RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 TFPI2P48307 235 aa11.1□□□□□ -0.63
CHD3-211ENST00000481999 HIST2H2BDQ6DRA6 164 aa11.1□□□□□ -0.63
CHD3-211ENST00000481999 STPG4Q8N801 248 aa11.1□□□□□ -0.63
CHD3-211ENST00000481999 ST20Q9HBF5 79 aa11.1□□□□□ -0.63
CHD3-211ENST00000481999 HSPB8Q9UJY1 196 aa11.1□□□□□ -0.63
CHD3-211ENST00000481999 SMAD7O15105 426 aaKnown RBP11.09□□□□□ -0.63
CHD3-211ENST00000481999 BUB3O43684 328 aa11.09□□□□□ -0.63
CHD3-211ENST00000481999 IGHG4P01861 327 aa11.09□□□□□ -0.63
CHD3-211ENST00000481999 IGF1P05019 195 aa11.09□□□□□ -0.63
CHD3-211ENST00000481999 EDN2P20800 178 aa11.09□□□□□ -0.63
CHD3-211ENST00000481999 LINC00173Q6ZV60 143 aa11.09□□□□□ -0.63
CHD3-211ENST00000481999 Q8TAT8 98 aa11.09□□□□□ -0.63
CHD3-211ENST00000481999 C8orf49Q96NF6 230 aa11.09□□□□□ -0.63
CHD3-211ENST00000481999 MAP1LC3CQ9BXW4 147 aa11.09□□□□□ -0.63
CHD3-211ENST00000481999 BEX4Q9NWD9 120 aaPredicted RBP11.09□□□□□ -0.63
CHD3-211ENST00000481999 FBLL1A6NHQ2 334 aaKnown RBP11.09□□□□□ -0.63
CHD3-211ENST00000481999 LOXL1Q08397 574 aaPredicted RBP11.09□□□□□ -0.63
CHD3-211ENST00000481999 PET117Q6UWS5 81 aa11.09□□□□□ -0.63
CHD3-211ENST00000481999 TPPP3Q9BW30 176 aa11.09□□□□□ -0.63
CHD3-211ENST00000481999 TMEM191AQ9H0A3 160 aa11.09□□□□□ -0.63
CHD3-211ENST00000481999 GATA3P23771 443 aa11.08□□□□□ -0.64
CHD3-211ENST00000481999 ZNF138P52744 262 aa11.08□□□□□ -0.64
CHD3-211ENST00000481999 SAPCD1Q5SSQ6 148 aa11.08□□□□□ -0.64
CHD3-211ENST00000481999 COX8CQ7Z4L0 72 aa11.08□□□□□ -0.64
CHD3-211ENST00000481999 TMEM189A5PLL7 270 aa11.08□□□□□ -0.64
CHD3-211ENST00000481999 S100A7P31151 101 aa11.08□□□□□ -0.64
CHD3-211ENST00000481999 RELQ04864 619 aaPredicted RBP11.08□□□□□ -0.64
CHD3-211ENST00000481999 ZNF493Q6ZR52 646 aa11.08□□□□□ -0.64
CHD3-211ENST00000481999 AP5S1Q9NUS5 200 aa11.08□□□□□ -0.64
CHD3-211ENST00000481999 CSN3P07498 182 aa11.07□□□□□ -0.64
CHD3-211ENST00000481999 KLK9Q2XQG4 91 aa11.07□□□□□ -0.64
CHD3-211ENST00000481999 KLK9Q9UKQ9 250 aa11.07□□□□□ -0.64
CHD3-211ENST00000481999 TRBV7-1A0A0A6YYK4 115 aa11.07□□□□□ -0.64
CHD3-211ENST00000481999 PRAC2D3DTV9 90 aa11.07□□□□□ -0.64
CHD3-211ENST00000481999 NPSP0C0P6 89 aa11.07□□□□□ -0.64
CHD3-211ENST00000481999 ARL3P36405 182 aa11.07□□□□□ -0.64
CHD3-211ENST00000481999 VGLL1Q99990 258 aa11.07□□□□□ -0.64
CHD3-211ENST00000481999 HSBP1L1C9JCN9 74 aa11.06□□□□□ -0.64
CHD3-211ENST00000481999 SH2D1AO60880 128 aa11.06□□□□□ -0.64
CHD3-211ENST00000481999 HINT1P49773 126 aaPredicted RBP11.06□□□□□ -0.64
CHD3-211ENST00000481999 SORL1Q92673 2214 aa11.06□□□□□ -0.64
CHD3-211ENST00000481999 HOXA3O43365 443 aaPredicted RBP11.06□□□□□ -0.64
CHD3-211ENST00000481999 CRIP2P52943 208 aaPredicted RBP11.06□□□□□ -0.64
CHD3-211ENST00000481999 FA2HQ7L5A8 372 aa11.06□□□□□ -0.64
CHD3-211ENST00000481999 IGKV3-7A0A075B6H7 116 aa11.05□□□□□ -0.64
CHD3-211ENST00000481999 LYZL1Q6UWQ5 148 aa11.05□□□□□ -0.64
CHD3-211ENST00000481999 PRSS3P2Q8NHM4 247 aa11.05□□□□□ -0.64
CHD3-211ENST00000481999 PRR25Q96S07 402 aa11.05□□□□□ -0.64
CHD3-211ENST00000481999 DEFB1P60022 68 aa11.05□□□□□ -0.64
CHD3-211ENST00000481999 ERCC8Q13216 396 aa11.05□□□□□ -0.64
CHD3-211ENST00000481999 OR4X2Q8NGF9 303 aa11.05□□□□□ -0.64
CHD3-211ENST00000481999 TMSB15BA0A087X1C1 80 aa11.04□□□□□ -0.64
CHD3-211ENST00000481999 FAM223BA6NKX1 122 aa11.04□□□□□ -0.64
CHD3-211ENST00000481999 RAB9AP51151 201 aa11.04□□□□□ -0.64
CHD3-211ENST00000481999 RPS20P60866 119 aaKnown RBP11.04□□□□□ -0.64
CHD3-211ENST00000481999 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.04□□□□□ -0.64
CHD3-211ENST00000481999 FAM223AQ8IWN6 122 aa11.04□□□□□ -0.64
CHD3-211ENST00000481999 OR10AG1Q8NH19 301 aa11.04□□□□□ -0.64
CHD3-211ENST00000481999 U3KQK5 164 aa11.04□□□□□ -0.64
CHD3-211ENST00000481999 OTOGQ6ZRI0 2925 aa11.03□□□□□ -0.64
CHD3-211ENST00000481999 hDV102S1A0JD36 115 aa11.03□□□□□ -0.64
CHD3-211ENST00000481999 BMI1P35226 326 aa11.03□□□□□ -0.64
CHD3-211ENST00000481999 CFHR3Q02985 330 aa11.03□□□□□ -0.64
CHD3-211ENST00000481999 LINC01545Q5VT33 79 aa11.03□□□□□ -0.64
CHD3-211ENST00000481999 FAM104BQ5XKR9 115 aa11.03□□□□□ -0.64
CHD3-211ENST00000481999 ORAOV1Q8WV07 137 aa11.03□□□□□ -0.64
CHD3-211ENST00000481999 FSHBP01225 129 aa11.03□□□□□ -0.64
CHD3-211ENST00000481999 IGLV1-40P01703 118 aa11.03□□□□□ -0.64
CHD3-211ENST00000481999 ANKRD39Q53RE8 183 aa11.03□□□□□ -0.64
CHD3-211ENST00000481999 SLC25A34Q6PIV7 304 aa11.03□□□□□ -0.64
CHD3-211ENST00000481999 METTL26Q96S19 204 aa11.03□□□□□ -0.64
CHD3-211ENST00000481999 ZNF747Q9BV97 191 aa11.03□□□□□ -0.64
CHD3-211ENST00000481999 ANK3Q12955 4377 aaKnown RBP11.03□□□□□ -0.64
CHD3-211ENST00000481999 MUC21A0A0G2JKD1 596 aa11.02□□□□□ -0.64
CHD3-211ENST00000481999 MUC21A0A140T8X8 626 aa11.02□□□□□ -0.64
CHD3-211ENST00000481999 TMEM213A2RRL7 107 aa11.02□□□□□ -0.64
CHD3-211ENST00000481999 CYSRT1A8MQ03 144 aa11.02□□□□□ -0.64
CHD3-211ENST00000481999 D6R8Y8 96 aa11.02□□□□□ -0.64
CHD3-211ENST00000481999 J3QLI3 93 aa11.02□□□□□ -0.64
CHD3-211ENST00000481999 MUC21Q5SSG8 566 aa11.02□□□□□ -0.64
CHD3-211ENST00000481999 ORMDL3Q8N138 153 aa11.02□□□□□ -0.64
CHD3-211ENST00000481999 MS4A6AQ9H2W1 248 aa11.02□□□□□ -0.64
CHD3-211ENST00000481999 SRD5A1P18405 259 aa11.02□□□□□ -0.65
CHD3-211ENST00000481999 ZNF80P51504 273 aaPredicted RBP11.02□□□□□ -0.65
CHD3-211ENST00000481999 TM4SF20Q53R12 229 aa11.02□□□□□ -0.65
CHD3-211ENST00000481999 PRELID3AQ96N28 172 aa11.02□□□□□ -0.65
CHD3-211ENST00000481999 TIMM8BQ9Y5J9 83 aaPredicted RBP11.02□□□□□ -0.65
CHD3-211ENST00000481999 H0Y8G0 127 aa11.01□□□□□ -0.65
CHD3-211ENST00000481999 Q6ZQT7 251 aa11.01□□□□□ -0.65
CHD3-211ENST00000481999 VPREB3Q9UKI3 123 aa11.01□□□□□ -0.65
CHD3-211ENST00000481999 TRAV8-2A0A0B4J237 113 aa11.01□□□□□ -0.65
CHD3-211ENST00000481999 IFI27P40305 119 aaPredicted RBP11.01□□□□□ -0.65
CHD3-211ENST00000481999 Q6YL49 198 aa11.01□□□□□ -0.65
CHD3-211ENST00000481999 AMN1Q8IY45 258 aa11.01□□□□□ -0.65
CHD3-211ENST00000481999 LRRC75A-AS1Q8N1F1 130 aa11.01□□□□□ -0.65
CHD3-211ENST00000481999 FER1L6-AS1Q8NA97 138 aa11.01□□□□□ -0.65
CHD3-211ENST00000481999 WNK1Q9H4A3 2382 aa11□□□□□ -0.65
CHD3-211ENST00000481999 SRSF2Q01130 221 aaKnown RBP11□□□□□ -0.65
CHD3-211ENST00000481999 C8orf86Q6ZUL3 223 aa11□□□□□ -0.65
CHD3-211ENST00000481999 SCRT2Q9NQ03 307 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms