RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 ATP5J2P56134 94 aa12.68□□□□□ -0.38
MCF2L-229ENST00000488765 PLEKHB2Q96CS7 222 aa12.68□□□□□ -0.38
MCF2L-229ENST00000488765 IGHV3-35A0A0C4DH35 117 aa12.68□□□□□ -0.38
MCF2L-229ENST00000488765 FABP5P3A8MUU1 101 aa12.68□□□□□ -0.38
MCF2L-229ENST00000488765 SNCGO76070 127 aa12.68□□□□□ -0.38
MCF2L-229ENST00000488765 SUB1P53999 127 aaKnown RBP eCLIP12.68□□□□□ -0.38
MCF2L-229ENST00000488765 C8orf46Q8TAG6 207 aa12.68□□□□□ -0.38
MCF2L-229ENST00000488765 IGFBPL1Q8WX77 278 aa12.68□□□□□ -0.38
MCF2L-229ENST00000488765 TRPT1Q86TN4 253 aaKnown RBP12.67□□□□□ -0.38
MCF2L-229ENST00000488765 TEN1Q86WV5 123 aa12.67□□□□□ -0.38
MCF2L-229ENST00000488765 CECR9P0C854 216 aa12.67□□□□□ -0.38
MCF2L-229ENST00000488765 ZNF80P51504 273 aaPredicted RBP12.67□□□□□ -0.38
MCF2L-229ENST00000488765 BEX4Q9NWD9 120 aaPredicted RBP12.67□□□□□ -0.38
MCF2L-229ENST00000488765 TRBV7-3A0A075B6L6 115 aa12.66□□□□□ -0.38
MCF2L-229ENST00000488765 MEIG1Q5JSS6 88 aa12.66□□□□□ -0.38
MCF2L-229ENST00000488765 MYOZ3Q8TDC0 251 aa12.66□□□□□ -0.38
MCF2L-229ENST00000488765 AAMDCQ9H7C9 122 aa12.66□□□□□ -0.38
MCF2L-229ENST00000488765 HLA-DMBP28068 263 aa12.66□□□□□ -0.38
MCF2L-229ENST00000488765 C9orf106Q8NAJ2 232 aa12.66□□□□□ -0.38
MCF2L-229ENST00000488765 A8MWV9 139 aa12.66□□□□□ -0.38
MCF2L-229ENST00000488765 SRRM5B3KS81 715 aa12.66□□□□□ -0.38
MCF2L-229ENST00000488765 SPG11Q96JI7 2443 aa12.65□□□□□ -0.38
MCF2L-229ENST00000488765 ARHGAP32A7KAX9 2087 aa12.65□□□□□ -0.38
MCF2L-229ENST00000488765 C9JAW5 83 aa12.65□□□□□ -0.38
MCF2L-229ENST00000488765 K7EM74 188 aa12.65□□□□□ -0.38
MCF2L-229ENST00000488765 M0QXV9 152 aa12.64□□□□□ -0.39
MCF2L-229ENST00000488765 ZNF493Q6ZR52 646 aa12.64□□□□□ -0.39
MCF2L-229ENST00000488765 ZMAT4Q9H898 229 aa12.64□□□□□ -0.39
MCF2L-229ENST00000488765 ZNF71Q9NQZ8 489 aaPredicted RBP12.64□□□□□ -0.39
MCF2L-229ENST00000488765 ONECUT1Q9UBC0 465 aa12.64□□□□□ -0.39
MCF2L-229ENST00000488765 ZNF815PA8K554 130 aa12.64□□□□□ -0.39
MCF2L-229ENST00000488765 TMEM155Q4W5P6 130 aa12.64□□□□□ -0.39
MCF2L-229ENST00000488765 U3KQK5 164 aa12.64□□□□□ -0.39
MCF2L-229ENST00000488765 POU2AF1Q16633 256 aa12.64□□□□□ -0.39
MCF2L-229ENST00000488765 TMEM78Q5T7P6 136 aa12.64□□□□□ -0.39
MCF2L-229ENST00000488765 MYMXA0A1B0GTQ4 84 aa12.63□□□□□ -0.39
MCF2L-229ENST00000488765 TRGV3P03979 118 aa12.63□□□□□ -0.39
MCF2L-229ENST00000488765 IFITM1P13164 125 aa12.63□□□□□ -0.39
MCF2L-229ENST00000488765 MRPL23Q16540 153 aaKnown RBP12.63□□□□□ -0.39
MCF2L-229ENST00000488765 THAP8Q8NA92 274 aa12.63□□□□□ -0.39
MCF2L-229ENST00000488765 RAXQ9Y2V3 346 aa12.63□□□□□ -0.39
MCF2L-229ENST00000488765 LGALS1P09382 135 aaKnown RBP12.63□□□□□ -0.39
MCF2L-229ENST00000488765 SLC25A16P16260 332 aa12.63□□□□□ -0.39
MCF2L-229ENST00000488765 RNF185Q96GF1 192 aa12.63□□□□□ -0.39
MCF2L-229ENST00000488765 CHCHD5Q9BSY4 110 aa12.63□□□□□ -0.39
MCF2L-229ENST00000488765 CGB3P0DN86 165 aa12.62□□□□□ -0.39
MCF2L-229ENST00000488765 CGB7P0DN87 165 aa12.62□□□□□ -0.39
MCF2L-229ENST00000488765 NGBQ9NPG2 151 aa12.62□□□□□ -0.39
MCF2L-229ENST00000488765 TRBV19A0A075B6N1 114 aa12.62□□□□□ -0.39
MCF2L-229ENST00000488765 RASL11BQ9BPW5 248 aa12.62□□□□□ -0.39
MCF2L-229ENST00000488765 IGHV3-23P01764 117 aa12.61□□□□□ -0.39
MCF2L-229ENST00000488765 SIGLEC15Q6ZMC9 328 aa12.61□□□□□ -0.39
MCF2L-229ENST00000488765 PPP1R27Q86WC6 154 aa12.61□□□□□ -0.39
MCF2L-229ENST00000488765 DTX2Q86UW9 622 aa12.61□□□□□ -0.39
MCF2L-229ENST00000488765 TNFRSF18Q9Y5U5 241 aa12.61□□□□□ -0.39
MCF2L-229ENST00000488765 RHODO00212 210 aa12.6□□□□□ -0.39
MCF2L-229ENST00000488765 NTN5Q8WTR8 489 aaPredicted RBP12.6□□□□□ -0.39
MCF2L-229ENST00000488765 TEX49A0A1B0GTD5 131 aa12.6□□□□□ -0.39
MCF2L-229ENST00000488765 M0R1B8 84 aa12.6□□□□□ -0.39
MCF2L-229ENST00000488765 IGHV4-39P01824 125 aa12.6□□□□□ -0.39
MCF2L-229ENST00000488765 PRADC1Q9BSG0 188 aa12.6□□□□□ -0.39
MCF2L-229ENST00000488765 LOC107984640A0A0U1RRK4 108 aa12.6□□□□□ -0.39
MCF2L-229ENST00000488765 SRSF1Q07955 248 aaKnown RBP eCLIP12.6□□□□□ -0.39
MCF2L-229ENST00000488765 ERCC8Q13216 396 aa12.6□□□□□ -0.39
MCF2L-229ENST00000488765 OR4C13Q8NGP0 309 aa12.6□□□□□ -0.39
MCF2L-229ENST00000488765 YAE1D1Q9NRH1 226 aa12.6□□□□□ -0.39
MCF2L-229ENST00000488765 A0A087WX48 190 aa12.59□□□□□ -0.39
MCF2L-229ENST00000488765 TRAV17A0A0B4J275 112 aa12.59□□□□□ -0.39
MCF2L-229ENST00000488765 CCL8P80075 99 aa12.59□□□□□ -0.39
MCF2L-229ENST00000488765 ATP5LO75964 103 aa12.58□□□□□ -0.39
MCF2L-229ENST00000488765 TRGV9Q99603 122 aa12.58□□□□□ -0.39
MCF2L-229ENST00000488765 RAB9BQ9NP90 201 aa12.58□□□□□ -0.39
MCF2L-229ENST00000488765 MALRD1Q5VYJ5 2156 aa12.58□□□□□ -0.4
MCF2L-229ENST00000488765 RPL7P18124 248 aaKnown RBP12.58□□□□□ -0.4
MCF2L-229ENST00000488765 IGHV3OR16-13A0A075B7E8 117 aa12.58□□□□□ -0.4
MCF2L-229ENST00000488765 IGHV3-74A0A0B4J1X5 117 aa12.58□□□□□ -0.4
MCF2L-229ENST00000488765 TM4SF5O14894 197 aa12.58□□□□□ -0.4
MCF2L-229ENST00000488765 C15orf53Q8NAA6 179 aa12.58□□□□□ -0.4
MCF2L-229ENST00000488765 SLC25A20O43772 301 aa12.57□□□□□ -0.4
MCF2L-229ENST00000488765 Q6ZS46 218 aa12.57□□□□□ -0.4
MCF2L-229ENST00000488765 OR11H6Q8NGC7 330 aa12.57□□□□□ -0.4
MCF2L-229ENST00000488765 ATP6V0E2Q8NHE4 81 aa12.57□□□□□ -0.4
MCF2L-229ENST00000488765 VPREB3Q9UKI3 123 aa12.56□□□□□ -0.4
MCF2L-229ENST00000488765 CD40P25942 277 aa12.56□□□□□ -0.4
MCF2L-229ENST00000488765 TMEM167AQ8TBQ9 72 aa12.56□□□□□ -0.4
MCF2L-229ENST00000488765 NXT2Q9NPJ8 142 aaKnown RBP12.56□□□□□ -0.4
MCF2L-229ENST00000488765 ANKHD1Q8IWZ3 2542 aaKnown RBP12.56□□□□□ -0.4
MCF2L-229ENST00000488765 RPL27AP46776 148 aaKnown RBP12.56□□□□□ -0.4
MCF2L-229ENST00000488765 FAM27E3Q08E93 113 aa12.56□□□□□ -0.4
MCF2L-229ENST00000488765 IGKV1-17P01599 117 aa12.55□□□□□ -0.4
MCF2L-229ENST00000488765 Q6ZT83 130 aa12.55□□□□□ -0.4
MCF2L-229ENST00000488765 SCNM1Q9BWG6 230 aa12.55□□□□□ -0.4
MCF2L-229ENST00000488765 ELANEP08246 267 aa12.55□□□□□ -0.4
MCF2L-229ENST00000488765 ATP5IP56385 69 aaPredicted RBP12.55□□□□□ -0.4
MCF2L-229ENST00000488765 LAGE3Q14657 143 aa12.55□□□□□ -0.4
MCF2L-229ENST00000488765 PLGLAQ15195 96 aa12.55□□□□□ -0.4
MCF2L-229ENST00000488765 TAL2Q16559 108 aa12.55□□□□□ -0.4
MCF2L-229ENST00000488765 SCGB3A1Q96QR1 104 aa12.55□□□□□ -0.4
MCF2L-229ENST00000488765 IGHV1-18A0A0C4DH31 117 aa12.54□□□□□ -0.4
MCF2L-229ENST00000488765 IGHV3-66A0A0C4DH42 116 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms