDLIM1-203ENST00000490391 LYZL2Q7Z4W2 148 aa4.36□□□□□ -1.71
PDLIM1-203ENST00000490391 SAMD12Q8N8I0 201 aa4.36□□□□□ -1.71
PDLIM1-203ENST00000490391 C1orf43Q9BWL3 253 aa4.36□□□□□ -1.71
PDLIM1-203ENST00000490391 SRRQ9GZT4 340 aa4.36□□□□□ -1.71
PDLIM1-203ENST00000490391 PAIP2BQ9ULR5 123 aaKnown RBP4.36□□□□□ -1.71
PDLIM1-203ENST00000490391 A0A0B4J2A0 478 aa4.35□□□□□ -1.71
PDLIM1-203ENST00000490391 MUC21A0A0G2JKD1 596 aa4.35□□□□□ -1.71
PDLIM1-203ENST00000490391 FAM231BA6NCW3 169 aa4.35□□□□□ -1.71
PDLIM1-203ENST00000490391 TAAR5O14804 337 aa4.35□□□□□ -1.71
PDLIM1-203ENST00000490391 TNFAIP8O95379 198 aa4.35□□□□□ -1.71
PDLIM1-203ENST00000490391 SEC11BP0C7V7 166 aa4.35□□□□□ -1.71
PDLIM1-203ENST00000490391 CFAP126Q5VTH2 177 aa4.35□□□□□ -1.71
PDLIM1-203ENST00000490391 ENHOQ6UWT2 76 aa4.35□□□□□ -1.71
PDLIM1-203ENST00000490391 S100A7AQ86SG5 101 aa4.35□□□□□ -1.71
PDLIM1-203ENST00000490391 ZNF546Q86UE3 836 aa4.35□□□□□ -1.71
PDLIM1-203ENST00000490391 OR10G9Q8NGN4 311 aa4.35□□□□□ -1.71
PDLIM1-203ENST00000490391 GTSF1Q8WW33 167 aa4.35□□□□□ -1.71
PDLIM1-203ENST00000490391 ZNF492Q9P255 531 aa4.35□□□□□ -1.71
PDLIM1-203ENST00000490391 Q9UF83 564 aa4.35□□□□□ -1.71
PDLIM1-203ENST00000490391 SHPKQ9UHJ6 478 aa4.35□□□□□ -1.71
PDLIM1-203ENST00000490391 RNF24Q9Y225 148 aa4.35□□□□□ -1.71
PDLIM1-203ENST00000490391 TRGV11A0A075B6L2 103 aa4.34□□□□□ -1.71
PDLIM1-203ENST00000490391 IGKV2-40A0A087WW87 121 aaPredicted RBP4.34□□□□□ -1.71
PDLIM1-203ENST00000490391 A0A087WWC5 75 aa4.34□□□□□ -1.71
PDLIM1-203ENST00000490391 NDUFB4O95168 129 aa4.34□□□□□ -1.71
PDLIM1-203ENST00000490391 IGKV2D-40P01614 121 aaPredicted RBP4.34□□□□□ -1.71
PDLIM1-203ENST00000490391 HLA-DQA1P01909 254 aa4.34□□□□□ -1.71
PDLIM1-203ENST00000490391 AKR1C4P17516 323 aa4.34□□□□□ -1.71
PDLIM1-203ENST00000490391 Q0VG73 95 aa4.34□□□□□ -1.71
PDLIM1-203ENST00000490391 KRTAP26-1Q6PEX3 210 aa4.34□□□□□ -1.71
PDLIM1-203ENST00000490391 SNX29P2Q8IUI4 249 aa4.34□□□□□ -1.71
PDLIM1-203ENST00000490391 CYB561D1Q8N8Q1 229 aa4.34□□□□□ -1.71
PDLIM1-203ENST00000490391 Q8TAT8 98 aa4.34□□□□□ -1.71
PDLIM1-203ENST00000490391 CHCHD7Q9BUK0 85 aa4.34□□□□□ -1.71
PDLIM1-203ENST00000490391 SH3BGRL3Q9H299 93 aa4.34□□□□□ -1.71
PDLIM1-203ENST00000490391 PSORS1C2Q9UIG4 136 aa4.34□□□□□ -1.71
PDLIM1-203ENST00000490391 TRBV19A0A075B6N1 114 aa4.33□□□□□ -1.72
PDLIM1-203ENST00000490391 IGHV3-64A0A075B6Q5 118 aa4.33□□□□□ -1.72
PDLIM1-203ENST00000490391 IGHV3-73A0A0B4J1V6 119 aa4.33□□□□□ -1.72
PDLIM1-203ENST00000490391 TRAV26-2A0A0B4J265 109 aa4.33□□□□□ -1.72
PDLIM1-203ENST00000490391 TRBV7-9A0A0J9YWB2 115 aa4.33□□□□□ -1.72
PDLIM1-203ENST00000490391 C5orf51A6NDU8 294 aa4.33□□□□□ -1.72
PDLIM1-203ENST00000490391 GAGE12JA6NER3 117 aa4.33□□□□□ -1.72
PDLIM1-203ENST00000490391 H3BP45 60 aa4.33□□□□□ -1.72
PDLIM1-203ENST00000490391 TBPP20226 339 aa4.33□□□□□ -1.72
PDLIM1-203ENST00000490391 GAGE1Q13065 139 aa4.33□□□□□ -1.72
PDLIM1-203ENST00000490391 GAGE4Q13068 117 aa4.33□□□□□ -1.72
PDLIM1-203ENST00000490391 GAGE5Q13069 117 aa4.33□□□□□ -1.72
PDLIM1-203ENST00000490391 RAB31Q13636 194 aa4.33□□□□□ -1.72
PDLIM1-203ENST00000490391 ZNF266Q14584 549 aa4.33□□□□□ -1.72
PDLIM1-203ENST00000490391 GUK1Q16774 197 aa4.33□□□□□ -1.72
PDLIM1-203ENST00000490391 SCGB2B2Q4G0G5 96 aa4.33□□□□□ -1.72
PDLIM1-203ENST00000490391 GAGE13Q4V321 117 aa4.33□□□□□ -1.72
PDLIM1-203ENST00000490391 TMEM78Q5T7P6 136 aa4.33□□□□□ -1.72
PDLIM1-203ENST00000490391 PXDC1Q5TGL8 231 aa4.33□□□□□ -1.72
PDLIM1-203ENST00000490391 Q6AWC8 147 aa4.33□□□□□ -1.72
PDLIM1-203ENST00000490391 ZNF664Q8N3J9 261 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms