RNA–Protein interactions for RNA: ENST00000478021.1

TRAF4-211, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-211ENST00000478021 LINC00612Q8N6U2 182 aa16■□□□□ 0.15
TRAF4-211ENST00000478021 ZNF680Q8NEM1 530 aa16■□□□□ 0.15
TRAF4-211ENST00000478021 OR11H4Q8NGC9 324 aa16■□□□□ 0.15
TRAF4-211ENST00000478021 SUN5Q8TC36 379 aa16■□□□□ 0.15
TRAF4-211ENST00000478021 VPS13DQ5THJ4 4388 aa16■□□□□ 0.15
TRAF4-211ENST00000478021 IGHV1OR15-1A0A075B7D0 117 aa15.99■□□□□ 0.15
TRAF4-211ENST00000478021 MUC21Q5SSG8 566 aa15.99■□□□□ 0.15
TRAF4-211ENST00000478021 AKR1C8PQ5T2L2 129 aa15.99■□□□□ 0.15
TRAF4-211ENST00000478021 Q6ZTI0 123 aa15.99■□□□□ 0.15
TRAF4-211ENST00000478021 UBE2DNLQ8IWF7 75 aa15.99■□□□□ 0.15
TRAF4-211ENST00000478021 ST6GAL2Q96JF0 529 aa15.99■□□□□ 0.15
TRAF4-211ENST00000478021 SGK494Q96LW2 274 aa15.99■□□□□ 0.15
TRAF4-211ENST00000478021 KLF12Q9Y4X4 402 aa15.99■□□□□ 0.15
TRAF4-211ENST00000478021 LENEPQ9Y5L5 61 aa15.99■□□□□ 0.15
TRAF4-211ENST00000478021 DAZ2Q13117 558 aaKnown RBP15.98■□□□□ 0.15
TRAF4-211ENST00000478021 POM121L12Q8N7R1 296 aa15.98■□□□□ 0.15
TRAF4-211ENST00000478021 ARPC5LQ9BPX5 153 aa15.98■□□□□ 0.15
TRAF4-211ENST00000478021 TMEM167BQ9NRX6 74 aa15.98■□□□□ 0.15
TRAF4-211ENST00000478021 CTXND1A0A1B0GTU2 59 aa15.97■□□□□ 0.15
TRAF4-211ENST00000478021 FGF8P55075 233 aaPredicted RBP15.97■□□□□ 0.15
TRAF4-211ENST00000478021 KCNRGQ8N5I3 272 aa15.97■□□□□ 0.15
TRAF4-211ENST00000478021 ARL6IP6Q8N6S5 226 aa15.97■□□□□ 0.15
TRAF4-211ENST00000478021 C15orf53Q8NAA6 179 aa15.97■□□□□ 0.15
TRAF4-211ENST00000478021 TMED6Q8WW62 240 aa15.97■□□□□ 0.15
TRAF4-211ENST00000478021 TMPRSS5Q9H3S3 457 aa15.97■□□□□ 0.15
TRAF4-211ENST00000478021 DNAH6Q9C0G6 4158 aa15.96■□□□□ 0.15
TRAF4-211ENST00000478021 TRGV1A0A0A0MS02 117 aa15.96■□□□□ 0.15
TRAF4-211ENST00000478021 GGTLC3B5MD39 225 aa15.96■□□□□ 0.15
TRAF4-211ENST00000478021 F6UZH7 168 aa15.96■□□□□ 0.15
TRAF4-211ENST00000478021 NUDT3O95989 172 aa15.96■□□□□ 0.15
TRAF4-211ENST00000478021 SUMO1P63165 101 aaKnown RBP15.96■□□□□ 0.15
TRAF4-211ENST00000478021 OR5I1Q13606 314 aa15.96■□□□□ 0.15
TRAF4-211ENST00000478021 Q6AWC8 147 aa15.96■□□□□ 0.15
TRAF4-211ENST00000478021 C5orf17Q8NAS9 161 aa15.96■□□□□ 0.15
TRAF4-211ENST00000478021 TVP23CQ96ET8 276 aa15.96■□□□□ 0.15
TRAF4-211ENST00000478021 TCRAP04437 139 aa15.95■□□□□ 0.14
TRAF4-211ENST00000478021 TCL1AP56279 114 aa15.95■□□□□ 0.14
TRAF4-211ENST00000478021 ZNF345Q14585 488 aa15.95■□□□□ 0.14
TRAF4-211ENST00000478021 HMSDA8MTL9 139 aa15.94■□□□□ 0.14
TRAF4-211ENST00000478021 HOXA5P20719 270 aa15.94■□□□□ 0.14
TRAF4-211ENST00000478021 IBA57Q5T440 356 aaKnown RBP15.94■□□□□ 0.14
TRAF4-211ENST00000478021 TREM1Q9NP99 234 aa15.94■□□□□ 0.14
TRAF4-211ENST00000478021 NAGKQ9UJ70 344 aa15.94■□□□□ 0.14
TRAF4-211ENST00000478021 TRGV2A0A075B6R0 118 aa15.93■□□□□ 0.14
TRAF4-211ENST00000478021 UBE2G2P60604 165 aa15.93■□□□□ 0.14
TRAF4-211ENST00000478021 MRPL16Q9NX20 251 aaKnown RBP15.93■□□□□ 0.14
TRAF4-211ENST00000478021 NACAE9PAV3 2078 aa15.92■□□□□ 0.14
TRAF4-211ENST00000478021 A0A0J9YY99 117 aa15.92■□□□□ 0.14
TRAF4-211ENST00000478021 SERTM2A0A1B0GWG4 89 aa15.92■□□□□ 0.14
TRAF4-211ENST00000478021 SPINK4O60575 86 aa15.92■□□□□ 0.14
TRAF4-211ENST00000478021 ZNF415Q09FC8 603 aa15.92■□□□□ 0.14
TRAF4-211ENST00000478021 EPDR1Q9UM22 224 aa15.92■□□□□ 0.14
TRAF4-211ENST00000478021 TRAV26-1A0A087WT03 109 aa15.91■□□□□ 0.14
TRAF4-211ENST00000478021 A0A0D9SG52 128 aa15.91■□□□□ 0.14
TRAF4-211ENST00000478021 MAP1LC3B2A6NCE7 125 aa15.91■□□□□ 0.14
TRAF4-211ENST00000478021 K7EQM0 130 aa15.91■□□□□ 0.14
TRAF4-211ENST00000478021 TMEM183BQ1AE95 376 aa15.91■□□□□ 0.14
TRAF4-211ENST00000478021 FAM159AQ6UWV7 190 aa15.91■□□□□ 0.14
TRAF4-211ENST00000478021 TMEM183AQ8IXX5 376 aa15.91■□□□□ 0.14
TRAF4-211ENST00000478021 C8orf49Q96NF6 230 aa15.91■□□□□ 0.14
TRAF4-211ENST00000478021 ZNF471Q9BX82 626 aaPredicted RBP15.91■□□□□ 0.14
TRAF4-211ENST00000478021 MAP1LC3BQ9GZQ8 125 aa15.91■□□□□ 0.14
TRAF4-211ENST00000478021 MDFICQ9P1T7 246 aa15.91■□□□□ 0.14
TRAF4-211ENST00000478021 KANTRA0A1W2PQU2 76 aa15.9■□□□□ 0.14
TRAF4-211ENST00000478021 A0A1W2PRE2 83 aa15.9■□□□□ 0.14
TRAF4-211ENST00000478021 M0R2N4 97 aa15.9■□□□□ 0.14
TRAF4-211ENST00000478021 BCL2L11O43521 198 aa15.9■□□□□ 0.14
TRAF4-211ENST00000478021 FHITP49789 147 aa15.9■□□□□ 0.14
TRAF4-211ENST00000478021 ATG101Q9BSB4 218 aa15.9■□□□□ 0.14
TRAF4-211ENST00000478021 NDFIP1Q9BT67 221 aa15.9■□□□□ 0.14
TRAF4-211ENST00000478021 PSG8Q9UQ74 426 aa15.9■□□□□ 0.14
TRAF4-211ENST00000478021 IGLV2-18A0A075B6J9 118 aa15.89■□□□□ 0.13
TRAF4-211ENST00000478021 TRAV21A0A0B4J279 112 aa15.89■□□□□ 0.13
TRAF4-211ENST00000478021 RNF212Q495C1 297 aa15.89■□□□□ 0.13
TRAF4-211ENST00000478021 CYB561D1Q8N8Q1 229 aa15.89■□□□□ 0.13
TRAF4-211ENST00000478021 TRGV11A0A075B6L2 103 aa15.88■□□□□ 0.13
TRAF4-211ENST00000478021 IFNA7P01567 189 aa15.88■□□□□ 0.13
TRAF4-211ENST00000478021 IGLV2-11P01706 119 aa15.88■□□□□ 0.13
TRAF4-211ENST00000478021 FLI1Q01543 452 aaPredicted RBP15.88■□□□□ 0.13
TRAF4-211ENST00000478021 PRNTQ86SH4 94 aa15.88■□□□□ 0.13
TRAF4-211ENST00000478021 FRAS1Q86XX4 4008 aa15.87■□□□□ 0.13
TRAF4-211ENST00000478021 GNRH2O43555 120 aa15.87■□□□□ 0.13
TRAF4-211ENST00000478021 IGHV3-53P01767 116 aa15.87■□□□□ 0.13
TRAF4-211ENST00000478021 ZNF80P51504 273 aaPredicted RBP15.87■□□□□ 0.13
TRAF4-211ENST00000478021 TMUB2Q71RG4 321 aa15.87■□□□□ 0.13
TRAF4-211ENST00000478021 TMEM75Q8N9X5 138 aa15.87■□□□□ 0.13
TRAF4-211ENST00000478021 LINC00479Q96M42 142 aa15.87■□□□□ 0.13
TRAF4-211ENST00000478021 C18orf15Q96N68 181 aa15.87■□□□□ 0.13
TRAF4-211ENST00000478021 TRAV34A0A0B4J273 112 aa15.86■□□□□ 0.13
TRAF4-211ENST00000478021 FAM74A7A6NL05 159 aa15.86■□□□□ 0.13
TRAF4-211ENST00000478021 PFDN1O60925 122 aa15.86■□□□□ 0.13
TRAF4-211ENST00000478021 SEC11BP0C7V7 166 aa15.86■□□□□ 0.13
TRAF4-211ENST00000478021 LGALS9BQ3B8N2 356 aa15.85■□□□□ 0.13
TRAF4-211ENST00000478021 TDRG1Q3Y452 100 aa15.85■□□□□ 0.13
TRAF4-211ENST00000478021 FAM213BQ8TBF2 198 aa15.85■□□□□ 0.13
TRAF4-211ENST00000478021 A0A1B0GV50 99 aa15.84■□□□□ 0.13
TRAF4-211ENST00000478021 PEX7O00628 323 aa15.84■□□□□ 0.13
TRAF4-211ENST00000478021 GCGP01275 180 aa15.84■□□□□ 0.13
TRAF4-211ENST00000478021 TYMSP04818 313 aa15.84■□□□□ 0.13
TRAF4-211ENST00000478021 Q6ZNX1 250 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms