RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 BTN1A1Q13410 526 aa9.8□□□□□ -0.84
VARS-225ENST00000482996 FAM74A1Q5RGS3 127 aa9.8□□□□□ -0.84
VARS-225ENST00000482996 OR10G4Q8NGN3 311 aa9.8□□□□□ -0.84
VARS-225ENST00000482996 OR10G9Q8NGN4 311 aa9.8□□□□□ -0.84
VARS-225ENST00000482996 OR10G7Q8NGN6 311 aa9.8□□□□□ -0.84
VARS-225ENST00000482996 FAM213BQ8TBF2 198 aa9.8□□□□□ -0.84
VARS-225ENST00000482996 RXFP4Q8TDU9 374 aa9.8□□□□□ -0.84
VARS-225ENST00000482996 ZNF492Q9P255 531 aa9.8□□□□□ -0.84
VARS-225ENST00000482996 TRBV7-9A0A0J9YWB2 115 aa9.79□□□□□ -0.84
VARS-225ENST00000482996 RBAKDNA6NC62 111 aa9.79□□□□□ -0.84
VARS-225ENST00000482996 SULT1A2P50226 295 aa9.79□□□□□ -0.84
VARS-225ENST00000482996 BLOC1S1P78537 153 aa9.79□□□□□ -0.84
VARS-225ENST00000482996 DPPA3Q6W0C5 159 aa9.79□□□□□ -0.84
VARS-225ENST00000482996 EIF4E3Q8N5X7 224 aaKnown RBP9.79□□□□□ -0.84
VARS-225ENST00000482996 CMTM2Q8TAZ6 248 aa9.79□□□□□ -0.84
VARS-225ENST00000482996 LINC00467Q9BRT7 94 aa9.79□□□□□ -0.84
VARS-225ENST00000482996 KRTAP17-1Q9BYP8 105 aa9.79□□□□□ -0.84
VARS-225ENST00000482996 OTORQ9NRC9 128 aa9.79□□□□□ -0.84
VARS-225ENST00000482996 ZNF324O75467 553 aaPredicted RBP9.78□□□□□ -0.84
VARS-225ENST00000482996 EIF3GO75821 320 aaKnown RBP eCLIP9.78□□□□□ -0.84
VARS-225ENST00000482996 CDC34P49427 236 aaPredicted RBP9.78□□□□□ -0.84
VARS-225ENST00000482996 DAZ2Q13117 558 aaKnown RBP9.78□□□□□ -0.84
VARS-225ENST00000482996 ANXA2RQ3ZCQ2 193 aa9.78□□□□□ -0.84
VARS-225ENST00000482996 RNF212Q495C1 297 aa9.78□□□□□ -0.84
VARS-225ENST00000482996 ZFAND2AQ8N6M9 145 aa9.78□□□□□ -0.84
VARS-225ENST00000482996 GAGE12BA1L429 117 aa9.77□□□□□ -0.85
VARS-225ENST00000482996 PGPA6NDG6 321 aa9.77□□□□□ -0.85
VARS-225ENST00000482996 DIRC3C9JPN6 131 aa9.77□□□□□ -0.85
VARS-225ENST00000482996 GAGE7O76087 117 aa9.77□□□□□ -0.85
VARS-225ENST00000482996 GAGE12FP0CL80 117 aa9.77□□□□□ -0.85
VARS-225ENST00000482996 GAGE12GP0CL81 117 aa9.77□□□□□ -0.85
VARS-225ENST00000482996 GAGE12IP0CL82 117 aa9.77□□□□□ -0.85
VARS-225ENST00000482996 LINC00612Q8N6U2 182 aa9.77□□□□□ -0.85
VARS-225ENST00000482996 Q8TAT8 98 aa9.77□□□□□ -0.85
VARS-225ENST00000482996 ACTR3CQ9C0K3 210 aaPredicted RBP9.77□□□□□ -0.85
VARS-225ENST00000482996 LENEPQ9Y5L5 61 aa9.77□□□□□ -0.85
VARS-225ENST00000482996 FRAS1Q86XX4 4008 aa9.77□□□□□ -0.85
VARS-225ENST00000482996 IGHV1OR15-1A0A075B7D0 117 aa9.76□□□□□ -0.85
VARS-225ENST00000482996 HMGB3O15347 200 aaKnown RBP9.76□□□□□ -0.85
VARS-225ENST00000482996 NUDT3O95989 172 aa9.76□□□□□ -0.85
VARS-225ENST00000482996 CLLU1Q5K131 121 aa9.76□□□□□ -0.85
VARS-225ENST00000482996 PRR9Q5T870 116 aa9.76□□□□□ -0.85
VARS-225ENST00000482996 ARL6IP6Q8N6S5 226 aa9.76□□□□□ -0.85
VARS-225ENST00000482996 ATG101Q9BSB4 218 aa9.76□□□□□ -0.85
VARS-225ENST00000482996 GSN-AS1Q9NRJ2 163 aa9.76□□□□□ -0.85
VARS-225ENST00000482996 RPH3ALQ9UNE2 315 aa9.76□□□□□ -0.85
VARS-225ENST00000482996 H2AFB1P0C5Y9 115 aa9.75□□□□□ -0.85
VARS-225ENST00000482996 STAG3L2P0CL84 134 aa9.75□□□□□ -0.85
VARS-225ENST00000482996 STAG3L3P0CL85 134 aa9.75□□□□□ -0.85
VARS-225ENST00000482996 ARL14EPLP0DKL9 152 aa9.75□□□□□ -0.85
VARS-225ENST00000482996 OR5I1Q13606 314 aa9.75□□□□□ -0.85
VARS-225ENST00000482996 NDUFA5Q16718 116 aa9.75□□□□□ -0.85
VARS-225ENST00000482996 IQCF2Q8IXL9 164 aa9.75□□□□□ -0.85
VARS-225ENST00000482996 RAB24Q969Q5 203 aa9.75□□□□□ -0.85
VARS-225ENST00000482996 TRGV2A0A075B6R0 118 aa9.74□□□□□ -0.85
VARS-225ENST00000482996 TRGV1A0A0A0MS02 117 aa9.74□□□□□ -0.85
VARS-225ENST00000482996 CTXND1A0A1B0GTU2 59 aa9.74□□□□□ -0.85
VARS-225ENST00000482996 TCL1AP56279 114 aa9.74□□□□□ -0.85
VARS-225ENST00000482996 FAM3BP58499 235 aaPredicted RBP9.74□□□□□ -0.85
VARS-225ENST00000482996 IBA57Q5T440 356 aaKnown RBP9.74□□□□□ -0.85
VARS-225ENST00000482996 Q6ZTI0 123 aa9.74□□□□□ -0.85
VARS-225ENST00000482996 GOLT1AQ6ZVE7 132 aa9.74□□□□□ -0.85
VARS-225ENST00000482996 C11orf72Q8NBR9 251 aa9.74□□□□□ -0.85
VARS-225ENST00000482996 PCNPQ8WW12 178 aaKnown RBP9.74□□□□□ -0.85
VARS-225ENST00000482996 MAP1LC3B2A6NCE7 125 aa9.73□□□□□ -0.85
VARS-225ENST00000482996 M0R2N4 97 aa9.73□□□□□ -0.85
VARS-225ENST00000482996 GCHFRP30047 84 aa9.73□□□□□ -0.85
VARS-225ENST00000482996 LGALS9BQ3B8N2 356 aa9.73□□□□□ -0.85
VARS-225ENST00000482996 SFT2D1Q8WV19 159 aa9.73□□□□□ -0.85
VARS-225ENST00000482996 MAP1LC3BQ9GZQ8 125 aa9.73□□□□□ -0.85
VARS-225ENST00000482996 TMEM167BQ9NRX6 74 aa9.73□□□□□ -0.85
VARS-225ENST00000482996 IGLV2-18A0A075B6J9 118 aa9.72□□□□□ -0.85
VARS-225ENST00000482996 TRAV26-1A0A087WT03 109 aa9.72□□□□□ -0.85
VARS-225ENST00000482996 A0A1B0GV50 99 aa9.72□□□□□ -0.85
VARS-225ENST00000482996 CXorf1O96002 111 aa9.72□□□□□ -0.85
VARS-225ENST00000482996 IFNA1P01562 189 aa9.72□□□□□ -0.85
VARS-225ENST00000482996 CCL18P55774 89 aa9.72□□□□□ -0.85
VARS-225ENST00000482996 ZNF415Q09FC8 603 aa9.72□□□□□ -0.85
VARS-225ENST00000482996 Q6AWC8 147 aa9.72□□□□□ -0.85
VARS-225ENST00000482996 LINC00336Q6ZUF6 198 aa9.72□□□□□ -0.85
VARS-225ENST00000482996 TMPRSS5Q9H3S3 457 aa9.72□□□□□ -0.85
VARS-225ENST00000482996 KLF12Q9Y4X4 402 aa9.72□□□□□ -0.85
VARS-225ENST00000482996 DNAH2Q9P225 4427 aa9.72□□□□□ -0.85
VARS-225ENST00000482996 SERTM2A0A1B0GWG4 89 aa9.71□□□□□ -0.86
VARS-225ENST00000482996 K7EQM0 130 aa9.71□□□□□ -0.86
VARS-225ENST00000482996 SPINK4O60575 86 aa9.71□□□□□ -0.86
VARS-225ENST00000482996 HOXA5P20719 270 aa9.71□□□□□ -0.86
VARS-225ENST00000482996 FHITP49789 147 aa9.71□□□□□ -0.86
VARS-225ENST00000482996 GNG5P63218 68 aa9.71□□□□□ -0.86
VARS-225ENST00000482996 MUC21Q5SSG8 566 aa9.71□□□□□ -0.86
VARS-225ENST00000482996 FAM159AQ6UWV7 190 aa9.71□□□□□ -0.86
VARS-225ENST00000482996 Q6ZQT7 251 aa9.71□□□□□ -0.86
VARS-225ENST00000482996 C5orf17Q8NAS9 161 aa9.71□□□□□ -0.86
VARS-225ENST00000482996 SUN5Q8TC36 379 aa9.71□□□□□ -0.86
VARS-225ENST00000482996 C18orf15Q96N68 181 aa9.71□□□□□ -0.86
VARS-225ENST00000482996 NDFIP1Q9BT67 221 aa9.71□□□□□ -0.86
VARS-225ENST00000482996 TP53TG3Q9ULZ0 132 aa9.71□□□□□ -0.86
VARS-225ENST00000482996 DNAH17Q9UFH2 4485 aa9.71□□□□□ -0.86
VARS-225ENST00000482996 TRGV11A0A075B6L2 103 aa9.7□□□□□ -0.86
VARS-225ENST00000482996 A0A0J9YY99 117 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms