RNA–Protein interactions for RNA: ENST00000487222.5

EPHB4-206, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 5,058 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-206ENST00000487222 HLA-DRB4X5D2U9 266 aa11.68□□□□□ -0.54
EPHB4-206ENST00000487222 BVES-AS1Q5T3Y7 98 aa11.67□□□□□ -0.54
EPHB4-206ENST00000487222 ZNF625Q96I27 306 aaPredicted RBP11.67□□□□□ -0.54
EPHB4-206ENST00000487222 PYGO2Q9BRQ0 406 aa11.67□□□□□ -0.54
EPHB4-206ENST00000487222 FAM208BQ5VWN6 2430 aa11.67□□□□□ -0.54
EPHB4-206ENST00000487222 ZNF491Q8N8L2 437 aa11.67□□□□□ -0.54
EPHB4-206ENST00000487222 C8orf31Q8N9H6 132 aa11.67□□□□□ -0.54
EPHB4-206ENST00000487222 TRAV26-2A0A0B4J265 109 aa11.67□□□□□ -0.54
EPHB4-206ENST00000487222 WIPF2Q8TF74 440 aaPredicted RBP11.67□□□□□ -0.54
EPHB4-206ENST00000487222 MUC6Q6W4X9 2439 aa11.67□□□□□ -0.54
EPHB4-206ENST00000487222 F8W1H4 67 aa11.67□□□□□ -0.54
EPHB4-206ENST00000487222 K7EP34 96 aa11.67□□□□□ -0.54
EPHB4-206ENST00000487222 DEFB130BP0DP73 79 aa11.67□□□□□ -0.54
EPHB4-206ENST00000487222 DEFB130AP0DP74 79 aa11.67□□□□□ -0.54
EPHB4-206ENST00000487222 TAL2Q16559 108 aa11.67□□□□□ -0.54
EPHB4-206ENST00000487222 COA6Q5JTJ3 125 aaKnown RBP11.67□□□□□ -0.54
EPHB4-206ENST00000487222 GAGE2AQ6NT46 116 aa11.67□□□□□ -0.54
EPHB4-206ENST00000487222 KLK9Q9UKQ9 250 aa11.67□□□□□ -0.54
EPHB4-206ENST00000487222 KLF12Q9Y4X4 402 aa11.67□□□□□ -0.54
EPHB4-206ENST00000487222 ETDBQ3ZM63 59 aa11.66□□□□□ -0.54
EPHB4-206ENST00000487222 XCL2Q9UBD3 114 aa11.66□□□□□ -0.54
EPHB4-206ENST00000487222 ZGRF1Q86YA3 2104 aa11.66□□□□□ -0.54
EPHB4-206ENST00000487222 K7EP13 123 aa11.66□□□□□ -0.54
EPHB4-206ENST00000487222 CDKN1BP46527 198 aa11.66□□□□□ -0.54
EPHB4-206ENST00000487222 SSC4DQ8WTU2 575 aa11.66□□□□□ -0.54
EPHB4-206ENST00000487222 PPDPFLQ8WWR9 84 aa11.66□□□□□ -0.54
EPHB4-206ENST00000487222 H3BMM0 161 aa11.65□□□□□ -0.54
EPHB4-206ENST00000487222 INAFM2P0DMQ5 153 aa11.65□□□□□ -0.54
EPHB4-206ENST00000487222 UBE2WQ96B02 151 aa11.65□□□□□ -0.54
EPHB4-206ENST00000487222 C20orf78Q9BR46 151 aa11.65□□□□□ -0.54
EPHB4-206ENST00000487222 C11orf53Q8IXP5 236 aa11.65□□□□□ -0.54
EPHB4-206ENST00000487222 SIVA1O15304 175 aa11.65□□□□□ -0.54
EPHB4-206ENST00000487222 RNF138Q8WVD3 245 aa11.65□□□□□ -0.54
EPHB4-206ENST00000487222 IGLC7A0M8Q6 106 aa11.65□□□□□ -0.54
EPHB4-206ENST00000487222 GAGE12JA6NER3 117 aa11.65□□□□□ -0.54
EPHB4-206ENST00000487222 LINC01619G3V211 115 aa11.65□□□□□ -0.54
EPHB4-206ENST00000487222 GAGE4Q13068 117 aa11.65□□□□□ -0.54
EPHB4-206ENST00000487222 GAGE5Q13069 117 aa11.65□□□□□ -0.54
EPHB4-206ENST00000487222 SPANXA1Q9NS26 97 aa11.65□□□□□ -0.54
EPHB4-206ENST00000487222 KLF5Q13887 457 aaPredicted RBP11.64□□□□□ -0.55
EPHB4-206ENST00000487222 Q6ZSR3 168 aa11.64□□□□□ -0.55
EPHB4-206ENST00000487222 RNF114Q9Y508 228 aa11.64□□□□□ -0.55
EPHB4-206ENST00000487222 NBL1P41271 181 aa11.64□□□□□ -0.55
EPHB4-206ENST00000487222 LYPD6Q86Y78 171 aa11.64□□□□□ -0.55
EPHB4-206ENST00000487222 ZNF48Q96MX3 618 aaPredicted RBP11.64□□□□□ -0.55
EPHB4-206ENST00000487222 A0A1W2PPM0 123 aa11.64□□□□□ -0.55
EPHB4-206ENST00000487222 VWC2LB2RUY7 222 aa11.64□□□□□ -0.55
EPHB4-206ENST00000487222 NDUFS7O75251 213 aa11.64□□□□□ -0.55
EPHB4-206ENST00000487222 TCF15Q12870 199 aa11.64□□□□□ -0.55
EPHB4-206ENST00000487222 TRBV25-1A0A075B6N4 114 aa11.63□□□□□ -0.55
EPHB4-206ENST00000487222 ZNF747Q9BV97 191 aa11.63□□□□□ -0.55
EPHB4-206ENST00000487222 NDUFA12Q9UI09 145 aa11.63□□□□□ -0.55
EPHB4-206ENST00000487222 INS-IGF2F8WCM5 200 aa11.63□□□□□ -0.55
EPHB4-206ENST00000487222 ASPHD1Q5U4P2 390 aa11.63□□□□□ -0.55
EPHB4-206ENST00000487222 SP5Q6BEB4 398 aaPredicted RBP11.63□□□□□ -0.55
EPHB4-206ENST00000487222 PRO1854Q9UHT4 67 aa11.63□□□□□ -0.55
EPHB4-206ENST00000487222 KIAA1671Q9BY89 1806 aa11.63□□□□□ -0.55
EPHB4-206ENST00000487222 RNF223E7ERA6 249 aa11.63□□□□□ -0.55
EPHB4-206ENST00000487222 SRSF2Q01130 221 aaKnown RBP11.63□□□□□ -0.55
EPHB4-206ENST00000487222 CEND1Q8N111 149 aa11.63□□□□□ -0.55
EPHB4-206ENST00000487222 TSSC4Q9Y5U2 329 aaPredicted RBP11.63□□□□□ -0.55
EPHB4-206ENST00000487222 EDA2RQ9HAV5 297 aa11.62□□□□□ -0.55
EPHB4-206ENST00000487222 FRMPD3Q5JV73 1810 aa11.62□□□□□ -0.55
EPHB4-206ENST00000487222 IGHV3-16A0A0C4DH30 117 aa11.62□□□□□ -0.55
EPHB4-206ENST00000487222 TCTEX1D4Q5JR98 221 aa11.62□□□□□ -0.55
EPHB4-206ENST00000487222 FGF23Q9GZV9 251 aaPredicted RBP11.62□□□□□ -0.55
EPHB4-206ENST00000487222 PLXND1Q9Y4D7 1925 aa11.62□□□□□ -0.55
EPHB4-206ENST00000487222 FGF6P10767 208 aa11.62□□□□□ -0.55
EPHB4-206ENST00000487222 ACACBO00763 2458 aa11.62□□□□□ -0.55
EPHB4-206ENST00000487222 TRAV12-2A0A075B6T6 113 aa11.61□□□□□ -0.55
EPHB4-206ENST00000487222 AZU1P20160 251 aa11.61□□□□□ -0.55
EPHB4-206ENST00000487222 FAM120AOSQ5T036 256 aa11.61□□□□□ -0.55
EPHB4-206ENST00000487222 PTPRQQ9UMZ3 2332 aa11.61□□□□□ -0.55
EPHB4-206ENST00000487222 IGHV7-4-1A0A0J9YVY3 117 aa11.61□□□□□ -0.55
EPHB4-206ENST00000487222 KIR2DL5BA0A0G2JN68 375 aa11.61□□□□□ -0.55
EPHB4-206ENST00000487222 KIR2DL5BA0A0G2JPC4 375 aa11.61□□□□□ -0.55
EPHB4-206ENST00000487222 SOCS3O14543 225 aa11.61□□□□□ -0.55
EPHB4-206ENST00000487222 KIR2DL5AQ8N109 375 aa11.61□□□□□ -0.55
EPHB4-206ENST00000487222 ZNRF2Q8NHG8 242 aa11.61□□□□□ -0.55
EPHB4-206ENST00000487222 C17orf77Q96MU5 243 aa11.61□□□□□ -0.55
EPHB4-206ENST00000487222 DKK2Q9UBU2 259 aa11.61□□□□□ -0.55
EPHB4-206ENST00000487222 KRTAP27-1Q3LI81 207 aa11.6□□□□□ -0.55
EPHB4-206ENST00000487222 F8WEM9 126 aa11.6□□□□□ -0.55
EPHB4-206ENST00000487222 J3QQQ9 107 aa11.6□□□□□ -0.55
EPHB4-206ENST00000487222 TMEM243Q9BU79 118 aa11.6□□□□□ -0.55
EPHB4-206ENST00000487222 LENEPQ9Y5L5 61 aa11.6□□□□□ -0.55
EPHB4-206ENST00000487222 CDPF1Q6NVV7 123 aa11.59□□□□□ -0.55
EPHB4-206ENST00000487222 CTSZQ9UBR2 303 aa11.59□□□□□ -0.55
EPHB4-206ENST00000487222 C22orf46C9J442 243 aa11.59□□□□□ -0.55
EPHB4-206ENST00000487222 EGR2P11161 476 aaPredicted RBP11.59□□□□□ -0.55
EPHB4-206ENST00000487222 MAJINQ3KP22 176 aa11.59□□□□□ -0.55
EPHB4-206ENST00000487222 ZNF493Q6ZR52 646 aa11.59□□□□□ -0.55
EPHB4-206ENST00000487222 MRPL53Q96EL3 112 aaKnown RBP11.59□□□□□ -0.55
EPHB4-206ENST00000487222 AGPAT4-IT1Q9H0P7 198 aa11.59□□□□□ -0.55
EPHB4-206ENST00000487222 K7EMI3 77 aa11.59□□□□□ -0.55
EPHB4-206ENST00000487222 H3BUA1 57 aa11.59□□□□□ -0.55
EPHB4-206ENST00000487222 PFN2P35080 140 aa11.58□□□□□ -0.55
EPHB4-206ENST00000487222 DYNAPQ8N1N2 210 aa11.58□□□□□ -0.55
EPHB4-206ENST00000487222 PLA2G2EQ9NZK7 142 aa11.58□□□□□ -0.55
EPHB4-206ENST00000487222 NUP210Q8TEM1 1887 aaPredicted RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 128.4 ms