RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 A0A0J9YY99 117 aa12.21□□□□□ -0.45
SEC13-218ENST00000490283 HMGB3O15347 200 aaKnown RBP12.21□□□□□ -0.45
SEC13-218ENST00000490283 SERF2P84101 59 aa12.21□□□□□ -0.45
SEC13-218ENST00000490283 ZNF415Q09FC8 603 aa12.21□□□□□ -0.45
SEC13-218ENST00000490283 ARL6IP6Q8N6S5 226 aa12.21□□□□□ -0.45
SEC13-218ENST00000490283 TMED6Q8WW62 240 aa12.21□□□□□ -0.45
SEC13-218ENST00000490283 ARL14EPLP0DKL9 152 aa12.2□□□□□ -0.46
SEC13-218ENST00000490283 ATP6V0CP27449 155 aa12.2□□□□□ -0.46
SEC13-218ENST00000490283 GOLT1AQ6ZVE7 132 aa12.2□□□□□ -0.46
SEC13-218ENST00000490283 C18orf15Q96N68 181 aa12.2□□□□□ -0.46
SEC13-218ENST00000490283 KLF12Q9Y4X4 402 aa12.2□□□□□ -0.46
SEC13-218ENST00000490283 PRSS29PA6NIE9 313 aa12.19□□□□□ -0.46
SEC13-218ENST00000490283 H3BNG1 76 aa12.19□□□□□ -0.46
SEC13-218ENST00000490283 SPINK4O60575 86 aa12.19□□□□□ -0.46
SEC13-218ENST00000490283 HOXA5P20719 270 aa12.19□□□□□ -0.46
SEC13-218ENST00000490283 FAM159AQ6UWV7 190 aa12.19□□□□□ -0.46
SEC13-218ENST00000490283 Q6ZR54 194 aa12.19□□□□□ -0.46
SEC13-218ENST00000490283 OR2T35Q8NGX2 323 aa12.19□□□□□ -0.46
SEC13-218ENST00000490283 TP53TG3Q9ULZ0 132 aa12.19□□□□□ -0.46
SEC13-218ENST00000490283 FRAS1Q86XX4 4008 aa12.19□□□□□ -0.46
SEC13-218ENST00000490283 DNAH10Q8IVF4 4471 aa12.18□□□□□ -0.46
SEC13-218ENST00000490283 TRGV11A0A075B6L2 103 aa12.18□□□□□ -0.46
SEC13-218ENST00000490283 K7EQM0 130 aa12.18□□□□□ -0.46
SEC13-218ENST00000490283 STAG3L2P0CL84 134 aa12.18□□□□□ -0.46
SEC13-218ENST00000490283 STAG3L3P0CL85 134 aa12.18□□□□□ -0.46
SEC13-218ENST00000490283 Q5BKY6 102 aa12.18□□□□□ -0.46
SEC13-218ENST00000490283 MUC21Q5SSG8 566 aa12.18□□□□□ -0.46
SEC13-218ENST00000490283 C1orf134Q5TEV5 83 aa12.18□□□□□ -0.46
SEC13-218ENST00000490283 Q6AWC8 147 aa12.18□□□□□ -0.46
SEC13-218ENST00000490283 SSX7Q7RTT5 188 aa12.18□□□□□ -0.46
SEC13-218ENST00000490283 RAB24Q969Q5 203 aa12.18□□□□□ -0.46
SEC13-218ENST00000490283 NDFIP1Q9BT67 221 aa12.18□□□□□ -0.46
SEC13-218ENST00000490283 ACTR3CQ9C0K3 210 aaPredicted RBP12.18□□□□□ -0.46
SEC13-218ENST00000490283 SERTM2A0A1B0GWG4 89 aa12.17□□□□□ -0.46
SEC13-218ENST00000490283 RTL8CO15255 209 aa12.17□□□□□ -0.46
SEC13-218ENST00000490283 ZNRF2Q8NHG8 242 aa12.17□□□□□ -0.46
SEC13-218ENST00000490283 ST6GAL2Q96JF0 529 aa12.17□□□□□ -0.46
SEC13-218ENST00000490283 TMEM167BQ9NRX6 74 aa12.17□□□□□ -0.46
SEC13-218ENST00000490283 MRPL16Q9NX20 251 aaKnown RBP12.17□□□□□ -0.46
SEC13-218ENST00000490283 NAGKQ9UJ70 344 aa12.17□□□□□ -0.46
SEC13-218ENST00000490283 TNFSF18Q9UNG2 199 aa12.17□□□□□ -0.46
SEC13-218ENST00000490283 LINC00588Q9Y4M8 146 aa12.17□□□□□ -0.46
SEC13-218ENST00000490283 CXorf1O96002 111 aa12.16□□□□□ -0.46
SEC13-218ENST00000490283 GCHFRP30047 84 aa12.16□□□□□ -0.46
SEC13-218ENST00000490283 Q6ZQT7 251 aa12.16□□□□□ -0.46
SEC13-218ENST00000490283 IQCF2Q8IXL9 164 aa12.16□□□□□ -0.46
SEC13-218ENST00000490283 C5orf17Q8NAS9 161 aa12.16□□□□□ -0.46
SEC13-218ENST00000490283 SH3BGRL3Q9H299 93 aa12.16□□□□□ -0.46
SEC13-218ENST00000490283 TREM1Q9NP99 234 aa12.16□□□□□ -0.46
SEC13-218ENST00000490283 TRAV21A0A0B4J279 112 aa12.15□□□□□ -0.46
SEC13-218ENST00000490283 NBDYA0A0U1RRE5 68 aa12.15□□□□□ -0.46
SEC13-218ENST00000490283 RNF222A6NCQ9 220 aa12.15□□□□□ -0.46
SEC13-218ENST00000490283 GNG5P63218 68 aa12.15□□□□□ -0.46
SEC13-218ENST00000490283 SLAQ13239 276 aa12.15□□□□□ -0.46
SEC13-218ENST00000490283 TMEM183BQ1AE95 376 aa12.15□□□□□ -0.46
SEC13-218ENST00000490283 RPL7L1Q6DKI1 246 aaKnown RBP12.15□□□□□ -0.46
SEC13-218ENST00000490283 TMEM183AQ8IXX5 376 aa12.15□□□□□ -0.46
SEC13-218ENST00000490283 SPXQ9BT56 116 aa12.14□□□□□ -0.47
SEC13-218ENST00000490283 TRAV8-1A0A0A6YYK1 113 aa12.13□□□□□ -0.47
SEC13-218ENST00000490283 F6UZH7 168 aa12.13□□□□□ -0.47
SEC13-218ENST00000490283 TAAR5O14804 337 aa12.13□□□□□ -0.47
SEC13-218ENST00000490283 PAX4O43316 350 aa12.13□□□□□ -0.47
SEC13-218ENST00000490283 IGHV3-53P01767 116 aa12.13□□□□□ -0.47
SEC13-218ENST00000490283 TTC32Q5I0X7 151 aa12.13□□□□□ -0.47
SEC13-218ENST00000490283 ICOSQ9Y6W8 199 aa12.13□□□□□ -0.47
SEC13-218ENST00000490283 TCRAP04437 139 aa12.12□□□□□ -0.47
SEC13-218ENST00000490283 ZFP69Q49AA0 526 aa12.12□□□□□ -0.47
SEC13-218ENST00000490283 AKR1C8PQ5T2L2 129 aa12.12□□□□□ -0.47
SEC13-218ENST00000490283 SUN5Q8TC36 379 aa12.12□□□□□ -0.47
SEC13-218ENST00000490283 KCNS1Q96KK3 526 aa12.12□□□□□ -0.47
SEC13-218ENST00000490283 Q9H8V8 135 aa12.12□□□□□ -0.47
SEC13-218ENST00000490283 SDF2L1Q9HCN8 221 aa12.12□□□□□ -0.47
SEC13-218ENST00000490283 MDFICQ9P1T7 246 aa12.12□□□□□ -0.47
SEC13-218ENST00000490283 PRO0255Q9UI72 69 aa12.12□□□□□ -0.47
SEC13-218ENST00000490283 NACAE9PAV3 2078 aa12.12□□□□□ -0.47
SEC13-218ENST00000490283 TRGV4A0A0C4DH28 118 aa12.11□□□□□ -0.47
SEC13-218ENST00000490283 CTXND1A0A1B0GTU2 59 aa12.11□□□□□ -0.47
SEC13-218ENST00000490283 FBLL1A6NHQ2 334 aaKnown RBP12.11□□□□□ -0.47
SEC13-218ENST00000490283 ARPC5O15511 151 aa12.11□□□□□ -0.47
SEC13-218ENST00000490283 SUMO1P63165 101 aaKnown RBP12.11□□□□□ -0.47
SEC13-218ENST00000490283 TDRG1Q3Y452 100 aa12.11□□□□□ -0.47
SEC13-218ENST00000490283 C6orf223Q8N319 242 aa12.11□□□□□ -0.47
SEC13-218ENST00000490283 VSIG2Q96IQ7 327 aa12.11□□□□□ -0.47
SEC13-218ENST00000490283 MRPS16Q9Y3D3 137 aaKnown RBP12.11□□□□□ -0.47
SEC13-218ENST00000490283 HECTD4Q9Y4D8 3996 aa12.11□□□□□ -0.47
SEC13-218ENST00000490283 A0A096LPF7 62 aa12.1□□□□□ -0.47
SEC13-218ENST00000490283 A0A1B0GVY2 172 aa12.1□□□□□ -0.47
SEC13-218ENST00000490283 ESRGQ1W209 222 aa12.1□□□□□ -0.47
SEC13-218ENST00000490283 CYB561D1Q8N8Q1 229 aa12.1□□□□□ -0.47
SEC13-218ENST00000490283 SGK494Q96LW2 274 aa12.1□□□□□ -0.47
SEC13-218ENST00000490283 UPK3BQ9BT76 320 aa12.1□□□□□ -0.47
SEC13-218ENST00000490283 EPDR1Q9UM22 224 aa12.1□□□□□ -0.47
SEC13-218ENST00000490283 HHLA3Q9XRX5 114 aa12.1□□□□□ -0.47
SEC13-218ENST00000490283 A0A1W2PRE2 83 aa12.09□□□□□ -0.47
SEC13-218ENST00000490283 GGTLC3B5MD39 225 aa12.09□□□□□ -0.47
SEC13-218ENST00000490283 RASL10AQ92737 203 aa12.09□□□□□ -0.47
SEC13-218ENST00000490283 TVP23CQ96ET8 276 aa12.09□□□□□ -0.47
SEC13-218ENST00000490283 C8orf49Q96NF6 230 aa12.09□□□□□ -0.47
SEC13-218ENST00000490283 PSG8Q9UQ74 426 aa12.09□□□□□ -0.47
SEC13-218ENST00000490283 M0R2P5 195 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms