RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 ARL14EPLP0DKL9 152 aa17.42■□□□□ 0.38
HMGN1-217ENST00000489072 CDC34P49427 236 aaPredicted RBP17.42■□□□□ 0.38
HMGN1-217ENST00000489072 FAM3BP58499 235 aaPredicted RBP17.42■□□□□ 0.38
HMGN1-217ENST00000489072 RGS21Q2M5E4 152 aa17.42■□□□□ 0.38
HMGN1-217ENST00000489072 IBA57Q5T440 356 aaKnown RBP17.42■□□□□ 0.38
HMGN1-217ENST00000489072 SH3BGRL3Q9H299 93 aa17.42■□□□□ 0.38
HMGN1-217ENST00000489072 RPH3ALQ9UNE2 315 aa17.42■□□□□ 0.38
HMGN1-217ENST00000489072 TRGV1A0A0A0MS02 117 aa17.41■□□□□ 0.38
HMGN1-217ENST00000489072 A0A0J9YY99 117 aa17.41■□□□□ 0.38
HMGN1-217ENST00000489072 SPINK4O60575 86 aa17.41■□□□□ 0.38
HMGN1-217ENST00000489072 GNPNAT1Q96EK6 184 aaPredicted RBP17.41■□□□□ 0.38
HMGN1-217ENST00000489072 LENEPQ9Y5L5 61 aa17.41■□□□□ 0.38
HMGN1-217ENST00000489072 FXYD6-FXYD2A0A087WZ82 144 aa17.4■□□□□ 0.38
HMGN1-217ENST00000489072 STAG3L2P0CL84 134 aa17.4■□□□□ 0.38
HMGN1-217ENST00000489072 STAG3L3P0CL85 134 aa17.4■□□□□ 0.38
HMGN1-217ENST00000489072 CMTM2Q8TAZ6 248 aa17.4■□□□□ 0.38
HMGN1-217ENST00000489072 TMED6Q8WW62 240 aa17.4■□□□□ 0.38
HMGN1-217ENST00000489072 RAB24Q969Q5 203 aa17.4■□□□□ 0.38
HMGN1-217ENST00000489072 C18orf15Q96N68 181 aa17.4■□□□□ 0.38
HMGN1-217ENST00000489072 TNFSF18Q9UNG2 199 aa17.4■□□□□ 0.38
HMGN1-217ENST00000489072 LINC00588Q9Y4M8 146 aa17.4■□□□□ 0.38
HMGN1-217ENST00000489072 TRGV2A0A075B6R0 118 aa17.39■□□□□ 0.37
HMGN1-217ENST00000489072 G3V3Q6 166 aa17.39■□□□□ 0.37
HMGN1-217ENST00000489072 FAM74A1Q5RGS3 127 aa17.39■□□□□ 0.37
HMGN1-217ENST00000489072 MUC21Q5SSG8 566 aa17.39■□□□□ 0.37
HMGN1-217ENST00000489072 Q6AWC8 147 aa17.39■□□□□ 0.37
HMGN1-217ENST00000489072 RPL7L1Q6DKI1 246 aaKnown RBP17.39■□□□□ 0.37
HMGN1-217ENST00000489072 GOLT1AQ6ZVE7 132 aa17.39■□□□□ 0.37
HMGN1-217ENST00000489072 INO80EQ8NBZ0 244 aaPredicted RBP17.39■□□□□ 0.37
HMGN1-217ENST00000489072 OR2T35Q8NGX2 323 aa17.39■□□□□ 0.37
HMGN1-217ENST00000489072 ZNRF2Q8NHG8 242 aa17.39■□□□□ 0.37
HMGN1-217ENST00000489072 PKHD1P08F94 4074 aa17.39■□□□□ 0.37
HMGN1-217ENST00000489072 GNG5P63218 68 aa17.38■□□□□ 0.37
HMGN1-217ENST00000489072 SERF2P84101 59 aa17.38■□□□□ 0.37
HMGN1-217ENST00000489072 ARL6IP6Q8N6S5 226 aa17.38■□□□□ 0.37
HMGN1-217ENST00000489072 ARPC5LQ9BPX5 153 aa17.38■□□□□ 0.37
HMGN1-217ENST00000489072 TRAV8-1A0A0A6YYK1 113 aa17.37■□□□□ 0.37
HMGN1-217ENST00000489072 A0A1B0GVY2 172 aa17.37■□□□□ 0.37
HMGN1-217ENST00000489072 CCL18P55774 89 aa17.37■□□□□ 0.37
HMGN1-217ENST00000489072 SUN5Q8TC36 379 aa17.37■□□□□ 0.37
HMGN1-217ENST00000489072 MRPL16Q9NX20 251 aaKnown RBP17.37■□□□□ 0.37
HMGN1-217ENST00000489072 PKD1P98161 4303 aa17.36■□□□□ 0.37
HMGN1-217ENST00000489072 PRSS29PA6NIE9 313 aa17.36■□□□□ 0.37
HMGN1-217ENST00000489072 MBP02144 154 aa17.36■□□□□ 0.37
HMGN1-217ENST00000489072 GCHFRP30047 84 aa17.36■□□□□ 0.37
HMGN1-217ENST00000489072 SSX7Q7RTT5 188 aa17.36■□□□□ 0.37
HMGN1-217ENST00000489072 TVP23CQ96ET8 276 aa17.36■□□□□ 0.37
HMGN1-217ENST00000489072 VSIG2Q96IQ7 327 aa17.36■□□□□ 0.37
HMGN1-217ENST00000489072 H3BNG1 76 aa17.35■□□□□ 0.37
HMGN1-217ENST00000489072 ZNF415Q09FC8 603 aa17.35■□□□□ 0.37
HMGN1-217ENST00000489072 ST6GAL2Q96JF0 529 aa17.35■□□□□ 0.37
HMGN1-217ENST00000489072 MDFICQ9P1T7 246 aa17.35■□□□□ 0.37
HMGN1-217ENST00000489072 ACTR3CQ9C0K3 210 aaPredicted RBP17.33■□□□□ 0.36
HMGN1-217ENST00000489072 BORCS7-ASMTA0A0B4J1R7 106 aa17.32■□□□□ 0.36
HMGN1-217ENST00000489072 NBDYA0A0U1RRE5 68 aa17.32■□□□□ 0.36
HMGN1-217ENST00000489072 F6UZH7 168 aa17.32■□□□□ 0.36
HMGN1-217ENST00000489072 IGHV3-53P01767 116 aa17.32■□□□□ 0.36
HMGN1-217ENST00000489072 TMEM183BQ1AE95 376 aa17.32■□□□□ 0.36
HMGN1-217ENST00000489072 TMEM183AQ8IXX5 376 aa17.32■□□□□ 0.36
HMGN1-217ENST00000489072 SGK494Q96LW2 274 aa17.32■□□□□ 0.36
HMGN1-217ENST00000489072 HERC2O95714 4834 aa17.31■□□□□ 0.36
HMGN1-217ENST00000489072 ESRGQ1W209 222 aa17.31■□□□□ 0.36
HMGN1-217ENST00000489072 C1orf134Q5TEV5 83 aa17.31■□□□□ 0.36
HMGN1-217ENST00000489072 FAM159AQ6UWV7 190 aa17.31■□□□□ 0.36
HMGN1-217ENST00000489072 C5orf17Q8NAS9 161 aa17.31■□□□□ 0.36
HMGN1-217ENST00000489072 A0A096LPF7 62 aa17.3■□□□□ 0.36
HMGN1-217ENST00000489072 GGTLC3B5MD39 225 aa17.3■□□□□ 0.36
HMGN1-217ENST00000489072 CXorf1O96002 111 aa17.3■□□□□ 0.36
HMGN1-217ENST00000489072 ZNF726P1Q15940 193 aa17.3■□□□□ 0.36
HMGN1-217ENST00000489072 TDRG1Q3Y452 100 aa17.3■□□□□ 0.36
HMGN1-217ENST00000489072 TREM1Q9NP99 234 aa17.3■□□□□ 0.36
HMGN1-217ENST00000489072 NAGKQ9UJ70 344 aa17.3■□□□□ 0.36
HMGN1-217ENST00000489072 TRGV11A0A075B6L2 103 aa17.29■□□□□ 0.36
HMGN1-217ENST00000489072 TCRAP04437 139 aa17.29■□□□□ 0.36
HMGN1-217ENST00000489072 TMEM167BQ9NRX6 74 aa17.29■□□□□ 0.36
HMGN1-217ENST00000489072 SMLR1H3BR10 107 aa17.28■□□□□ 0.36
HMGN1-217ENST00000489072 ARPC5O15511 151 aa17.28■□□□□ 0.36
HMGN1-217ENST00000489072 SUMO1P63165 101 aaKnown RBP17.28■□□□□ 0.36
HMGN1-217ENST00000489072 SOHLH1Q5JUK2 328 aa17.28■□□□□ 0.36
HMGN1-217ENST00000489072 KIAA1109Q2LD37 5005 aa17.27■□□□□ 0.36
HMGN1-217ENST00000489072 TRAV21A0A0B4J279 112 aa17.27■□□□□ 0.36
HMGN1-217ENST00000489072 SERTM2A0A1B0GWG4 89 aa17.27■□□□□ 0.36
HMGN1-217ENST00000489072 GNRH2O43555 120 aa17.27■□□□□ 0.36
HMGN1-217ENST00000489072 Q9H8V8 135 aa17.27■□□□□ 0.36
HMGN1-217ENST00000489072 CYTL1Q9NRR1 136 aa17.27■□□□□ 0.36
HMGN1-217ENST00000489072 IGLV2-11P01706 119 aa17.26■□□□□ 0.35
HMGN1-217ENST00000489072 FHL2Q14192 279 aa17.26■□□□□ 0.35
HMGN1-217ENST00000489072 IQCF2Q8IXL9 164 aa17.26■□□□□ 0.35
HMGN1-217ENST00000489072 C8orf49Q96NF6 230 aa17.26■□□□□ 0.35
HMGN1-217ENST00000489072 SPXQ9BT56 116 aa17.26■□□□□ 0.35
HMGN1-217ENST00000489072 EPDR1Q9UM22 224 aa17.26■□□□□ 0.35
HMGN1-217ENST00000489072 DNAH11Q96DT5 4516 aa17.26■□□□□ 0.35
HMGN1-217ENST00000489072 DYNC1H1Q14204 4646 aaKnown RBP17.25■□□□□ 0.35
HMGN1-217ENST00000489072 IGHV3-16A0A0C4DH30 117 aa17.25■□□□□ 0.35
HMGN1-217ENST00000489072 CTXND1A0A1B0GTU2 59 aa17.25■□□□□ 0.35
HMGN1-217ENST00000489072 PAX4O43316 350 aa17.25■□□□□ 0.35
HMGN1-217ENST00000489072 RASL10AQ92737 203 aa17.25■□□□□ 0.35
HMGN1-217ENST00000489072 UPK3BQ9BT76 320 aa17.25■□□□□ 0.35
HMGN1-217ENST00000489072 PSG8Q9UQ74 426 aa17.25■□□□□ 0.35
HMGN1-217ENST00000489072 MRPS16Q9Y3D3 137 aaKnown RBP17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms