RNA–Protein interactions for RNA: ENST00000489144.5

POLR2J3-205, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 2,553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-205ENST00000489144 ANXA2RQ3ZCQ2 193 aa14.27□□□□□ -0.13
POLR2J3-205ENST00000489144 MIC13Q5XKP0 118 aa14.27□□□□□ -0.13
POLR2J3-205ENST00000489144 MGST2Q99735 147 aa14.27□□□□□ -0.13
POLR2J3-205ENST00000489144 NOTCH2Q04721 2471 aa14.26□□□□□ -0.13
POLR2J3-205ENST00000489144 AVPP01185 164 aa14.26□□□□□ -0.13
POLR2J3-205ENST00000489144 GCSHP23434 173 aa14.26□□□□□ -0.13
POLR2J3-205ENST00000489144 RPL27AP46776 148 aaKnown RBP14.26□□□□□ -0.13
POLR2J3-205ENST00000489144 CAMPP49913 170 aa14.26□□□□□ -0.13
POLR2J3-205ENST00000489144 ITPR3Q14573 2671 aa14.26□□□□□ -0.13
POLR2J3-205ENST00000489144 IGLL5B9A064 214 aa14.26□□□□□ -0.13
POLR2J3-205ENST00000489144 SCGB2A1O75556 95 aa14.26□□□□□ -0.13
POLR2J3-205ENST00000489144 MOSP00540 346 aa14.26□□□□□ -0.13
POLR2J3-205ENST00000489144 UBE2E1P51965 193 aa14.26□□□□□ -0.13
POLR2J3-205ENST00000489144 ATP5L2Q7Z4Y8 100 aa14.26□□□□□ -0.13
POLR2J3-205ENST00000489144 K7ERJ3 54 aa14.25□□□□□ -0.13
POLR2J3-205ENST00000489144 NPFFO15130 113 aa14.25□□□□□ -0.13
POLR2J3-205ENST00000489144 FOXA3P55318 350 aaPredicted RBP14.25□□□□□ -0.13
POLR2J3-205ENST00000489144 TM4SF20Q53R12 229 aa14.25□□□□□ -0.13
POLR2J3-205ENST00000489144 TMEM219Q86XT9 240 aa14.25□□□□□ -0.13
POLR2J3-205ENST00000489144 BCL6BQ8N143 479 aaPredicted RBP14.25□□□□□ -0.13
POLR2J3-205ENST00000489144 C7orf69Q9H7B7 122 aa14.25□□□□□ -0.13
POLR2J3-205ENST00000489144 MRPL36Q9P0J6 103 aaKnown RBP14.25□□□□□ -0.13
POLR2J3-205ENST00000489144 NBR2O15453 112 aa14.25□□□□□ -0.13
POLR2J3-205ENST00000489144 ERHP84090 104 aaKnown RBP14.25□□□□□ -0.13
POLR2J3-205ENST00000489144 MXRA5Q9NR99 2828 aa14.24□□□□□ -0.13
POLR2J3-205ENST00000489144 IGKV1OR2-108A0A075B7D4 117 aa14.24□□□□□ -0.13
POLR2J3-205ENST00000489144 MSMBP08118 114 aa14.24□□□□□ -0.13
POLR2J3-205ENST00000489144 SRD5A1P18405 259 aa14.24□□□□□ -0.13
POLR2J3-205ENST00000489144 NDUFV3P56181 108 aaKnown RBP14.24□□□□□ -0.13
POLR2J3-205ENST00000489144 PAX8Q06710 450 aa14.24□□□□□ -0.13
POLR2J3-205ENST00000489144 KLF17Q5JT82 389 aaPredicted RBP14.24□□□□□ -0.13
POLR2J3-205ENST00000489144 SRSF12Q8WXF0 261 aaKnown RBP14.24□□□□□ -0.13
POLR2J3-205ENST00000489144 UNC79Q9P2D8 2635 aa14.24□□□□□ -0.13
POLR2J3-205ENST00000489144 MPDU1O75352 247 aa14.24□□□□□ -0.13
POLR2J3-205ENST00000489144 ZNF747Q9BV97 191 aa14.24□□□□□ -0.13
POLR2J3-205ENST00000489144 S4R3C0 116 aa14.24□□□□□ -0.13
POLR2J3-205ENST00000489144 RHODO00212 210 aa14.23□□□□□ -0.13
POLR2J3-205ENST00000489144 NCR2O95944 276 aa14.23□□□□□ -0.13
POLR2J3-205ENST00000489144 A0A1B0GXF2 115 aa14.23□□□□□ -0.13
POLR2J3-205ENST00000489144 TEX22C9J3V5 150 aa14.23□□□□□ -0.13
POLR2J3-205ENST00000489144 NDPQ00604 133 aa14.23□□□□□ -0.13
POLR2J3-205ENST00000489144 AMTNQ6UX39 209 aa14.22□□□□□ -0.13
POLR2J3-205ENST00000489144 SONP18583 2426 aaKnown RBP14.22□□□□□ -0.13
POLR2J3-205ENST00000489144 FLNAP21333 2647 aaKnown RBP14.22□□□□□ -0.13
POLR2J3-205ENST00000489144 GLMPQ8WWB7 406 aa14.22□□□□□ -0.13
POLR2J3-205ENST00000489144 ZNF355PQ9NSJ1 428 aa14.22□□□□□ -0.13
POLR2J3-205ENST00000489144 A8MWL6 223 aa14.21□□□□□ -0.13
POLR2J3-205ENST00000489144 C2orf83Q53S99 150 aa14.21□□□□□ -0.13
POLR2J3-205ENST00000489144 IGF2BP2-AS1Q96M15 143 aa14.21□□□□□ -0.13
POLR2J3-205ENST00000489144 DEFB113Q30KQ7 82 aa14.21□□□□□ -0.14
POLR2J3-205ENST00000489144 MINOS1Q5TGZ0 78 aa14.21□□□□□ -0.14
POLR2J3-205ENST00000489144 NFE4Q86UQ8 179 aa14.21□□□□□ -0.14
POLR2J3-205ENST00000489144 NHP2Q9NX24 153 aaKnown RBP14.21□□□□□ -0.14
POLR2J3-205ENST00000489144 F11RQ9Y624 299 aaKnown RBP14.21□□□□□ -0.14
POLR2J3-205ENST00000489144 MINOS1-NBL1R4GNA1 71 aa14.21□□□□□ -0.14
POLR2J3-205ENST00000489144 PDZD2O15018 2839 aa14.2□□□□□ -0.14
POLR2J3-205ENST00000489144 FNDC10F2Z333 226 aa14.2□□□□□ -0.14
POLR2J3-205ENST00000489144 PPIFP30405 207 aaKnown RBP14.2□□□□□ -0.14
POLR2J3-205ENST00000489144 FAM231DQ6ZW35 169 aa14.2□□□□□ -0.14
POLR2J3-205ENST00000489144 PSMG3-AS1Q96PY0 264 aa14.2□□□□□ -0.14
POLR2J3-205ENST00000489144 HIGD1BQ9P298 99 aa14.2□□□□□ -0.14
POLR2J3-205ENST00000489144 ACANP16112 2415 aa14.2□□□□□ -0.14
POLR2J3-205ENST00000489144 TRAV5A0A0B4J249 113 aa14.2□□□□□ -0.14
POLR2J3-205ENST00000489144 SLC25A5P05141 298 aaKnown RBP14.2□□□□□ -0.14
POLR2J3-205ENST00000489144 LY6EQ16553 131 aa14.2□□□□□ -0.14
POLR2J3-205ENST00000489144 PCP2Q8IVA1 136 aa14.2□□□□□ -0.14
POLR2J3-205ENST00000489144 A0A096LNT2 108 aa14.19□□□□□ -0.14
POLR2J3-205ENST00000489144 IGHV1-69DA0A0B4J2H0 117 aa14.19□□□□□ -0.14
POLR2J3-205ENST00000489144 TGFAP01135 160 aa14.19□□□□□ -0.14
POLR2J3-205ENST00000489144 IGHV1-69P01742 117 aa14.19□□□□□ -0.14
POLR2J3-205ENST00000489144 NPIPB3Q92617 1050 aa14.19□□□□□ -0.14
POLR2J3-205ENST00000489144 Q96MF0 132 aa14.19□□□□□ -0.14
POLR2J3-205ENST00000489144 TMUB1Q9BVT8 246 aa14.19□□□□□ -0.14
POLR2J3-205ENST00000489144 MAP1LC3AQ9H492 121 aa14.19□□□□□ -0.14
POLR2J3-205ENST00000489144 TIMM8BQ9Y5J9 83 aaPredicted RBP14.19□□□□□ -0.14
POLR2J3-205ENST00000489144 CUBNO60494 3623 aa14.19□□□□□ -0.14
POLR2J3-205ENST00000489144 HIGD1CA8MV81 97 aa14.19□□□□□ -0.14
POLR2J3-205ENST00000489144 CD69Q07108 199 aa14.19□□□□□ -0.14
POLR2J3-205ENST00000489144 SLC25A33Q9BSK2 321 aa14.19□□□□□ -0.14
POLR2J3-205ENST00000489144 LSM4Q9Y4Z0 139 aaKnown RBP14.19□□□□□ -0.14
POLR2J3-205ENST00000489144 HBBP68871 147 aa14.18□□□□□ -0.14
POLR2J3-205ENST00000489144 CR1P17927 2039 aa14.18□□□□□ -0.14
POLR2J3-205ENST00000489144 TRBV20-1A0A075B6N2 111 aa14.18□□□□□ -0.14
POLR2J3-205ENST00000489144 TCRBV4S1A1TA0A5B7 111 aa14.18□□□□□ -0.14
POLR2J3-205ENST00000489144 LINC01548A6NM66 108 aa14.18□□□□□ -0.14
POLR2J3-205ENST00000489144 B4DSR2 109 aa14.18□□□□□ -0.14
POLR2J3-205ENST00000489144 ZNF138P52744 262 aa14.18□□□□□ -0.14
POLR2J3-205ENST00000489144 TMEM126AQ9H061 195 aa14.18□□□□□ -0.14
POLR2J3-205ENST00000489144 NDUFA3O95167 84 aa14.17□□□□□ -0.14
POLR2J3-205ENST00000489144 LGALS9BQ3B8N2 356 aa14.17□□□□□ -0.14
POLR2J3-205ENST00000489144 LGALS9CQ6DKI2 356 aa14.17□□□□□ -0.14
POLR2J3-205ENST00000489144 DAZAP1Q96EP5 407 aaKnown RBP14.17□□□□□ -0.14
POLR2J3-205ENST00000489144 AKAP9Q99996 3911 aa14.17□□□□□ -0.14
POLR2J3-205ENST00000489144 NMUP48645 174 aa14.17□□□□□ -0.14
POLR2J3-205ENST00000489144 Q8N6K4 173 aa14.17□□□□□ -0.14
POLR2J3-205ENST00000489144 NPBQ8NG41 125 aa14.17□□□□□ -0.14
POLR2J3-205ENST00000489144 LINC00527Q9UJ94 153 aa14.17□□□□□ -0.14
POLR2J3-205ENST00000489144 FAM106CPP0CH98 169 aa14.16□□□□□ -0.14
POLR2J3-205ENST00000489144 IFITM1P13164 125 aa14.16□□□□□ -0.14
POLR2J3-205ENST00000489144 TCTAP57738 103 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms