RNA–Protein interactions for RNA: ENST00000482714.5

CCM2-215, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-215ENST00000482714 SMUG1Q53HV7 270 aa11.16□□□□□ -0.62
CCM2-215ENST00000482714 TOR2AQ5JU69 321 aa11.16□□□□□ -0.62
CCM2-215ENST00000482714 TVP23CQ96ET8 276 aa11.16□□□□□ -0.62
CCM2-215ENST00000482714 TRAV34A0A0B4J273 112 aa11.15□□□□□ -0.62
CCM2-215ENST00000482714 C7orf71A4D174 169 aa11.15□□□□□ -0.62
CCM2-215ENST00000482714 H7BYZ3 331 aa11.15□□□□□ -0.62
CCM2-215ENST00000482714 ZNF324O75467 553 aaPredicted RBP11.15□□□□□ -0.62
CCM2-215ENST00000482714 LTAP01374 205 aa11.15□□□□□ -0.62
CCM2-215ENST00000482714 GFI1BQ5VTD9 330 aa11.15□□□□□ -0.62
CCM2-215ENST00000482714 Q6AWC8 147 aa11.15□□□□□ -0.62
CCM2-215ENST00000482714 TMEM183AQ8IXX5 376 aa11.15□□□□□ -0.62
CCM2-215ENST00000482714 C1orf158Q8N1D5 194 aa11.15□□□□□ -0.62
CCM2-215ENST00000482714 Q8TAT8 98 aa11.15□□□□□ -0.62
CCM2-215ENST00000482714 SGK494Q96LW2 274 aa11.15□□□□□ -0.62
CCM2-215ENST00000482714 NIPSNAP3BQ9BS92 247 aa11.15□□□□□ -0.62
CCM2-215ENST00000482714 TRAV12-2A0A075B6T6 113 aa11.14□□□□□ -0.63
CCM2-215ENST00000482714 RNASE4P34096 147 aaKnown RBP11.14□□□□□ -0.63
CCM2-215ENST00000482714 RPL35P42766 123 aaKnown RBP11.14□□□□□ -0.63
CCM2-215ENST00000482714 BAGE2Q86Y30 109 aa11.14□□□□□ -0.63
CCM2-215ENST00000482714 OR11H2Q8NH07 326 aa11.14□□□□□ -0.63
CCM2-215ENST00000482714 PYGO2Q9BRQ0 406 aa11.14□□□□□ -0.63
CCM2-215ENST00000482714 LINC00467Q9BRT7 94 aa11.14□□□□□ -0.63
CCM2-215ENST00000482714 TMEM208Q9BTX3 173 aa11.14□□□□□ -0.63
CCM2-215ENST00000482714 TRAV21A0A0B4J279 112 aa11.13□□□□□ -0.63
CCM2-215ENST00000482714 MIFP14174 115 aa11.13□□□□□ -0.63
CCM2-215ENST00000482714 Q86TA4 180 aa11.13□□□□□ -0.63
CCM2-215ENST00000482714 LINC01587Q99440 93 aa11.13□□□□□ -0.63
CCM2-215ENST00000482714 MLST8Q9BVC4 326 aa11.13□□□□□ -0.63
CCM2-215ENST00000482714 HUWE1Q7Z6Z7 4374 aaKnown RBP11.13□□□□□ -0.63
CCM2-215ENST00000482714 TRAV12-3A0A0B4J271 114 aa11.12□□□□□ -0.63
CCM2-215ENST00000482714 FABP5P3A8MUU1 101 aa11.12□□□□□ -0.63
CCM2-215ENST00000482714 SRP19P09132 144 aaKnown RBP11.12□□□□□ -0.63
CCM2-215ENST00000482714 FAM74A3Q4VXF1 159 aa11.12□□□□□ -0.63
CCM2-215ENST00000482714 BIN3Q9NQY0 253 aa11.12□□□□□ -0.63
CCM2-215ENST00000482714 NBEAL2Q6ZNJ1 2754 aa11.12□□□□□ -0.63
CCM2-215ENST00000482714 C9JCJ5 164 aa11.12□□□□□ -0.63
CCM2-215ENST00000482714 KIR3DS1Q14943 382 aa11.12□□□□□ -0.63
CCM2-215ENST00000482714 ZNF493Q6ZR52 646 aa11.12□□□□□ -0.63
CCM2-215ENST00000482714 GCGP01275 180 aa11.11□□□□□ -0.63
CCM2-215ENST00000482714 PFN1P07737 140 aaKnown RBP11.11□□□□□ -0.63
CCM2-215ENST00000482714 GNG4P50150 75 aa11.11□□□□□ -0.63
CCM2-215ENST00000482714 BTN1A1Q13410 526 aa11.11□□□□□ -0.63
CCM2-215ENST00000482714 RRN3P1Q2M238 152 aa11.11□□□□□ -0.63
CCM2-215ENST00000482714 UQCC3Q6UW78 93 aa11.11□□□□□ -0.63
CCM2-215ENST00000482714 PARLQ9H300 379 aa11.11□□□□□ -0.63
CCM2-215ENST00000482714 LY96Q9Y6Y9 160 aa11.11□□□□□ -0.63
CCM2-215ENST00000482714 X6R8D5 127 aa11.11□□□□□ -0.63
CCM2-215ENST00000482714 TMEM189A5PLL7 270 aa11.1□□□□□ -0.63
CCM2-215ENST00000482714 J3KRW8 73 aa11.1□□□□□ -0.63
CCM2-215ENST00000482714 TDRG1Q3Y452 100 aa11.1□□□□□ -0.63
CCM2-215ENST00000482714 ANXA2RQ3ZCQ2 193 aa11.1□□□□□ -0.63
CCM2-215ENST00000482714 KCNS1Q96KK3 526 aa11.1□□□□□ -0.63
CCM2-215ENST00000482714 C8orf49Q96NF6 230 aa11.1□□□□□ -0.63
CCM2-215ENST00000482714 DERL1Q9BUN8 251 aa11.1□□□□□ -0.63
CCM2-215ENST00000482714 IGHV3OR16-12A0A075B7B8 117 aa11.09□□□□□ -0.63
CCM2-215ENST00000482714 LINC00862A6NCI5 91 aa11.09□□□□□ -0.63
CCM2-215ENST00000482714 RBMY1A1P0DJD3 496 aaKnown RBP11.09□□□□□ -0.63
CCM2-215ENST00000482714 RBMY1CP0DJD4 496 aa11.09□□□□□ -0.63
CCM2-215ENST00000482714 RBMY1FQ15415 496 aaKnown RBP11.09□□□□□ -0.63
CCM2-215ENST00000482714 ZNF674Q2M3X9 581 aa11.09□□□□□ -0.63
CCM2-215ENST00000482714 CENPWQ5EE01 88 aa11.09□□□□□ -0.63
CCM2-215ENST00000482714 PRR9Q5T870 116 aa11.09□□□□□ -0.63
CCM2-215ENST00000482714 FAM159AQ6UWV7 190 aa11.09□□□□□ -0.63
CCM2-215ENST00000482714 EIF4E3Q8N5X7 224 aaKnown RBP11.09□□□□□ -0.63
CCM2-215ENST00000482714 U3KQK5 164 aa11.09□□□□□ -0.63
CCM2-215ENST00000482714 IGHV1OR15-1A0A075B7D0 117 aa11.08□□□□□ -0.64
CCM2-215ENST00000482714 ZNF80P51504 273 aaPredicted RBP11.08□□□□□ -0.64
CCM2-215ENST00000482714 FAM162BQ5T6X4 162 aa11.08□□□□□ -0.64
CCM2-215ENST00000482714 ZNF727A8MUV8 499 aa11.07□□□□□ -0.64
CCM2-215ENST00000482714 CRIP1P50238 77 aa11.07□□□□□ -0.64
CCM2-215ENST00000482714 SRSF3P84103 164 aaKnown RBP11.07□□□□□ -0.64
CCM2-215ENST00000482714 ZC2HC1AQ96GY0 325 aa11.07□□□□□ -0.64
CCM2-215ENST00000482714 C11orf68Q9H3H3 251 aaKnown RBP11.07□□□□□ -0.64
CCM2-215ENST00000482714 TP53TG3Q9ULZ0 132 aa11.07□□□□□ -0.64
CCM2-215ENST00000482714 IGLV2-8P01709 118 aa11.06□□□□□ -0.64
CCM2-215ENST00000482714 SOHLH1Q5JUK2 328 aa11.06□□□□□ -0.64
CCM2-215ENST00000482714 Q8NAQ8 132 aa11.06□□□□□ -0.64
CCM2-215ENST00000482714 TMEM263Q8WUH6 116 aaKnown RBP11.06□□□□□ -0.64
CCM2-215ENST00000482714 C16orf74Q96GX8 76 aa11.06□□□□□ -0.64
CCM2-215ENST00000482714 SMIM7Q9BQ49 75 aa11.06□□□□□ -0.64
CCM2-215ENST00000482714 RETNQ9HD89 108 aa11.06□□□□□ -0.64
CCM2-215ENST00000482714 TRBV20OR9-2A0A075B6H5 130 aa11.06□□□□□ -0.64
CCM2-215ENST00000482714 CBY3A6NI87 242 aa11.06□□□□□ -0.64
CCM2-215ENST00000482714 C9JQL5 133 aa11.06□□□□□ -0.64
CCM2-215ENST00000482714 IBA57Q5T440 356 aaKnown RBP11.06□□□□□ -0.64
CCM2-215ENST00000482714 OCC1Q8TAD7 63 aa11.06□□□□□ -0.64
CCM2-215ENST00000482714 TRGV11A0A075B6L2 103 aa11.05□□□□□ -0.64
CCM2-215ENST00000482714 IGHV4-28A0A0C4DH34 117 aa11.05□□□□□ -0.64
CCM2-215ENST00000482714 ZNF705GA8MUZ8 300 aaPredicted RBP11.05□□□□□ -0.64
CCM2-215ENST00000482714 CEBPGP53567 150 aa11.05□□□□□ -0.64
CCM2-215ENST00000482714 TMEM241Q24JQ0 296 aa11.05□□□□□ -0.64
CCM2-215ENST00000482714 DAZAP1Q96EP5 407 aaKnown RBP11.05□□□□□ -0.64
CCM2-215ENST00000482714 SDF2L1Q9HCN8 221 aa11.05□□□□□ -0.64
CCM2-215ENST00000482714 TEX48A0A1B0GUV7 120 aa11.04□□□□□ -0.64
CCM2-215ENST00000482714 HTN1P15515 57 aa11.04□□□□□ -0.64
CCM2-215ENST00000482714 RNASE8Q8TDE3 154 aaKnown RBP11.04□□□□□ -0.64
CCM2-215ENST00000482714 SH2D1AO60880 128 aa11.03□□□□□ -0.64
CCM2-215ENST00000482714 MGST1P10620 155 aaKnown RBP11.03□□□□□ -0.64
CCM2-215ENST00000482714 AZU1P20160 251 aa11.03□□□□□ -0.64
CCM2-215ENST00000482714 LINC01559Q495D7 138 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms