RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 CCR6P51684 374 aa3.07□□□□□ -1.92
CKS1B-207ENST00000477676 TAS2R19P59542 299 aa3.07□□□□□ -1.92
CKS1B-207ENST00000477676 HIST1H1AQ02539 215 aaPredicted RBP3.07□□□□□ -1.92
CKS1B-207ENST00000477676 FGL1Q08830 312 aa3.07□□□□□ -1.92
CKS1B-207ENST00000477676 GAGE5Q13069 117 aa3.07□□□□□ -1.92
CKS1B-207ENST00000477676 GAGE6Q13070 117 aa3.07□□□□□ -1.92
CKS1B-207ENST00000477676 SMCO1Q147U7 214 aa3.07□□□□□ -1.92
CKS1B-207ENST00000477676 PSG3Q16557 428 aa3.07□□□□□ -1.92
CKS1B-207ENST00000477676 CD164L2Q6UWJ8 174 aa3.07□□□□□ -1.92
CKS1B-207ENST00000477676 Q6ZQT7 251 aa3.07□□□□□ -1.92
CKS1B-207ENST00000477676 TMEM144Q7Z5S9 345 aa3.07□□□□□ -1.92
CKS1B-207ENST00000477676 TMEM256Q8N2U0 113 aa3.07□□□□□ -1.92
CKS1B-207ENST00000477676 ZNF738Q8NE65 137 aa3.07□□□□□ -1.92
CKS1B-207ENST00000477676 OR51S1Q8NGJ8 323 aa3.07□□□□□ -1.92
CKS1B-207ENST00000477676 OR4D5Q8NGN0 318 aa3.07□□□□□ -1.92
CKS1B-207ENST00000477676 TMEM263Q8WUH6 116 aaKnown RBP3.07□□□□□ -1.92
CKS1B-207ENST00000477676 FRZBQ92765 325 aa3.07□□□□□ -1.92
CKS1B-207ENST00000477676 C16orf74Q96GX8 76 aa3.07□□□□□ -1.92
CKS1B-207ENST00000477676 SHANK2-AS3Q9BTD1 123 aa3.07□□□□□ -1.92
CKS1B-207ENST00000477676 SHPKQ9UHJ6 478 aa3.07□□□□□ -1.92
CKS1B-207ENST00000477676 A0A087X0K7 114 aa3.06□□□□□ -1.92
CKS1B-207ENST00000477676 LRCOL1A6NCL2 159 aa3.06□□□□□ -1.92
CKS1B-207ENST00000477676 PMS2P5A8MQ11 134 aa3.06□□□□□ -1.92
CKS1B-207ENST00000477676 H3BNG1 76 aa3.06□□□□□ -1.92
CKS1B-207ENST00000477676 H3BTX0 84 aa3.06□□□□□ -1.92
CKS1B-207ENST00000477676 GABARAPH6UMI1 98 aa3.06□□□□□ -1.92
CKS1B-207ENST00000477676 H7BYZ3 331 aa3.06□□□□□ -1.92
CKS1B-207ENST00000477676 SLC17A3O00476 420 aa3.06□□□□□ -1.92
CKS1B-207ENST00000477676 SIVA1O15304 175 aa3.06□□□□□ -1.92
CKS1B-207ENST00000477676 PRAF2O60831 178 aa3.06□□□□□ -1.92
CKS1B-207ENST00000477676 NXPH4O95158 308 aa3.06□□□□□ -1.92
CKS1B-207ENST00000477676 GABARAPO95166 117 aa3.06□□□□□ -1.92
CKS1B-207ENST00000477676 SNAPINO95295 136 aa3.06□□□□□ -1.92
CKS1B-207ENST00000477676 TNFAIP8O95379 198 aa3.06□□□□□ -1.92
CKS1B-207ENST00000477676 SMIM18P0DKX4 95 aa3.06□□□□□ -1.92
CKS1B-207ENST00000477676 CT45A10P0DMU9 189 aa3.06□□□□□ -1.92
CKS1B-207ENST00000477676 KRTAP10-4P60372 401 aaPredicted RBP3.06□□□□□ -1.92
CKS1B-207ENST00000477676 RHOBP62745 196 aa3.06□□□□□ -1.92
CKS1B-207ENST00000477676 SURF2Q15527 256 aaPredicted RBP3.06□□□□□ -1.92
CKS1B-207ENST00000477676 LBHQ53QV2 105 aaPredicted RBP3.06□□□□□ -1.92
CKS1B-207ENST00000477676 SAMD13Q5VXD3 122 aa3.06□□□□□ -1.92
CKS1B-207ENST00000477676 ZNF493Q6ZR52 646 aa3.06□□□□□ -1.92
CKS1B-207ENST00000477676 ACOT7LQ6ZUV0 252 aa3.06□□□□□ -1.92
CKS1B-207ENST00000477676 TMED4Q7Z7H5 227 aa3.06□□□□□ -1.92
CKS1B-207ENST00000477676 SMIM29Q86T20 159 aa3.06□□□□□ -1.92
CKS1B-207ENST00000477676 C11orf72Q8NBR9 251 aa3.06□□□□□ -1.92
CKS1B-207ENST00000477676 OR1B1Q8NGR6 318 aa3.06□□□□□ -1.92
CKS1B-207ENST00000477676 SMIM4Q8WVI0 70 aa3.06□□□□□ -1.92
CKS1B-207ENST00000477676 RPUSD4Q96CM3 377 aaKnown RBP3.06□□□□□ -1.92
CKS1B-207ENST00000477676 C14orf166Q9Y224 244 aaKnown RBP3.06□□□□□ -1.92
CKS1B-207ENST00000477676 LPAP08519 4548 aa3.06□□□□□ -1.92
CKS1B-207ENST00000477676 TRAV12-3A0A0B4J271 114 aa3.05□□□□□ -1.92
CKS1B-207ENST00000477676 ANKRD20A5PA0PJZ0 165 aa3.05□□□□□ -1.92
CKS1B-207ENST00000477676 H3BP45 60 aa3.05□□□□□ -1.92
CKS1B-207ENST00000477676 H3BQ15 152 aa3.05□□□□□ -1.92
CKS1B-207ENST00000477676 ZNF324O75467 553 aaPredicted RBP3.05□□□□□ -1.92
CKS1B-207ENST00000477676 MBP02144 154 aa3.05□□□□□ -1.92
CKS1B-207ENST00000477676 AKAIN1P0CW23 69 aa3.05□□□□□ -1.92
CKS1B-207ENST00000477676 AKR1C4P17516 323 aa3.05□□□□□ -1.92
CKS1B-207ENST00000477676 PLP1P60201 277 aa3.05□□□□□ -1.92
CKS1B-207ENST00000477676 DAZ2Q13117 558 aaKnown RBP3.05□□□□□ -1.92
CKS1B-207ENST00000477676 VAMP3Q15836 100 aa3.05□□□□□ -1.92
CKS1B-207ENST00000477676 CYP2G1PQ6ZSU1 146 aa3.05□□□□□ -1.92
CKS1B-207ENST00000477676 WFDC10BQ8IUB3 73 aa3.05□□□□□ -1.92
CKS1B-207ENST00000477676 CLVS1Q8IUQ0 354 aaPredicted RBP3.05□□□□□ -1.92
CKS1B-207ENST00000477676 OR10J6PQ8NGY7 276 aa3.05□□□□□ -1.92
CKS1B-207ENST00000477676 OR1S1Q8NH92 325 aa3.05□□□□□ -1.92
CKS1B-207ENST00000477676 ZNF431Q8TF32 576 aaPredicted RBP3.05□□□□□ -1.92
CKS1B-207ENST00000477676 GPR82Q96P67 336 aa3.05□□□□□ -1.92
CKS1B-207ENST00000477676 SOSTQ9BQB4 213 aa3.05□□□□□ -1.92
CKS1B-207ENST00000477676 TMEM147Q9BVK8 224 aa3.05□□□□□ -1.92
CKS1B-207ENST00000477676 ZNF331Q9NQX6 463 aaPredicted RBP3.05□□□□□ -1.92
CKS1B-207ENST00000477676 HIGD1AQ9Y241 93 aa3.05□□□□□ -1.92
CKS1B-207ENST00000477676 WDR83OSQ9Y284 106 aa3.05□□□□□ -1.92
CKS1B-207ENST00000477676 KLF12Q9Y4X4 402 aa3.05□□□□□ -1.92
CKS1B-207ENST00000477676 A0A087WXM4 84 aa3.04□□□□□ -1.92
CKS1B-207ENST00000477676 A0A1W2PPV4 95 aa3.04□□□□□ -1.92
CKS1B-207ENST00000477676 DISC1C4P0D8 188 aa3.04□□□□□ -1.92
CKS1B-207ENST00000477676 SYNGR2O43760 224 aa3.04□□□□□ -1.92
CKS1B-207ENST00000477676 HYPMO75409 117 aa3.04□□□□□ -1.92
CKS1B-207ENST00000477676 CFDP00746 253 aaPredicted RBP3.04□□□□□ -1.92
CKS1B-207ENST00000477676 IGHV3-53P01767 116 aa3.04□□□□□ -1.92
CKS1B-207ENST00000477676 RLN2P04090 185 aa3.04□□□□□ -1.92
CKS1B-207ENST00000477676 FABP1P07148 127 aa3.04□□□□□ -1.92
CKS1B-207ENST00000477676 LINC00869P0C866 280 aa3.04□□□□□ -1.92
CKS1B-207ENST00000477676 RPL7P18124 248 aaKnown RBP3.04□□□□□ -1.92
CKS1B-207ENST00000477676 RAB11AP62491 216 aa3.04□□□□□ -1.92
CKS1B-207ENST00000477676 SSBP1Q04837 148 aaKnown RBP3.04□□□□□ -1.92
CKS1B-207ENST00000477676 CD300CQ08708 224 aa3.04□□□□□ -1.92
CKS1B-207ENST00000477676 SLAQ13239 276 aa3.04□□□□□ -1.92
CKS1B-207ENST00000477676 WFDC2Q14508 124 aa3.04□□□□□ -1.92
CKS1B-207ENST00000477676 OPCMLQ14982 345 aa3.04□□□□□ -1.92
CKS1B-207ENST00000477676 SPANXN5Q5MJ07 72 aa3.04□□□□□ -1.92
CKS1B-207ENST00000477676 PRR9Q5T870 116 aa3.04□□□□□ -1.92
CKS1B-207ENST00000477676 LYPD5Q6UWN5 251 aa3.04□□□□□ -1.92
CKS1B-207ENST00000477676 LRTM2Q8N967 370 aa3.04□□□□□ -1.92
CKS1B-207ENST00000477676 TMEM37Q8WXS4 190 aa3.04□□□□□ -1.92
CKS1B-207ENST00000477676 PRRT1Q99946 306 aa3.04□□□□□ -1.92
CKS1B-207ENST00000477676 C20orf144Q9BQM9 153 aa3.04□□□□□ -1.92
CKS1B-207ENST00000477676 ALKBH7Q9BT30 221 aaPredicted RBP3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms