RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 SAPCD1Q5SSQ6 148 aa7□□□□□ -1.29
TMEM39A-208ENST00000486159 SAMD13Q5VXD3 122 aa7□□□□□ -1.29
TMEM39A-208ENST00000486159 RASL11AQ6T310 242 aa7□□□□□ -1.29
TMEM39A-208ENST00000486159 Q86TA4 180 aa7□□□□□ -1.29
TMEM39A-208ENST00000486159 OR4B1Q8NGF8 309 aa7□□□□□ -1.29
TMEM39A-208ENST00000486159 SPATA25Q9BR10 227 aa7□□□□□ -1.29
TMEM39A-208ENST00000486159 SAV1Q9H4B6 383 aaPredicted RBP7□□□□□ -1.29
TMEM39A-208ENST00000486159 TRAV34A0A0B4J273 112 aa6.99□□□□□ -1.29
TMEM39A-208ENST00000486159 SMIM27A0A1W2PRY6 76 aa6.99□□□□□ -1.29
TMEM39A-208ENST00000486159 ZNF320A2RRD8 509 aa6.99□□□□□ -1.29
TMEM39A-208ENST00000486159 C5orf52A6NGY3 159 aa6.99□□□□□ -1.29
TMEM39A-208ENST00000486159 ZNF705GA8MUZ8 300 aaPredicted RBP6.99□□□□□ -1.29
TMEM39A-208ENST00000486159 MT-ND6P03923 174 aa6.99□□□□□ -1.29
TMEM39A-208ENST00000486159 OR5I1Q13606 314 aa6.99□□□□□ -1.29
TMEM39A-208ENST00000486159 FAM106AQ4KMX7 169 aa6.99□□□□□ -1.29
TMEM39A-208ENST00000486159 LCN12Q6JVE5 192 aa6.99□□□□□ -1.29
TMEM39A-208ENST00000486159 WDR73Q6P4I2 378 aa6.99□□□□□ -1.29
TMEM39A-208ENST00000486159 C16orf54Q6UWD8 224 aa6.99□□□□□ -1.29
TMEM39A-208ENST00000486159 GOLT1AQ6ZVE7 132 aa6.99□□□□□ -1.29
TMEM39A-208ENST00000486159 COX8CQ7Z4L0 72 aa6.99□□□□□ -1.29
TMEM39A-208ENST00000486159 GPHB5Q86YW7 130 aa6.99□□□□□ -1.29
TMEM39A-208ENST00000486159 EXOC3-AS1Q8N2X6 119 aa6.99□□□□□ -1.29
TMEM39A-208ENST00000486159 DAZAP1Q96EP5 407 aaKnown RBP6.99□□□□□ -1.29
TMEM39A-208ENST00000486159 LINC00479Q96M42 142 aa6.99□□□□□ -1.29
TMEM39A-208ENST00000486159 GFRA4Q9GZZ7 299 aa6.99□□□□□ -1.29
TMEM39A-208ENST00000486159 ZNF331Q9NQX6 463 aaPredicted RBP6.99□□□□□ -1.29
TMEM39A-208ENST00000486159 SIGLEC8Q9NYZ4 499 aa6.99□□□□□ -1.29
TMEM39A-208ENST00000486159 C2orf70A6NJV1 201 aa6.98□□□□□ -1.29
TMEM39A-208ENST00000486159 A8MWL6 223 aa6.98□□□□□ -1.29
TMEM39A-208ENST00000486159 UBE2CO00762 179 aa6.98□□□□□ -1.29
TMEM39A-208ENST00000486159 IGLV2-11P01706 119 aa6.98□□□□□ -1.29
TMEM39A-208ENST00000486159 TRGC2P03986 189 aa6.98□□□□□ -1.29
TMEM39A-208ENST00000486159 ACTL10Q5JWF8 245 aa6.98□□□□□ -1.29
TMEM39A-208ENST00000486159 GTSCR1Q86UQ5 136 aa6.98□□□□□ -1.29
TMEM39A-208ENST00000486159 ZFP82Q8N141 532 aa6.98□□□□□ -1.29
TMEM39A-208ENST00000486159 NUDT10Q8NFP7 164 aa6.98□□□□□ -1.29
TMEM39A-208ENST00000486159 TSKUQ8WUA8 353 aa6.98□□□□□ -1.29
TMEM39A-208ENST00000486159 NUDT11Q96G61 164 aa6.98□□□□□ -1.29
TMEM39A-208ENST00000486159 C17orf77Q96MU5 243 aa6.98□□□□□ -1.29
TMEM39A-208ENST00000486159 GNB1LQ9BYB4 327 aa6.98□□□□□ -1.29
TMEM39A-208ENST00000486159 RNASE7Q9H1E1 156 aaKnown RBP6.98□□□□□ -1.29
TMEM39A-208ENST00000486159 RPH3ALQ9UNE2 315 aa6.98□□□□□ -1.29
TMEM39A-208ENST00000486159 PSG8Q9UQ74 426 aa6.98□□□□□ -1.29
TMEM39A-208ENST00000486159 UFC1Q9Y3C8 167 aa6.98□□□□□ -1.29
TMEM39A-208ENST00000486159 UBR4Q5T4S7 5183 aa6.98□□□□□ -1.29
TMEM39A-208ENST00000486159 IGHV3-35A0A0C4DH35 117 aa6.97□□□□□ -1.29
TMEM39A-208ENST00000486159 C19orf71A6NCJ1 209 aa6.97□□□□□ -1.29
TMEM39A-208ENST00000486159 OR11H12B2RN74 326 aa6.97□□□□□ -1.29
TMEM39A-208ENST00000486159 NPIPB6E9PJ23 425 aa6.97□□□□□ -1.29
TMEM39A-208ENST00000486159 H3BTX0 84 aa6.97□□□□□ -1.29
TMEM39A-208ENST00000486159 SLC17A3O00476 420 aa6.97□□□□□ -1.29
TMEM39A-208ENST00000486159 PHOX2AO14813 284 aa6.97□□□□□ -1.29
TMEM39A-208ENST00000486159 P01737 135 aa6.97□□□□□ -1.29
TMEM39A-208ENST00000486159 SNRPCP09234 159 aaKnown RBP6.97□□□□□ -1.29
TMEM39A-208ENST00000486159 CT45A10P0DMU9 189 aa6.97□□□□□ -1.29
TMEM39A-208ENST00000486159 TM4SF20Q53R12 229 aa6.97□□□□□ -1.29
TMEM39A-208ENST00000486159 UNQ9165/PRO28630Q6UXU0 137 aa6.97□□□□□ -1.29
TMEM39A-208ENST00000486159 ATP5L2Q7Z4Y8 100 aa6.97□□□□□ -1.29
TMEM39A-208ENST00000486159 PRNTQ86SH4 94 aa6.97□□□□□ -1.29
TMEM39A-208ENST00000486159 GLMPQ8WWB7 406 aa6.97□□□□□ -1.29
TMEM39A-208ENST00000486159 NDFIP1Q9BT67 221 aa6.97□□□□□ -1.29
TMEM39A-208ENST00000486159 RPP21Q9H633 154 aaKnown RBP6.97□□□□□ -1.29
TMEM39A-208ENST00000486159 DAZ1Q9NQZ3 744 aaKnown RBP6.97□□□□□ -1.29
TMEM39A-208ENST00000486159 NAT8BQ9UHF3 227 aa6.97□□□□□ -1.29
TMEM39A-208ENST00000486159 ALMS1Q8TCU4 4167 aa6.97□□□□□ -1.29
TMEM39A-208ENST00000486159 TMEM213A2RRL7 107 aa6.96□□□□□ -1.3
TMEM39A-208ENST00000486159 CHEK1O14757 476 aa6.96□□□□□ -1.3
TMEM39A-208ENST00000486159 HIST1H2BKO60814 126 aa6.96□□□□□ -1.3
TMEM39A-208ENST00000486159 S100A8P05109 93 aa6.96□□□□□ -1.3
TMEM39A-208ENST00000486159 HIST1H2BJP06899 126 aa6.96□□□□□ -1.3
TMEM39A-208ENST00000486159 HOXA5P20719 270 aa6.96□□□□□ -1.3
TMEM39A-208ENST00000486159 CBLN1P23435 193 aa6.96□□□□□ -1.3
TMEM39A-208ENST00000486159 HIST1H2BOP23527 126 aa6.96□□□□□ -1.3
TMEM39A-208ENST00000486159 HIST1H2BBP33778 126 aa6.96□□□□□ -1.3
TMEM39A-208ENST00000486159 HIST1H2BDP58876 126 aa6.96□□□□□ -1.3
TMEM39A-208ENST00000486159 HIST1H2BCP62807 126 aa6.96□□□□□ -1.3
TMEM39A-208ENST00000486159 HIST2H2BEQ16778 126 aa6.96□□□□□ -1.3
TMEM39A-208ENST00000486159 COA6Q5JTJ3 125 aaKnown RBP6.96□□□□□ -1.3
TMEM39A-208ENST00000486159 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.96□□□□□ -1.3
TMEM39A-208ENST00000486159 Q6AWC8 147 aa6.96□□□□□ -1.3
TMEM39A-208ENST00000486159 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.96□□□□□ -1.3
TMEM39A-208ENST00000486159 TMEM61Q8N0U2 210 aa6.96□□□□□ -1.3
TMEM39A-208ENST00000486159 GBGT1Q8N5D6 347 aa6.96□□□□□ -1.3
TMEM39A-208ENST00000486159 DYNLRB2Q8TF09 96 aa6.96□□□□□ -1.3
TMEM39A-208ENST00000486159 HIST1H2BHQ93079 126 aa6.96□□□□□ -1.3
TMEM39A-208ENST00000486159 HIST1H2BNQ99877 126 aa6.96□□□□□ -1.3
TMEM39A-208ENST00000486159 HIST1H2BMQ99879 126 aa6.96□□□□□ -1.3
TMEM39A-208ENST00000486159 PPP1R14DQ9NXH3 145 aa6.96□□□□□ -1.3
TMEM39A-208ENST00000486159 PEMTQ9UBM1 199 aa6.96□□□□□ -1.3
TMEM39A-208ENST00000486159 TRAPPC1Q9Y5R8 145 aa6.96□□□□□ -1.3
TMEM39A-208ENST00000486159 IGHV7-4-1A0A0J9YVY3 117 aa6.95□□□□□ -1.3
TMEM39A-208ENST00000486159 XKRY2A2RUG3 117 aa6.95□□□□□ -1.3
TMEM39A-208ENST00000486159 LGALS9O00182 355 aa6.95□□□□□ -1.3
TMEM39A-208ENST00000486159 HLA-DQA1P01909 254 aa6.95□□□□□ -1.3
TMEM39A-208ENST00000486159 TRGC1P0CF51 173 aa6.95□□□□□ -1.3
TMEM39A-208ENST00000486159 RPS20P60866 119 aaKnown RBP6.95□□□□□ -1.3
TMEM39A-208ENST00000486159 SNRPEP62304 92 aaKnown RBP6.95□□□□□ -1.3
TMEM39A-208ENST00000486159 NHLRC2Q8NBF2 726 aa6.95□□□□□ -1.3
TMEM39A-208ENST00000486159 FRZBQ92765 325 aa6.95□□□□□ -1.3
TMEM39A-208ENST00000486159 SSBP4Q9BWG4 385 aaPredicted RBP6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 839.4 ms