RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 ARV1Q9H2C2 271 aa4.63□□□□□ -1.67
SPTLC1-205ENST00000477888 PAIP2BQ9ULR5 123 aaKnown RBP4.63□□□□□ -1.67
SPTLC1-205ENST00000477888 RNF24Q9Y225 148 aa4.63□□□□□ -1.67
SPTLC1-205ENST00000477888 A0A0B4J2A0 478 aa4.62□□□□□ -1.67
SPTLC1-205ENST00000477888 IGHV3-16A0A0C4DH30 117 aa4.62□□□□□ -1.67
SPTLC1-205ENST00000477888 FABP12A6NFH5 140 aa4.62□□□□□ -1.67
SPTLC1-205ENST00000477888 IAPPP10997 89 aa4.62□□□□□ -1.67
SPTLC1-205ENST00000477888 AKR1C4P17516 323 aa4.62□□□□□ -1.67
SPTLC1-205ENST00000477888 TBPP20226 339 aa4.62□□□□□ -1.67
SPTLC1-205ENST00000477888 SELENOTP62341 195 aa4.62□□□□□ -1.67
SPTLC1-205ENST00000477888 VWC2Q2TAL6 325 aa4.62□□□□□ -1.67
SPTLC1-205ENST00000477888 SCGB2B2Q4G0G5 96 aa4.62□□□□□ -1.67
SPTLC1-205ENST00000477888 C14orf177Q52M58 125 aa4.62□□□□□ -1.67
SPTLC1-205ENST00000477888 ATRAIDQ6UW56 229 aa4.62□□□□□ -1.67
SPTLC1-205ENST00000477888 LINC00305Q7Z4B0 112 aa4.62□□□□□ -1.67
SPTLC1-205ENST00000477888 BPIFA4PQ86YQ2 179 aa4.62□□□□□ -1.67
SPTLC1-205ENST00000477888 CROCCP3Q8IVE0 287 aa4.62□□□□□ -1.67
SPTLC1-205ENST00000477888 ARL6Q9H0F7 186 aa4.62□□□□□ -1.67
SPTLC1-205ENST00000477888 VCXQ9H320 206 aa4.62□□□□□ -1.67
SPTLC1-205ENST00000477888 SHPKQ9UHJ6 478 aa4.62□□□□□ -1.67
SPTLC1-205ENST00000477888 LOC100506127A0A0U1RQW1 187 aa4.61□□□□□ -1.67
SPTLC1-205ENST00000477888 SMIM31A0A1B0GVY4 71 aa4.61□□□□□ -1.67
SPTLC1-205ENST00000477888 M0R3E3 92 aa4.61□□□□□ -1.67
SPTLC1-205ENST00000477888 AQP4P55087 323 aa4.61□□□□□ -1.67
SPTLC1-205ENST00000477888 SURF2Q15527 256 aaPredicted RBP4.61□□□□□ -1.67
SPTLC1-205ENST00000477888 DPPA3Q6W0C5 159 aa4.61□□□□□ -1.67
SPTLC1-205ENST00000477888 MRPL53Q96EL3 112 aaKnown RBP4.61□□□□□ -1.67
SPTLC1-205ENST00000477888 GPR132Q9UNW8 380 aa4.61□□□□□ -1.67
SPTLC1-205ENST00000477888 C14orf166Q9Y224 244 aaKnown RBP4.61□□□□□ -1.67
SPTLC1-205ENST00000477888 TRBV6-4A0A1B0GX49 114 aa4.6□□□□□ -1.67
SPTLC1-205ENST00000477888 K7EPK0 472 aa4.6□□□□□ -1.67
SPTLC1-205ENST00000477888 PHOX2AO14813 284 aa4.6□□□□□ -1.67
SPTLC1-205ENST00000477888 ZNF253O75346 499 aa4.6□□□□□ -1.67
SPTLC1-205ENST00000477888 APOA1P02647 267 aa4.6□□□□□ -1.67
SPTLC1-205ENST00000477888 PRSS1P07477 247 aa4.6□□□□□ -1.67
SPTLC1-205ENST00000477888 VPREB1P12018 145 aa4.6□□□□□ -1.67
SPTLC1-205ENST00000477888 TGFBR1P36897 503 aa4.6□□□□□ -1.67
SPTLC1-205ENST00000477888 GUK1Q16774 197 aa4.6□□□□□ -1.67
SPTLC1-205ENST00000477888 MUC21Q5SSG8 566 aa4.6□□□□□ -1.67
SPTLC1-205ENST00000477888 PXDC1Q5TGL8 231 aa4.6□□□□□ -1.67
SPTLC1-205ENST00000477888 ZC2HC1AQ96GY0 325 aa4.6□□□□□ -1.67
SPTLC1-205ENST00000477888 PRADC1Q9BSG0 188 aa4.6□□□□□ -1.67
SPTLC1-205ENST00000477888 MTFP1Q9UDX5 166 aa4.6□□□□□ -1.67
SPTLC1-205ENST00000477888 KIF25-AS1Q9Y6Z4 181 aa4.6□□□□□ -1.67
SPTLC1-205ENST00000477888 A0A087WYN8 130 aa4.59□□□□□ -1.67
SPTLC1-205ENST00000477888 ANKRD65E5RJM6 399 aa4.59□□□□□ -1.67
SPTLC1-205ENST00000477888 M0R2P5 195 aa4.59□□□□□ -1.67
SPTLC1-205ENST00000477888 RAB3DO95716 219 aa4.59□□□□□ -1.67
SPTLC1-205ENST00000477888 UBE2MP61081 183 aaKnown RBP4.59□□□□□ -1.67
SPTLC1-205ENST00000477888 RHOHQ15669 191 aa4.59□□□□□ -1.67
SPTLC1-205ENST00000477888 SPANXN5Q5MJ07 72 aa4.59□□□□□ -1.67
SPTLC1-205ENST00000477888 REG3GQ6UW15 175 aa4.59□□□□□ -1.67
SPTLC1-205ENST00000477888 SPINK6Q6UWN8 80 aa4.59□□□□□ -1.67
SPTLC1-205ENST00000477888 NIT1Q86X76 327 aa4.59□□□□□ -1.67
SPTLC1-205ENST00000477888 TMEM229BQ8NBD8 167 aa4.59□□□□□ -1.67
SPTLC1-205ENST00000477888 OR51S1Q8NGJ8 323 aa4.59□□□□□ -1.67
SPTLC1-205ENST00000477888 OR52I2Q8NH67 350 aa4.59□□□□□ -1.67
SPTLC1-205ENST00000477888 C2orf50Q96LR7 162 aa4.59□□□□□ -1.67
SPTLC1-205ENST00000477888 CIB3Q96Q77 187 aaPredicted RBP4.59□□□□□ -1.67
SPTLC1-205ENST00000477888 SRRQ9GZT4 340 aa4.59□□□□□ -1.67
SPTLC1-205ENST00000477888 ZNF492Q9P255 531 aa4.59□□□□□ -1.67
SPTLC1-205ENST00000477888 KLK12Q9UKR0 248 aa4.59□□□□□ -1.67
SPTLC1-205ENST00000477888 RABL2BQ9UNT1 228 aa4.59□□□□□ -1.67
SPTLC1-205ENST00000477888 KCNIP3Q9Y2W7 256 aa4.59□□□□□ -1.67
SPTLC1-205ENST00000477888 A0A0A0MQY5 61 aa4.58□□□□□ -1.68
SPTLC1-205ENST00000477888 TRBV7-9A0A0J9YWB2 115 aa4.58□□□□□ -1.68
SPTLC1-205ENST00000477888 SMCO3A2RU48 225 aa4.58□□□□□ -1.68
SPTLC1-205ENST00000477888 FBLL1A6NHQ2 334 aaKnown RBP4.58□□□□□ -1.68
SPTLC1-205ENST00000477888 WRBO00258 174 aa4.58□□□□□ -1.68
SPTLC1-205ENST00000477888 SYNGR2O43760 224 aa4.58□□□□□ -1.68
SPTLC1-205ENST00000477888 MED6O75586 246 aa4.58□□□□□ -1.68
SPTLC1-205ENST00000477888 NDUFB4O95168 129 aa4.58□□□□□ -1.68
SPTLC1-205ENST00000477888 OR10J4P0C629 311 aa4.58□□□□□ -1.68
SPTLC1-205ENST00000477888 GABARAPL2P60520 117 aa4.58□□□□□ -1.68
SPTLC1-205ENST00000477888 POLR2GP62487 172 aaKnown RBP eCLIP4.58□□□□□ -1.68
SPTLC1-205ENST00000477888 TMEM183BQ1AE95 376 aa4.58□□□□□ -1.68
SPTLC1-205ENST00000477888 FAAP20Q6NZ36 180 aa4.58□□□□□ -1.68
SPTLC1-205ENST00000477888 TMEM183AQ8IXX5 376 aa4.58□□□□□ -1.68
SPTLC1-205ENST00000477888 UBE2WQ96B02 151 aa4.58□□□□□ -1.68
SPTLC1-205ENST00000477888 RNF185Q96GF1 192 aa4.58□□□□□ -1.68
SPTLC1-205ENST00000477888 SH3BGRL3Q9H299 93 aa4.58□□□□□ -1.68
SPTLC1-205ENST00000477888 COMMD3Q9UBI1 195 aa4.58□□□□□ -1.68
SPTLC1-205ENST00000477888 TRBV19A0A075B6N1 114 aa4.57□□□□□ -1.68
SPTLC1-205ENST00000477888 H0YIZ8 118 aa4.57□□□□□ -1.68
SPTLC1-205ENST00000477888 H3BP45 60 aa4.57□□□□□ -1.68
SPTLC1-205ENST00000477888 NOL3O60936 208 aaKnown RBP4.57□□□□□ -1.68
SPTLC1-205ENST00000477888 SEC11BP0C7V7 166 aa4.57□□□□□ -1.68
SPTLC1-205ENST00000477888 LINC00694P0DN24 101 aa4.57□□□□□ -1.68
SPTLC1-205ENST00000477888 SLC25A6P12236 298 aa4.57□□□□□ -1.68
SPTLC1-205ENST00000477888 TAS2R19P59542 299 aa4.57□□□□□ -1.68
SPTLC1-205ENST00000477888 PRR3P79522 188 aaKnown RBP4.57□□□□□ -1.68
SPTLC1-205ENST00000477888 RPL19P84098 196 aaKnown RBP4.57□□□□□ -1.68
SPTLC1-205ENST00000477888 SLC38A11Q08AI6 406 aa4.57□□□□□ -1.68
SPTLC1-205ENST00000477888 SRSF9Q13242 221 aaKnown RBP eCLIP4.57□□□□□ -1.68
SPTLC1-205ENST00000477888 TMEM78Q5T7P6 136 aa4.57□□□□□ -1.68
SPTLC1-205ENST00000477888 CFAP126Q5VTH2 177 aa4.57□□□□□ -1.68
SPTLC1-205ENST00000477888 ZNF546Q86UE3 836 aa4.57□□□□□ -1.68
SPTLC1-205ENST00000477888 OR10G9Q8NGN4 311 aa4.57□□□□□ -1.68
SPTLC1-205ENST00000477888 YIPF6Q96EC8 236 aa4.57□□□□□ -1.68
SPTLC1-205ENST00000477888 DPH3Q96FX2 82 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms