RNA–Protein interactions for RNA: ENST00000480242.1

SNRNP200-203, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 3,409 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-203ENST00000480242 ZFAND6Q6FIF0 208 aa6.67□□□□□ -1.34
SNRNP200-203ENST00000480242 TEX29Q8N6K0 151 aa6.67□□□□□ -1.34
SNRNP200-203ENST00000480242 IGHV3OR16-10A0A075B7F0 116 aa6.67□□□□□ -1.34
SNRNP200-203ENST00000480242 LINC01548A6NM66 108 aa6.67□□□□□ -1.34
SNRNP200-203ENST00000480242 FAM104BQ5XKR9 115 aa6.67□□□□□ -1.34
SNRNP200-203ENST00000480242 HCP5Q6MZN7 132 aa6.67□□□□□ -1.34
SNRNP200-203ENST00000480242 LYPD2Q6UXB3 125 aa6.67□□□□□ -1.34
SNRNP200-203ENST00000480242 HARBI1Q96MB7 349 aa6.67□□□□□ -1.34
SNRNP200-203ENST00000480242 SMG1Q96Q15 3661 aaKnown RBP6.67□□□□□ -1.34
SNRNP200-203ENST00000480242 DOPEY1Q5JWR5 2465 aa6.67□□□□□ -1.34
SNRNP200-203ENST00000480242 TRAV40A0A0B4J280 105 aa6.66□□□□□ -1.34
SNRNP200-203ENST00000480242 OVOL3O00110 214 aa6.66□□□□□ -1.34
SNRNP200-203ENST00000480242 GNLYP22749 145 aa6.66□□□□□ -1.34
SNRNP200-203ENST00000480242 SMCPP49901 116 aaPredicted RBP6.66□□□□□ -1.34
SNRNP200-203ENST00000480242 WT1-ASQ06250 92 aa6.66□□□□□ -1.34
SNRNP200-203ENST00000480242 A0A1B0GW15 77 aa6.66□□□□□ -1.34
SNRNP200-203ENST00000480242 C17orf100A8MU93 164 aa6.66□□□□□ -1.34
SNRNP200-203ENST00000480242 B9A039 149 aa6.66□□□□□ -1.34
SNRNP200-203ENST00000480242 H3BVH4 76 aa6.66□□□□□ -1.34
SNRNP200-203ENST00000480242 ADIPOQQ15848 244 aa6.66□□□□□ -1.34
SNRNP200-203ENST00000480242 CRYBG3Q68DQ2 2970 aa6.66□□□□□ -1.34
SNRNP200-203ENST00000480242 DSCAMO60469 2012 aa6.66□□□□□ -1.34
SNRNP200-203ENST00000480242 ZNF785A8K8V0 405 aa6.66□□□□□ -1.34
SNRNP200-203ENST00000480242 EVI2AP22794 236 aa6.66□□□□□ -1.34
SNRNP200-203ENST00000480242 Q6AWC8 147 aa6.66□□□□□ -1.34
SNRNP200-203ENST00000480242 KIR2DL4Q99706 377 aa6.66□□□□□ -1.34
SNRNP200-203ENST00000480242 LYZP61626 148 aa6.65□□□□□ -1.34
SNRNP200-203ENST00000480242 TWIST1Q15672 202 aa6.65□□□□□ -1.34
SNRNP200-203ENST00000480242 ITPR1Q14643 2758 aa6.65□□□□□ -1.34
SNRNP200-203ENST00000480242 DPM2O94777 84 aa6.65□□□□□ -1.35
SNRNP200-203ENST00000480242 IGLV2-11P01706 119 aa6.65□□□□□ -1.35
SNRNP200-203ENST00000480242 IL4P05112 153 aa6.65□□□□□ -1.35
SNRNP200-203ENST00000480242 GP9P14770 177 aa6.65□□□□□ -1.35
SNRNP200-203ENST00000480242 NDUFA4L2Q9NRX3 87 aa6.65□□□□□ -1.35
SNRNP200-203ENST00000480242 E7EQL1 145 aa6.64□□□□□ -1.35
SNRNP200-203ENST00000480242 HOXA3O43365 443 aaPredicted RBP6.64□□□□□ -1.35
SNRNP200-203ENST00000480242 SCGB2A1O75556 95 aa6.64□□□□□ -1.35
SNRNP200-203ENST00000480242 NDUFA3O95167 84 aa6.64□□□□□ -1.35
SNRNP200-203ENST00000480242 RBP4P02753 201 aa6.64□□□□□ -1.35
SNRNP200-203ENST00000480242 RPL32P62910 135 aaKnown RBP6.64□□□□□ -1.35
SNRNP200-203ENST00000480242 POU2AF1Q16633 256 aa6.64□□□□□ -1.35
SNRNP200-203ENST00000480242 C17orf58Q2M2W7 97 aa6.64□□□□□ -1.35
SNRNP200-203ENST00000480242 CFAP126Q5VTH2 177 aa6.64□□□□□ -1.35
SNRNP200-203ENST00000480242 NUP37Q8NFH4 326 aa6.64□□□□□ -1.35
SNRNP200-203ENST00000480242 DLX4Q92988 240 aaPredicted RBP6.64□□□□□ -1.35
SNRNP200-203ENST00000480242 RNASE6Q93091 150 aaKnown RBP6.64□□□□□ -1.35
SNRNP200-203ENST00000480242 C8orf49Q96NF6 230 aa6.64□□□□□ -1.35
SNRNP200-203ENST00000480242 CFAP46Q8IYW2 2715 aa6.64□□□□□ -1.35
SNRNP200-203ENST00000480242 TNFRSF13BO14836 293 aaPredicted RBP6.64□□□□□ -1.35
SNRNP200-203ENST00000480242 GAS8-AS1O95177 125 aa6.64□□□□□ -1.35
SNRNP200-203ENST00000480242 CRIP1P50238 77 aa6.64□□□□□ -1.35
SNRNP200-203ENST00000480242 SUB1P53999 127 aaKnown RBP eCLIP6.64□□□□□ -1.354e-6■■□□□ 11.9
SNRNP200-203ENST00000480242 ATP5IP56385 69 aaPredicted RBP6.64□□□□□ -1.35
SNRNP200-203ENST00000480242 CDSNQ15517 529 aa6.64□□□□□ -1.35
SNRNP200-203ENST00000480242 ZFP2Q6ZN57 461 aa6.64□□□□□ -1.35
SNRNP200-203ENST00000480242 C17orf77Q96MU5 243 aa6.64□□□□□ -1.35
SNRNP200-203ENST00000480242 HIF1ANQ9NWT6 349 aa6.64□□□□□ -1.35
SNRNP200-203ENST00000480242 MRPL35Q9NZE8 188 aaKnown RBP6.64□□□□□ -1.35
SNRNP200-203ENST00000480242 FN1P02751 2386 aaKnown RBP6.64□□□□□ -1.35
SNRNP200-203ENST00000480242 SRRM5B3KS81 715 aa6.64□□□□□ -1.35
SNRNP200-203ENST00000480242 CCDC179H3BU77 68 aa6.64□□□□□ -1.35
SNRNP200-203ENST00000480242 RPEQ96AT9 228 aa6.64□□□□□ -1.35
SNRNP200-203ENST00000480242 CARD19Q96LW7 228 aa6.64□□□□□ -1.35
SNRNP200-203ENST00000480242 OTORQ9NRC9 128 aa6.64□□□□□ -1.35
SNRNP200-203ENST00000480242 PRRC2AP48634 2157 aaKnown RBP6.64□□□□□ -1.35
SNRNP200-203ENST00000480242 LINC01549A6NIU2 74 aa6.63□□□□□ -1.35
SNRNP200-203ENST00000480242 M0R3E3 92 aa6.63□□□□□ -1.35
SNRNP200-203ENST00000480242 TMEM158Q8WZ71 300 aa6.63□□□□□ -1.35
SNRNP200-203ENST00000480242 MAP1LC3AQ9H492 121 aa6.63□□□□□ -1.35
SNRNP200-203ENST00000480242 S4R3C0 116 aa6.63□□□□□ -1.35
SNRNP200-203ENST00000480242 AKAP9Q99996 3911 aa6.63□□□□□ -1.35
SNRNP200-203ENST00000480242 NCBP2LA6PVI3 153 aaKnown RBP6.63□□□□□ -1.35
SNRNP200-203ENST00000480242 MORN3Q6PF18 240 aaPredicted RBP6.63□□□□□ -1.35
SNRNP200-203ENST00000480242 PPDPFLQ8WWR9 84 aa6.63□□□□□ -1.35
SNRNP200-203ENST00000480242 TIMD4Q96H15 378 aa6.63□□□□□ -1.35
SNRNP200-203ENST00000480242 VKORC1Q9BQB6 163 aa6.63□□□□□ -1.35
SNRNP200-203ENST00000480242 MRPL20Q9BYC9 149 aaKnown RBP6.63□□□□□ -1.35
SNRNP200-203ENST00000480242 RPUSD1Q9UJJ7 312 aaKnown RBP6.63□□□□□ -1.35
SNRNP200-203ENST00000480242 C2CD3Q4AC94 2353 aa6.63□□□□□ -1.35
SNRNP200-203ENST00000480242 IGLV3-9A0A075B6K5 115 aa6.63□□□□□ -1.35
SNRNP200-203ENST00000480242 THBDP07204 575 aa6.63□□□□□ -1.35
SNRNP200-203ENST00000480242 GATA1P15976 413 aaPredicted RBP6.63□□□□□ -1.35
SNRNP200-203ENST00000480242 PRTN3P24158 256 aa6.63□□□□□ -1.35
SNRNP200-203ENST00000480242 PAX8Q06710 450 aa6.63□□□□□ -1.35
SNRNP200-203ENST00000480242 ZNF493Q6ZR52 646 aa6.63□□□□□ -1.35
SNRNP200-203ENST00000480242 FAM110AQ9BQ89 295 aa6.63□□□□□ -1.35
SNRNP200-203ENST00000480242 LINC00574Q9H8X3 128 aa6.63□□□□□ -1.35
SNRNP200-203ENST00000480242 HIGD1AQ9Y241 93 aa6.63□□□□□ -1.35
SNRNP200-203ENST00000480242 NHLRC4P0CG21 123 aaPredicted RBP6.62□□□□□ -1.35
SNRNP200-203ENST00000480242 SRSF1Q07955 248 aaKnown RBP eCLIP6.62□□□□□ -1.35
SNRNP200-203ENST00000480242 THAP8Q8NA92 274 aa6.62□□□□□ -1.35
SNRNP200-203ENST00000480242 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.62□□□□□ -1.35
SNRNP200-203ENST00000480242 MSRB1Q9NZV6 116 aa6.62□□□□□ -1.35
SNRNP200-203ENST00000480242 IGHV3-35A0A0C4DH35 117 aa6.62□□□□□ -1.35
SNRNP200-203ENST00000480242 GAGE12JA6NER3 117 aa6.62□□□□□ -1.35
SNRNP200-203ENST00000480242 GAGE7O76087 117 aa6.62□□□□□ -1.35
SNRNP200-203ENST00000480242 GAGE12FP0CL80 117 aa6.62□□□□□ -1.35
SNRNP200-203ENST00000480242 GAGE12GP0CL81 117 aa6.62□□□□□ -1.35
SNRNP200-203ENST00000480242 GAGE12IP0CL82 117 aa6.62□□□□□ -1.35
SNRNP200-203ENST00000480242 GAGE4Q13068 117 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms