RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 TRGV11A0A075B6L2 103 aa9.98□□□□□ -0.81
SMARCE1-209ENST00000478349 INMT-MINDY4F8WBC2 141 aa9.98□□□□□ -0.81
SMARCE1-209ENST00000478349 SIVA1O15304 175 aa9.98□□□□□ -0.81
SMARCE1-209ENST00000478349 SIX6O95475 246 aa9.98□□□□□ -0.81
SMARCE1-209ENST00000478349 DEFA1P59665 94 aa9.98□□□□□ -0.81
SMARCE1-209ENST00000478349 DEFA3P59666 94 aa9.98□□□□□ -0.81
SMARCE1-209ENST00000478349 MRPL23Q16540 153 aaKnown RBP9.98□□□□□ -0.81
SMARCE1-209ENST00000478349 CMTM2Q8TAZ6 248 aa9.98□□□□□ -0.81
SMARCE1-209ENST00000478349 PCNPQ8WW12 178 aaKnown RBP9.98□□□□□ -0.81
SMARCE1-209ENST00000478349 FXYD5Q96DB9 178 aa9.98□□□□□ -0.81
SMARCE1-209ENST00000478349 VSIG2Q96IQ7 327 aa9.98□□□□□ -0.81
SMARCE1-209ENST00000478349 PTTG2Q9NZH5 202 aa9.98□□□□□ -0.81
SMARCE1-209ENST00000478349 OR5AC2Q9NZP5 309 aa9.98□□□□□ -0.81
SMARCE1-209ENST00000478349 KLF12Q9Y4X4 402 aa9.98□□□□□ -0.81
SMARCE1-209ENST00000478349 TRAV9-2A0A087WT02 112 aa9.97□□□□□ -0.81
SMARCE1-209ENST00000478349 SSNA1O43805 119 aa9.97□□□□□ -0.81
SMARCE1-209ENST00000478349 RANP62826 216 aaKnown RBP9.97□□□□□ -0.81
SMARCE1-209ENST00000478349 ZNF266Q14584 549 aa9.97□□□□□ -0.81
SMARCE1-209ENST00000478349 LINC01559Q495D7 138 aa9.97□□□□□ -0.81
SMARCE1-209ENST00000478349 FFAR4Q5NUL3 377 aa9.97□□□□□ -0.81
SMARCE1-209ENST00000478349 FAM159AQ6UWV7 190 aa9.97□□□□□ -0.81
SMARCE1-209ENST00000478349 PPP1R1CQ8WVI7 109 aa9.97□□□□□ -0.81
SMARCE1-209ENST00000478349 PHYHIPLQ96FC7 376 aa9.97□□□□□ -0.81
SMARCE1-209ENST00000478349 MRPL16Q9NX20 251 aaKnown RBP9.97□□□□□ -0.81
SMARCE1-209ENST00000478349 DNAH17Q9UFH2 4485 aa9.97□□□□□ -0.81
SMARCE1-209ENST00000478349 TRGV4A0A0C4DH28 118 aa9.96□□□□□ -0.82
SMARCE1-209ENST00000478349 K7EP13 123 aa9.96□□□□□ -0.82
SMARCE1-209ENST00000478349 NFE4Q86UQ8 179 aa9.96□□□□□ -0.82
SMARCE1-209ENST00000478349 MAPKAPK5-AS1Q8N8E1 139 aa9.96□□□□□ -0.82
SMARCE1-209ENST00000478349 Q8TAT8 98 aa9.96□□□□□ -0.82
SMARCE1-209ENST00000478349 TMED6Q8WW62 240 aa9.96□□□□□ -0.82
SMARCE1-209ENST00000478349 SPXQ9BT56 116 aa9.96□□□□□ -0.82
SMARCE1-209ENST00000478349 KRTAP1-5Q9BYS1 174 aa9.96□□□□□ -0.82
SMARCE1-209ENST00000478349 HHLA3Q9XRX5 114 aa9.96□□□□□ -0.82
SMARCE1-209ENST00000478349 NXPH4O95158 308 aa9.95□□□□□ -0.82
SMARCE1-209ENST00000478349 IGHV3-53P01767 116 aa9.95□□□□□ -0.82
SMARCE1-209ENST00000478349 ORM1P02763 201 aa9.95□□□□□ -0.82
SMARCE1-209ENST00000478349 LINC00315P59091 139 aa9.95□□□□□ -0.82
SMARCE1-209ENST00000478349 ERVFC1-1P60608 527 aa9.95□□□□□ -0.82
SMARCE1-209ENST00000478349 NEGR1Q7Z3B1 354 aa9.95□□□□□ -0.82
SMARCE1-209ENST00000478349 HSPB11Q9Y547 144 aa9.95□□□□□ -0.82
SMARCE1-209ENST00000478349 DNAH11Q96DT5 4516 aa9.94□□□□□ -0.82
SMARCE1-209ENST00000478349 A0A1W2PPV4 95 aa9.94□□□□□ -0.82
SMARCE1-209ENST00000478349 RPL12P30050 165 aaKnown RBP9.94□□□□□ -0.82
SMARCE1-209ENST00000478349 SRIP30626 198 aa9.94□□□□□ -0.82
SMARCE1-209ENST00000478349 CRYBA4P53673 196 aa9.94□□□□□ -0.82
SMARCE1-209ENST00000478349 ACOT6Q3I5F7 207 aaPredicted RBP9.94□□□□□ -0.82
SMARCE1-209ENST00000478349 PRR9Q5T870 116 aa9.94□□□□□ -0.82
SMARCE1-209ENST00000478349 Q6AWC8 147 aa9.94□□□□□ -0.82
SMARCE1-209ENST00000478349 PQLC2Q6ZP29 291 aa9.94□□□□□ -0.82
SMARCE1-209ENST00000478349 ARL6IP6Q8N6S5 226 aa9.94□□□□□ -0.82
SMARCE1-209ENST00000478349 C8orf49Q96NF6 230 aa9.94□□□□□ -0.82
SMARCE1-209ENST00000478349 OTORQ9NRC9 128 aa9.94□□□□□ -0.82
SMARCE1-209ENST00000478349 TP53TG3Q9ULZ0 132 aa9.94□□□□□ -0.82
SMARCE1-209ENST00000478349 C9JCJ5 164 aa9.93□□□□□ -0.82
SMARCE1-209ENST00000478349 H0YIZ8 118 aa9.93□□□□□ -0.82
SMARCE1-209ENST00000478349 MPC2O95563 127 aa9.93□□□□□ -0.82
SMARCE1-209ENST00000478349 MUC21Q5SSG8 566 aa9.93□□□□□ -0.82
SMARCE1-209ENST00000478349 SH2D6Q7Z4S9 175 aa9.93□□□□□ -0.82
SMARCE1-209ENST00000478349 TXNDC17Q9BRA2 123 aa9.93□□□□□ -0.82
SMARCE1-209ENST00000478349 MARVELD1Q9BSK0 173 aa9.93□□□□□ -0.82
SMARCE1-209ENST00000478349 LY96Q9Y6Y9 160 aa9.93□□□□□ -0.82
SMARCE1-209ENST00000478349 PKD1P98161 4303 aa9.92□□□□□ -0.82
SMARCE1-209ENST00000478349 DIRC3C9JPN6 131 aa9.92□□□□□ -0.82
SMARCE1-209ENST00000478349 H2BFSP57053 126 aa9.92□□□□□ -0.82
SMARCE1-209ENST00000478349 TMEM183BQ1AE95 376 aa9.92□□□□□ -0.82
SMARCE1-209ENST00000478349 CDPF1Q6NVV7 123 aa9.92□□□□□ -0.82
SMARCE1-209ENST00000478349 IQCF2Q8IXL9 164 aa9.92□□□□□ -0.82
SMARCE1-209ENST00000478349 TMEM183AQ8IXX5 376 aa9.92□□□□□ -0.82
SMARCE1-209ENST00000478349 OR10G4Q8NGN3 311 aa9.92□□□□□ -0.82
SMARCE1-209ENST00000478349 HYLS1Q96M11 299 aa9.92□□□□□ -0.82
SMARCE1-209ENST00000478349 NDFIP1Q9BT67 221 aa9.92□□□□□ -0.82
SMARCE1-209ENST00000478349 TRAV21A0A0B4J279 112 aa9.91□□□□□ -0.82
SMARCE1-209ENST00000478349 SERTM2A0A1B0GWG4 89 aa9.91□□□□□ -0.82
SMARCE1-209ENST00000478349 EVI2AP22794 236 aa9.91□□□□□ -0.82
SMARCE1-209ENST00000478349 FHL2Q14192 279 aa9.91□□□□□ -0.82
SMARCE1-209ENST00000478349 TDRG1Q3Y452 100 aa9.91□□□□□ -0.82
SMARCE1-209ENST00000478349 RASL10AQ92737 203 aa9.91□□□□□ -0.82
SMARCE1-209ENST00000478349 KCNS1Q96KK3 526 aa9.91□□□□□ -0.82
SMARCE1-209ENST00000478349 PGPEP1Q9NXJ5 209 aa9.91□□□□□ -0.82
SMARCE1-209ENST00000478349 NAGKQ9UJ70 344 aa9.91□□□□□ -0.82
SMARCE1-209ENST00000478349 RPH3ALQ9UNE2 315 aa9.91□□□□□ -0.82
SMARCE1-209ENST00000478349 TRAV4A0A0B4J268 109 aa9.9□□□□□ -0.82
SMARCE1-209ENST00000478349 K7EQM0 130 aa9.9□□□□□ -0.82
SMARCE1-209ENST00000478349 LYPD5Q6UWN5 251 aa9.9□□□□□ -0.82
SMARCE1-209ENST00000478349 Q8N1X5 172 aa9.9□□□□□ -0.82
SMARCE1-209ENST00000478349 C10orf126Q8N4M7 172 aa9.9□□□□□ -0.82
SMARCE1-209ENST00000478349 SMIM3Q9BZL3 60 aa9.9□□□□□ -0.82
SMARCE1-209ENST00000478349 SDF2L1Q9HCN8 221 aa9.9□□□□□ -0.82
SMARCE1-209ENST00000478349 MBD2Q9UBB5 411 aa9.9□□□□□ -0.82
SMARCE1-209ENST00000478349 PGPA6NDG6 321 aa9.89□□□□□ -0.83
SMARCE1-209ENST00000478349 M0R2P5 195 aa9.89□□□□□ -0.83
SMARCE1-209ENST00000478349 OR4C5Q8NGB2 326 aa9.89□□□□□ -0.83
SMARCE1-209ENST00000478349 MDFICQ9P1T7 246 aa9.89□□□□□ -0.83
SMARCE1-209ENST00000478349 MUC4Q99102 2169 aa9.88□□□□□ -0.83
SMARCE1-209ENST00000478349 K7EQD1 137 aa9.88□□□□□ -0.83
SMARCE1-209ENST00000478349 GYPEP15421 78 aa9.88□□□□□ -0.83
SMARCE1-209ENST00000478349 LCE2CQ5TA81 110 aa9.88□□□□□ -0.83
SMARCE1-209ENST00000478349 GOLT1AQ6ZVE7 132 aa9.88□□□□□ -0.83
SMARCE1-209ENST00000478349 ZNF479Q96JC4 524 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms