RNA–Protein interactions for RNA: ENST00000486806.1

MCF2L-227, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-227ENST00000486806 APOC4P55056 127 aa6.99□□□□□ -1.29
MCF2L-227ENST00000486806 FXYD7P58549 80 aa6.99□□□□□ -1.29
MCF2L-227ENST00000486806 BTN1A1Q13410 526 aa6.99□□□□□ -1.29
MCF2L-227ENST00000486806 RBMY1FQ15415 496 aaKnown RBP6.99□□□□□ -1.29
MCF2L-227ENST00000486806 ZNF674Q2M3X9 581 aa6.99□□□□□ -1.29
MCF2L-227ENST00000486806 FAM74A3Q4VXF1 159 aa6.99□□□□□ -1.29
MCF2L-227ENST00000486806 Q6AWC8 147 aa6.99□□□□□ -1.29
MCF2L-227ENST00000486806 BAGE2Q86Y30 109 aa6.99□□□□□ -1.29
MCF2L-227ENST00000486806 NHLRC2Q8NBF2 726 aa6.99□□□□□ -1.29
MCF2L-227ENST00000486806 CSNK1G2-AS1Q8NCQ2 148 aa6.99□□□□□ -1.29
MCF2L-227ENST00000486806 ZC2HC1AQ96GY0 325 aa6.99□□□□□ -1.29
MCF2L-227ENST00000486806 SMIM7Q9BQ49 75 aa6.99□□□□□ -1.29
MCF2L-227ENST00000486806 CSTL1Q9H114 145 aa6.99□□□□□ -1.29
MCF2L-227ENST00000486806 LY96Q9Y6Y9 160 aa6.99□□□□□ -1.29
MCF2L-227ENST00000486806 HUWE1Q7Z6Z7 4374 aaKnown RBP6.98□□□□□ -1.29
MCF2L-227ENST00000486806 C7orf71A4D174 169 aa6.98□□□□□ -1.29
MCF2L-227ENST00000486806 PGPEP1LA6NFU8 196 aa6.98□□□□□ -1.29
MCF2L-227ENST00000486806 ZNF727A8MUV8 499 aa6.98□□□□□ -1.29
MCF2L-227ENST00000486806 K7EN84 100 aa6.98□□□□□ -1.29
MCF2L-227ENST00000486806 INSP01308 110 aa6.98□□□□□ -1.29
MCF2L-227ENST00000486806 ZNF80P51504 273 aaPredicted RBP6.98□□□□□ -1.29
MCF2L-227ENST00000486806 NDUFA5Q16718 116 aa6.98□□□□□ -1.29
MCF2L-227ENST00000486806 SMUG1Q53HV7 270 aa6.98□□□□□ -1.29
MCF2L-227ENST00000486806 SOHLH1Q5JUK2 328 aa6.98□□□□□ -1.29
MCF2L-227ENST00000486806 C1QTNF4Q9BXJ3 329 aa6.98□□□□□ -1.29
MCF2L-227ENST00000486806 XCL2Q9UBD3 114 aa6.98□□□□□ -1.29
MCF2L-227ENST00000486806 MEGF8Q7Z7M0 2845 aa6.98□□□□□ -1.29
MCF2L-227ENST00000486806 J3KRW8 73 aa6.97□□□□□ -1.29
MCF2L-227ENST00000486806 UBE2CO00762 179 aa6.97□□□□□ -1.29
MCF2L-227ENST00000486806 ZNF324O75467 553 aaPredicted RBP6.97□□□□□ -1.29
MCF2L-227ENST00000486806 GCGP01275 180 aa6.97□□□□□ -1.29
MCF2L-227ENST00000486806 GPX1P07203 203 aa6.97□□□□□ -1.29
MCF2L-227ENST00000486806 PFN1P07737 140 aaKnown RBP6.97□□□□□ -1.29
MCF2L-227ENST00000486806 CRIP1P50238 77 aa6.97□□□□□ -1.29
MCF2L-227ENST00000486806 Q6ZQT7 251 aa6.97□□□□□ -1.29
MCF2L-227ENST00000486806 LINC01551Q86U37 167 aa6.97□□□□□ -1.29
MCF2L-227ENST00000486806 C1orf158Q8N1D5 194 aa6.97□□□□□ -1.29
MCF2L-227ENST00000486806 MRAPQ8TCY5 172 aa6.97□□□□□ -1.29
MCF2L-227ENST00000486806 C20orf144Q9BQM9 153 aa6.97□□□□□ -1.29
MCF2L-227ENST00000486806 NAT8Q9UHE5 227 aa6.97□□□□□ -1.29
MCF2L-227ENST00000486806 TRAV21A0A0B4J279 112 aa6.96□□□□□ -1.3
MCF2L-227ENST00000486806 RNASE4P34096 147 aaKnown RBP6.96□□□□□ -1.3
MCF2L-227ENST00000486806 DEFA6Q01524 100 aa6.96□□□□□ -1.3
MCF2L-227ENST00000486806 C10orf91Q5T1B1 145 aa6.96□□□□□ -1.3
MCF2L-227ENST00000486806 ZNF705AQ6ZN79 300 aaPredicted RBP6.96□□□□□ -1.3
MCF2L-227ENST00000486806 Q6ZWC4 215 aa6.96□□□□□ -1.3
MCF2L-227ENST00000486806 SLC7A5P1Q8MH63 180 aa6.96□□□□□ -1.3
MCF2L-227ENST00000486806 OCC1Q8TAD7 63 aa6.96□□□□□ -1.3
MCF2L-227ENST00000486806 NIPSNAP3BQ9BS92 247 aa6.96□□□□□ -1.3
MCF2L-227ENST00000486806 SEC11CQ9BY50 192 aa6.96□□□□□ -1.3
MCF2L-227ENST00000486806 TRAV12-3A0A0B4J271 114 aa6.95□□□□□ -1.3
MCF2L-227ENST00000486806 C19orf71A6NCJ1 209 aa6.95□□□□□ -1.3
MCF2L-227ENST00000486806 SH2D1AO60880 128 aa6.95□□□□□ -1.3
MCF2L-227ENST00000486806 MGST1P10620 155 aaKnown RBP6.95□□□□□ -1.3
MCF2L-227ENST00000486806 RPL23P62829 140 aaKnown RBP6.95□□□□□ -1.3
MCF2L-227ENST00000486806 TMEM241Q24JQ0 296 aa6.95□□□□□ -1.3
MCF2L-227ENST00000486806 DEFB135Q30KP9 77 aa6.95□□□□□ -1.3
MCF2L-227ENST00000486806 FAM162BQ5T6X4 162 aa6.95□□□□□ -1.3
MCF2L-227ENST00000486806 SBSPONQ8IVN8 264 aa6.95□□□□□ -1.3
MCF2L-227ENST00000486806 TMEM256Q8N2U0 113 aa6.95□□□□□ -1.3
MCF2L-227ENST00000486806 LINC00467Q9BRT7 94 aa6.95□□□□□ -1.3
MCF2L-227ENST00000486806 SDF2L1Q9HCN8 221 aa6.95□□□□□ -1.3
MCF2L-227ENST00000486806 C11orf21Q9P2W6 132 aa6.95□□□□□ -1.3
MCF2L-227ENST00000486806 TP53TG1Q9Y2A0 90 aa6.95□□□□□ -1.3
MCF2L-227ENST00000486806 CARHSP1Q9Y2V2 147 aaKnown RBP6.95□□□□□ -1.3
MCF2L-227ENST00000486806 AGRNO00468 2067 aa6.95□□□□□ -1.3
MCF2L-227ENST00000486806 F8W036 122 aa6.94□□□□□ -1.3
MCF2L-227ENST00000486806 H7BYZ3 331 aa6.94□□□□□ -1.3
MCF2L-227ENST00000486806 PNRC1Q12796 327 aaPredicted RBP6.94□□□□□ -1.3
MCF2L-227ENST00000486806 OR5I1Q13606 314 aa6.94□□□□□ -1.3
MCF2L-227ENST00000486806 TDRG1Q3Y452 100 aa6.94□□□□□ -1.3
MCF2L-227ENST00000486806 LINC01559Q495D7 138 aa6.94□□□□□ -1.3
MCF2L-227ENST00000486806 DEFB121Q5J5C9 76 aa6.94□□□□□ -1.3
MCF2L-227ENST00000486806 PRR27Q6MZM9 219 aa6.94□□□□□ -1.3
MCF2L-227ENST00000486806 ISOC2Q96AB3 205 aa6.94□□□□□ -1.3
MCF2L-227ENST00000486806 RNF183Q96D59 192 aa6.94□□□□□ -1.3
MCF2L-227ENST00000486806 RCHY1Q96PM5 261 aa6.94□□□□□ -1.3
MCF2L-227ENST00000486806 B9D2Q9BPU9 175 aa6.94□□□□□ -1.3
MCF2L-227ENST00000486806 TM2D3Q9BRN9 247 aa6.94□□□□□ -1.3
MCF2L-227ENST00000486806 BIN3Q9NQY0 253 aa6.94□□□□□ -1.3
MCF2L-227ENST00000486806 GOLT1BQ9Y3E0 138 aa6.94□□□□□ -1.3
MCF2L-227ENST00000486806 IGKV3D-20A0A0C4DH25 116 aa6.93□□□□□ -1.3
MCF2L-227ENST00000486806 FABP5P3A8MUU1 101 aa6.93□□□□□ -1.3
MCF2L-227ENST00000486806 KRBOX1C9JBD0 128 aa6.93□□□□□ -1.3
MCF2L-227ENST00000486806 ADIRFQ15847 76 aa6.93□□□□□ -1.3
MCF2L-227ENST00000486806 FAM231DQ6ZW35 169 aa6.93□□□□□ -1.3
MCF2L-227ENST00000486806 ZNF575Q86XF7 245 aa6.93□□□□□ -1.3
MCF2L-227ENST00000486806 NEU1Q99519 415 aa6.93□□□□□ -1.3
MCF2L-227ENST00000486806 OVOL2Q9BRP0 275 aa6.93□□□□□ -1.3
MCF2L-227ENST00000486806 PYGO2Q9BRQ0 406 aa6.93□□□□□ -1.3
MCF2L-227ENST00000486806 X6R8D5 127 aa6.93□□□□□ -1.3
MCF2L-227ENST00000486806 IGHV1OR15-1A0A075B7D0 117 aa6.92□□□□□ -1.3
MCF2L-227ENST00000486806 ANXA2RQ3ZCQ2 193 aa6.92□□□□□ -1.3
MCF2L-227ENST00000486806 MUC21Q5SSG8 566 aa6.92□□□□□ -1.3
MCF2L-227ENST00000486806 SPATA25Q9BR10 227 aa6.92□□□□□ -1.3
MCF2L-227ENST00000486806 RNASE7Q9H1E1 156 aaKnown RBP6.92□□□□□ -1.3
MCF2L-227ENST00000486806 RETNQ9HD89 108 aa6.92□□□□□ -1.3
MCF2L-227ENST00000486806 IGHV3OR16-12A0A075B7B8 117 aa6.91□□□□□ -1.3
MCF2L-227ENST00000486806 SPRY2O43597 315 aa6.91□□□□□ -1.3
MCF2L-227ENST00000486806 P01737 135 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 125.8 ms