RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 GNB1LQ9BYB4 327 aa7.07□□□□□ -1.28
SF3B1-211ENST00000487698 A0A1B0GUS0 222 aa7.06□□□□□ -1.28
SF3B1-211ENST00000487698 FABP5P3A8MUU1 101 aa7.06□□□□□ -1.28
SF3B1-211ENST00000487698 SPINK4O60575 86 aa7.06□□□□□ -1.28
SF3B1-211ENST00000487698 ZNF688P0C7X2 276 aa7.06□□□□□ -1.28
SF3B1-211ENST00000487698 TRGC1P0CF51 173 aa7.06□□□□□ -1.28
SF3B1-211ENST00000487698 GZMBP10144 247 aa7.06□□□□□ -1.28
SF3B1-211ENST00000487698 SNRPD3P62318 126 aaKnown RBP7.06□□□□□ -1.28
SF3B1-211ENST00000487698 HIST1H1AQ02539 215 aaPredicted RBP7.06□□□□□ -1.28
SF3B1-211ENST00000487698 DEFB114Q30KQ6 69 aa7.06□□□□□ -1.28
SF3B1-211ENST00000487698 COX19Q49B96 90 aa7.06□□□□□ -1.28
SF3B1-211ENST00000487698 PRR9Q5T870 116 aa7.06□□□□□ -1.28
SF3B1-211ENST00000487698 MRPL54Q6P161 138 aaKnown RBP7.06□□□□□ -1.28
SF3B1-211ENST00000487698 TMEM136Q6ZRR5 245 aa7.06□□□□□ -1.28
SF3B1-211ENST00000487698 ATP5L2Q7Z4Y8 100 aa7.06□□□□□ -1.28
SF3B1-211ENST00000487698 ZNF575Q86XF7 245 aa7.06□□□□□ -1.28
SF3B1-211ENST00000487698 TMEM61Q8N0U2 210 aa7.06□□□□□ -1.28
SF3B1-211ENST00000487698 ZFAND2AQ8N6M9 145 aa7.06□□□□□ -1.28
SF3B1-211ENST00000487698 SIGLEC8Q9NYZ4 499 aa7.06□□□□□ -1.28
SF3B1-211ENST00000487698 AGRNO00468 2067 aa7.06□□□□□ -1.28
SF3B1-211ENST00000487698 JMJD1CQ15652 2540 aa7.06□□□□□ -1.28
SF3B1-211ENST00000487698 TMEM189A5PLL7 270 aa7.06□□□□□ -1.28
SF3B1-211ENST00000487698 CYSRT1A8MQ03 144 aa7.06□□□□□ -1.28
SF3B1-211ENST00000487698 MT-ND6P03923 174 aa7.06□□□□□ -1.28
SF3B1-211ENST00000487698 CRISP2P16562 243 aa7.06□□□□□ -1.28
SF3B1-211ENST00000487698 PAFAH1B2P68402 229 aa7.06□□□□□ -1.28
SF3B1-211ENST00000487698 FABP9Q0Z7S8 132 aa7.06□□□□□ -1.28
SF3B1-211ENST00000487698 LINC01559Q495D7 138 aa7.06□□□□□ -1.28
SF3B1-211ENST00000487698 PSMG4Q5JS54 123 aa7.06□□□□□ -1.28
SF3B1-211ENST00000487698 WDR73Q6P4I2 378 aa7.06□□□□□ -1.28
SF3B1-211ENST00000487698 NDUFA11Q86Y39 141 aa7.06□□□□□ -1.28
SF3B1-211ENST00000487698 APRG1Q8IVJ8 170 aa7.06□□□□□ -1.28
SF3B1-211ENST00000487698 SAV1Q9H4B6 383 aaPredicted RBP7.06□□□□□ -1.28
SF3B1-211ENST00000487698 TRAPPC1Q9Y5R8 145 aa7.06□□□□□ -1.28
SF3B1-211ENST00000487698 NIPBLQ6KC79 2804 aaeCLIP7.05□□□□□ -1.28
SF3B1-211ENST00000487698 C5orf52A6NGY3 159 aa7.05□□□□□ -1.28
SF3B1-211ENST00000487698 SNURFLB1AK76 121 aa7.05□□□□□ -1.28
SF3B1-211ENST00000487698 GDF5OSQ5U4N7 250 aa7.05□□□□□ -1.28
SF3B1-211ENST00000487698 Q6AWC8 147 aa7.05□□□□□ -1.28
SF3B1-211ENST00000487698 DYNLRB2Q8TF09 96 aa7.05□□□□□ -1.28
SF3B1-211ENST00000487698 TENM1Q9UKZ4 2725 aa7.05□□□□□ -1.28
SF3B1-211ENST00000487698 A0A0J9YX75 114 aa7.04□□□□□ -1.28
SF3B1-211ENST00000487698 PGLYRP4Q96LB8 373 aa7.04□□□□□ -1.28
SF3B1-211ENST00000487698 ODF3Q96PU9 254 aa7.04□□□□□ -1.28
SF3B1-211ENST00000487698 MRPL18Q9H0U6 180 aaKnown RBP7.04□□□□□ -1.28
SF3B1-211ENST00000487698 C11orf21Q9P2W6 132 aa7.04□□□□□ -1.28
SF3B1-211ENST00000487698 TEP1Q99973 2627 aaKnown RBP7.04□□□□□ -1.28
SF3B1-211ENST00000487698 XKRY2A2RUG3 117 aa7.04□□□□□ -1.28
SF3B1-211ENST00000487698 HLA-DQA1P01909 254 aa7.04□□□□□ -1.28
SF3B1-211ENST00000487698 S100A6P06703 90 aa7.04□□□□□ -1.28
SF3B1-211ENST00000487698 IGLC6P0CF74 106 aa7.04□□□□□ -1.28
SF3B1-211ENST00000487698 RPS20P60866 119 aaKnown RBP7.04□□□□□ -1.28
SF3B1-211ENST00000487698 SNRPEP62304 92 aaKnown RBP7.04□□□□□ -1.28
SF3B1-211ENST00000487698 CD300EQ496F6 205 aaPredicted RBP7.04□□□□□ -1.28
SF3B1-211ENST00000487698 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.04□□□□□ -1.28
SF3B1-211ENST00000487698 TMSB15BA0A087X1C1 80 aa7.03□□□□□ -1.28
SF3B1-211ENST00000487698 TRAV25A0A0B4J276 109 aa7.03□□□□□ -1.28
SF3B1-211ENST00000487698 IGKV3D-20A0A0C4DH25 116 aa7.03□□□□□ -1.28
SF3B1-211ENST00000487698 KLLNB2CW77 178 aa7.03□□□□□ -1.28
SF3B1-211ENST00000487698 CTRLP40313 264 aa7.03□□□□□ -1.28
SF3B1-211ENST00000487698 HBBP68871 147 aa7.03□□□□□ -1.28
SF3B1-211ENST00000487698 NSUN5P1Q3KNT7 163 aa7.03□□□□□ -1.28
SF3B1-211ENST00000487698 FOXI2Q6ZQN5 318 aa7.03□□□□□ -1.28
SF3B1-211ENST00000487698 SPAG8Q99932 426 aaPredicted RBP7.03□□□□□ -1.28
SF3B1-211ENST00000487698 ATRQ13535 2644 aa7.03□□□□□ -1.28
SF3B1-211ENST00000487698 UBE2CO00762 179 aa7.03□□□□□ -1.28
SF3B1-211ENST00000487698 ORM1P02763 201 aa7.03□□□□□ -1.28
SF3B1-211ENST00000487698 Q6ZQT7 251 aa7.03□□□□□ -1.28
SF3B1-211ENST00000487698 ZNF256Q9Y2P7 627 aaPredicted RBP7.03□□□□□ -1.28
SF3B1-211ENST00000487698 A0A1B0GUT8 65 aa7.02□□□□□ -1.29
SF3B1-211ENST00000487698 A8MTW9 85 aa7.02□□□□□ -1.29
SF3B1-211ENST00000487698 ARMS2P0C7Q2 107 aa7.02□□□□□ -1.29
SF3B1-211ENST00000487698 CD33P20138 364 aa7.02□□□□□ -1.29
SF3B1-211ENST00000487698 NDUFA6P56556 154 aa7.02□□□□□ -1.29
SF3B1-211ENST00000487698 KIR3DS1Q14943 382 aa7.02□□□□□ -1.29
SF3B1-211ENST00000487698 COA6Q5JTJ3 125 aaKnown RBP7.02□□□□□ -1.29
SF3B1-211ENST00000487698 EBLN2Q6P2I7 272 aa7.02□□□□□ -1.29
SF3B1-211ENST00000487698 GATD1Q8NB37 220 aa7.02□□□□□ -1.29
SF3B1-211ENST00000487698 TRAV21A0A0B4J279 112 aa7.01□□□□□ -1.29
SF3B1-211ENST00000487698 OR4C46A6NHA9 309 aa7.01□□□□□ -1.29
SF3B1-211ENST00000487698 GPX1P07203 203 aa7.01□□□□□ -1.29
SF3B1-211ENST00000487698 CAMPP49913 170 aa7.01□□□□□ -1.29
SF3B1-211ENST00000487698 RAB4BP61018 213 aa7.01□□□□□ -1.29
SF3B1-211ENST00000487698 SLAQ13239 276 aa7.01□□□□□ -1.29
SF3B1-211ENST00000487698 LYZL1Q6UWQ5 148 aa7.01□□□□□ -1.29
SF3B1-211ENST00000487698 AMTNQ6UX39 209 aa7.01□□□□□ -1.29
SF3B1-211ENST00000487698 FER1L6-AS1Q8NA97 138 aa7.01□□□□□ -1.29
SF3B1-211ENST00000487698 CNFNQ9BYD5 112 aa7.01□□□□□ -1.29
SF3B1-211ENST00000487698 MAP6D1Q9H9H5 199 aa7.01□□□□□ -1.29
SF3B1-211ENST00000487698 A0A1B0GW15 77 aa7.01□□□□□ -1.29
SF3B1-211ENST00000487698 J3KRW8 73 aa7.01□□□□□ -1.29
SF3B1-211ENST00000487698 DUSP14O95147 198 aaKnown RBP7.01□□□□□ -1.29
SF3B1-211ENST00000487698 HOXA5P20719 270 aa7.01□□□□□ -1.29
SF3B1-211ENST00000487698 DEFB131AP59861 70 aa7.01□□□□□ -1.29
SF3B1-211ENST00000487698 GRIFINA4D1Z8 144 aa7□□□□□ -1.29
SF3B1-211ENST00000487698 IGLV1-51P01701 117 aa7□□□□□ -1.29
SF3B1-211ENST00000487698 APCSP02743 223 aa7□□□□□ -1.29
SF3B1-211ENST00000487698 HLA-DRB4P13762 266 aa7□□□□□ -1.29
SF3B1-211ENST00000487698 RNASE4P34096 147 aaKnown RBP7□□□□□ -1.29
SF3B1-211ENST00000487698 LEPP41159 167 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms