RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 PYGO2Q9BRQ0 406 aa6.79□□□□□ -1.32
TMEM39A-210ENST00000490099 SLC25A2Q9BXI2 301 aa6.79□□□□□ -1.32
TMEM39A-210ENST00000490099 AGPAT4-IT1Q9H0P7 198 aa6.79□□□□□ -1.32
TMEM39A-210ENST00000490099 SH3BGRL3Q9H299 93 aa6.79□□□□□ -1.32
TMEM39A-210ENST00000490099 NOP10Q9NPE3 64 aaKnown RBP6.79□□□□□ -1.32
TMEM39A-210ENST00000490099 PRSS29PA6NIE9 313 aa6.78□□□□□ -1.32
TMEM39A-210ENST00000490099 H3BNG1 76 aa6.78□□□□□ -1.32
TMEM39A-210ENST00000490099 PYYP10082 97 aa6.78□□□□□ -1.32
TMEM39A-210ENST00000490099 HTN1P15515 57 aa6.78□□□□□ -1.32
TMEM39A-210ENST00000490099 SULT1A2P50226 295 aa6.78□□□□□ -1.32
TMEM39A-210ENST00000490099 RAB14P61106 215 aa6.78□□□□□ -1.32
TMEM39A-210ENST00000490099 UBE2DNLQ8IWF7 75 aa6.78□□□□□ -1.32
TMEM39A-210ENST00000490099 C11orf72Q8NBR9 251 aa6.78□□□□□ -1.32
TMEM39A-210ENST00000490099 IGLV2-18A0A075B6J9 118 aa6.77□□□□□ -1.33
TMEM39A-210ENST00000490099 TRAV12-3A0A0B4J271 114 aa6.77□□□□□ -1.33
TMEM39A-210ENST00000490099 TRBV7-9A0A0J9YWB2 115 aa6.77□□□□□ -1.33
TMEM39A-210ENST00000490099 A0A1W2PPV4 95 aa6.77□□□□□ -1.33
TMEM39A-210ENST00000490099 TEX46H3BTG2 121 aa6.77□□□□□ -1.33
TMEM39A-210ENST00000490099 NBEAP1P0C6P0 100 aa6.77□□□□□ -1.33
TMEM39A-210ENST00000490099 HOXA5P20719 270 aa6.77□□□□□ -1.33
TMEM39A-210ENST00000490099 RAB2AP61019 212 aa6.77□□□□□ -1.33
TMEM39A-210ENST00000490099 BLOC1S1P78537 153 aa6.77□□□□□ -1.33
TMEM39A-210ENST00000490099 ANXA2RQ3ZCQ2 193 aa6.77□□□□□ -1.33
TMEM39A-210ENST00000490099 MIR17HGQ75NE6 70 aa6.77□□□□□ -1.33
TMEM39A-210ENST00000490099 CCDC28AQ8IWP9 274 aa6.77□□□□□ -1.33
TMEM39A-210ENST00000490099 EXOC3-AS1Q8N2X6 119 aa6.77□□□□□ -1.33
TMEM39A-210ENST00000490099 ZFAND2AQ8N6M9 145 aa6.77□□□□□ -1.33
TMEM39A-210ENST00000490099 OR10G4Q8NGN3 311 aa6.77□□□□□ -1.33
TMEM39A-210ENST00000490099 OR10G9Q8NGN4 311 aa6.77□□□□□ -1.33
TMEM39A-210ENST00000490099 OR10G7Q8NGN6 311 aa6.77□□□□□ -1.33
TMEM39A-210ENST00000490099 FXYD5Q96DB9 178 aa6.77□□□□□ -1.33
TMEM39A-210ENST00000490099 MRPL32Q9BYC8 188 aaKnown RBP6.77□□□□□ -1.33
TMEM39A-210ENST00000490099 ACTR3CQ9C0K3 210 aaPredicted RBP6.77□□□□□ -1.33
TMEM39A-210ENST00000490099 C7orf71A4D174 169 aa6.76□□□□□ -1.33
TMEM39A-210ENST00000490099 RGS13O14921 159 aa6.76□□□□□ -1.33
TMEM39A-210ENST00000490099 CDC34P49427 236 aaPredicted RBP6.76□□□□□ -1.33
TMEM39A-210ENST00000490099 TAS2R45P59539 299 aa6.76□□□□□ -1.33
TMEM39A-210ENST00000490099 ERCC8Q13216 396 aa6.76□□□□□ -1.33
TMEM39A-210ENST00000490099 C1orf134Q5TEV5 83 aa6.76□□□□□ -1.33
TMEM39A-210ENST00000490099 FAM213BQ8TBF2 198 aa6.76□□□□□ -1.33
TMEM39A-210ENST00000490099 RXFP4Q8TDU9 374 aa6.76□□□□□ -1.33
TMEM39A-210ENST00000490099 VGLL1Q99990 258 aa6.76□□□□□ -1.33
TMEM39A-210ENST00000490099 OR51M1Q9H341 326 aa6.76□□□□□ -1.33
TMEM39A-210ENST00000490099 FUT9Q9Y231 359 aa6.76□□□□□ -1.33
TMEM39A-210ENST00000490099 LINC00588Q9Y4M8 146 aa6.76□□□□□ -1.33
TMEM39A-210ENST00000490099 DNAH11Q96DT5 4516 aa6.76□□□□□ -1.33
TMEM39A-210ENST00000490099 MUC4Q99102 2169 aa6.75□□□□□ -1.33
TMEM39A-210ENST00000490099 PKD1P98161 4303 aa6.75□□□□□ -1.33
TMEM39A-210ENST00000490099 NBDYA0A0U1RRE5 68 aa6.75□□□□□ -1.33
TMEM39A-210ENST00000490099 CTXND1A0A1B0GTU2 59 aa6.75□□□□□ -1.33
TMEM39A-210ENST00000490099 MED14OSP0DP75 135 aa6.75□□□□□ -1.33
TMEM39A-210ENST00000490099 CCL18P55774 89 aa6.75□□□□□ -1.33
TMEM39A-210ENST00000490099 IFITM2Q01629 132 aa6.75□□□□□ -1.33
TMEM39A-210ENST00000490099 ICAM4Q14773 271 aa6.75□□□□□ -1.33
TMEM39A-210ENST00000490099 KHDC3LQ587J8 217 aa6.75□□□□□ -1.33
TMEM39A-210ENST00000490099 FAM74A1Q5RGS3 127 aa6.75□□□□□ -1.33
TMEM39A-210ENST00000490099 FAM122CQ6P4D5 195 aa6.75□□□□□ -1.33
TMEM39A-210ENST00000490099 LYPD1Q8N2G4 141 aa6.75□□□□□ -1.33
TMEM39A-210ENST00000490099 AAMDCQ9H7C9 122 aa6.75□□□□□ -1.33
TMEM39A-210ENST00000490099 ZNF492Q9P255 531 aa6.75□□□□□ -1.33
TMEM39A-210ENST00000490099 PKHD1P08F94 4074 aa6.75□□□□□ -1.33
TMEM39A-210ENST00000490099 DYNC1H1Q14204 4646 aaKnown RBP6.74□□□□□ -1.33
TMEM39A-210ENST00000490099 TRAV26-1A0A087WT03 109 aa6.74□□□□□ -1.33
TMEM39A-210ENST00000490099 GAGE12BA1L429 117 aa6.74□□□□□ -1.33
TMEM39A-210ENST00000490099 RBAKDNA6NC62 111 aa6.74□□□□□ -1.33
TMEM39A-210ENST00000490099 GAGE7O76087 117 aa6.74□□□□□ -1.33
TMEM39A-210ENST00000490099 NUDT3O95989 172 aa6.74□□□□□ -1.33
TMEM39A-210ENST00000490099 GAGE12FP0CL80 117 aa6.74□□□□□ -1.33
TMEM39A-210ENST00000490099 GAGE12GP0CL81 117 aa6.74□□□□□ -1.33
TMEM39A-210ENST00000490099 GAGE12IP0CL82 117 aa6.74□□□□□ -1.33
TMEM39A-210ENST00000490099 SOHLH1Q5JUK2 328 aa6.74□□□□□ -1.33
TMEM39A-210ENST00000490099 IBA57Q5T440 356 aaKnown RBP6.74□□□□□ -1.33
TMEM39A-210ENST00000490099 PRR9Q5T870 116 aa6.74□□□□□ -1.33
TMEM39A-210ENST00000490099 Q6ZTI0 123 aa6.74□□□□□ -1.33
TMEM39A-210ENST00000490099 EIF4E3Q8N5X7 224 aaKnown RBP6.74□□□□□ -1.33
TMEM39A-210ENST00000490099 BLNKQ8WV28 456 aa6.74□□□□□ -1.33
TMEM39A-210ENST00000490099 ATG101Q9BSB4 218 aa6.74□□□□□ -1.33
TMEM39A-210ENST00000490099 UPK3BQ9BT76 320 aa6.74□□□□□ -1.33
TMEM39A-210ENST00000490099 PAXXQ9BUH6 204 aa6.74□□□□□ -1.33
TMEM39A-210ENST00000490099 GSN-AS1Q9NRJ2 163 aa6.74□□□□□ -1.33
TMEM39A-210ENST00000490099 IGKV2-40A0A087WW87 121 aaPredicted RBP6.73□□□□□ -1.33
TMEM39A-210ENST00000490099 MAP1LC3B2A6NCE7 125 aa6.73□□□□□ -1.33
TMEM39A-210ENST00000490099 SNURFLB1AK76 121 aa6.73□□□□□ -1.33
TMEM39A-210ENST00000490099 J3KRW8 73 aa6.73□□□□□ -1.33
TMEM39A-210ENST00000490099 SPINK4O60575 86 aa6.73□□□□□ -1.33
TMEM39A-210ENST00000490099 CXorf1O96002 111 aa6.73□□□□□ -1.33
TMEM39A-210ENST00000490099 IGKV2D-40P01614 121 aaPredicted RBP6.73□□□□□ -1.33
TMEM39A-210ENST00000490099 RNASE4P34096 147 aaKnown RBP6.73□□□□□ -1.33
TMEM39A-210ENST00000490099 PPT1P50897 306 aa6.73□□□□□ -1.33
TMEM39A-210ENST00000490099 ZNF138P52744 262 aa6.73□□□□□ -1.33
TMEM39A-210ENST00000490099 TCL1AP56279 114 aa6.73□□□□□ -1.33
TMEM39A-210ENST00000490099 BTN1A1Q13410 526 aa6.73□□□□□ -1.33
TMEM39A-210ENST00000490099 OR5I1Q13606 314 aa6.73□□□□□ -1.33
TMEM39A-210ENST00000490099 ESRGQ1W209 222 aa6.73□□□□□ -1.33
TMEM39A-210ENST00000490099 CLLU1Q5K131 121 aa6.73□□□□□ -1.33
TMEM39A-210ENST00000490099 PQLC2Q6ZP29 291 aa6.73□□□□□ -1.33
TMEM39A-210ENST00000490099 Q6ZQT7 251 aa6.73□□□□□ -1.33
TMEM39A-210ENST00000490099 SSX7Q7RTT5 188 aa6.73□□□□□ -1.33
TMEM39A-210ENST00000490099 ARL6IP6Q8N6S5 226 aa6.73□□□□□ -1.33
TMEM39A-210ENST00000490099 MBD3L1Q8WWY6 194 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms