RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 KNCNA6PVL3 124 aa21.43■■□□□ 1.02
VEGFA-211ENST00000476772 PRR9Q5T870 116 aa21.43■■□□□ 1.02
VEGFA-211ENST00000476772 J3KRW8 73 aa21.42■■□□□ 1.02
VEGFA-211ENST00000476772 ODF3L2Q3SX64 289 aa21.42■■□□□ 1.02
VEGFA-211ENST00000476772 OR4B1Q8NGF8 309 aa21.42■■□□□ 1.02
VEGFA-211ENST00000476772 A0A1W2PPQ1 181 aa21.41■■□□□ 1.02
VEGFA-211ENST00000476772 DUSP14O95147 198 aaKnown RBP21.41■■□□□ 1.02
VEGFA-211ENST00000476772 IGKV3-20P01619 116 aa21.41■■□□□ 1.02
VEGFA-211ENST00000476772 RPL19P84098 196 aaKnown RBP21.41■■□□□ 1.02
VEGFA-211ENST00000476772 OR2D3Q8NGH3 330 aa21.41■■□□□ 1.02
VEGFA-211ENST00000476772 TRBV7-9A0A0J9YWB2 115 aa21.4■■□□□ 1.02
VEGFA-211ENST00000476772 TCL1AP56279 114 aa21.4■■□□□ 1.02
VEGFA-211ENST00000476772 CT83Q5H943 113 aa21.4■■□□□ 1.02
VEGFA-211ENST00000476772 ACTL10Q5JWF8 245 aa21.4■■□□□ 1.02
VEGFA-211ENST00000476772 APRG1Q8IVJ8 170 aa21.4■■□□□ 1.02
VEGFA-211ENST00000476772 FABP5P3A8MUU1 101 aa21.4■■□□□ 1.02
VEGFA-211ENST00000476772 CRISP2P16562 243 aa21.4■■□□□ 1.02
VEGFA-211ENST00000476772 C9orf66Q5T8R8 295 aa21.4■■□□□ 1.02
VEGFA-211ENST00000476772 SHISA2Q6UWI4 295 aa21.4■■□□□ 1.02
VEGFA-211ENST00000476772 SMIM27A0A1W2PRY6 76 aa21.39■■□□□ 1.01
VEGFA-211ENST00000476772 TSKUQ8WUA8 353 aa21.39■■□□□ 1.01
VEGFA-211ENST00000476772 AGRNO00468 2067 aa21.39■■□□□ 1.01
VEGFA-211ENST00000476772 TRBV24-1A0A075B6N3 115 aa21.38■■□□□ 1.01
VEGFA-211ENST00000476772 HLA-DRB4P13762 266 aa21.38■■□□□ 1.01
VEGFA-211ENST00000476772 KIR3DS1Q14943 382 aa21.38■■□□□ 1.01
VEGFA-211ENST00000476772 ODF3Q96PU9 254 aa21.38■■□□□ 1.01
VEGFA-211ENST00000476772 PYGO2Q9BRQ0 406 aa21.38■■□□□ 1.01
VEGFA-211ENST00000476772 HLA-DRB4X5D2U9 266 aa21.38■■□□□ 1.01
VEGFA-211ENST00000476772 INSL3P51460 131 aa21.37■■□□□ 1.01
VEGFA-211ENST00000476772 BEAN1Q3B7T3 259 aa21.37■■□□□ 1.01
VEGFA-211ENST00000476772 A8MWL6 223 aa21.37■■□□□ 1.01
VEGFA-211ENST00000476772 GPX1P07203 203 aa21.37■■□□□ 1.01
VEGFA-211ENST00000476772 Q6ZQT7 251 aa21.37■■□□□ 1.01
VEGFA-211ENST00000476772 FAM210BQ96KR6 192 aa21.37■■□□□ 1.01
VEGFA-211ENST00000476772 OR11H12B2RN74 326 aa21.36■■□□□ 1.01
VEGFA-211ENST00000476772 H3BMM0 161 aa21.36■■□□□ 1.01
VEGFA-211ENST00000476772 GZMBP10144 247 aa21.36■■□□□ 1.01
VEGFA-211ENST00000476772 NEU1Q99519 415 aa21.36■■□□□ 1.01
VEGFA-211ENST00000476772 TMEM189A5PLL7 270 aa21.35■■□□□ 1.01
VEGFA-211ENST00000476772 RAB5AP20339 215 aa21.35■■□□□ 1.01
VEGFA-211ENST00000476772 AMTNQ6UX39 209 aa21.35■■□□□ 1.01
VEGFA-211ENST00000476772 WFDC9Q8NEX5 89 aa21.35■■□□□ 1.01
VEGFA-211ENST00000476772 TMSB15BA0A087X1C1 80 aa21.34■■□□□ 1.01
VEGFA-211ENST00000476772 KLLNB2CW77 178 aa21.34■■□□□ 1.01
VEGFA-211ENST00000476772 CD7P09564 240 aa21.34■■□□□ 1.01
VEGFA-211ENST00000476772 RNASE4P34096 147 aaKnown RBP21.34■■□□□ 1.01
VEGFA-211ENST00000476772 LEPP41159 167 aa21.34■■□□□ 1.01
VEGFA-211ENST00000476772 VWFP04275 2813 aa21.34■■□□□ 1.01
VEGFA-211ENST00000476772 A8MTW9 85 aa21.34■■□□□ 1.01
VEGFA-211ENST00000476772 GTSF1Q8WW33 167 aa21.34■■□□□ 1.01
VEGFA-211ENST00000476772 C11orf21Q9P2W6 132 aa21.34■■□□□ 1.01
VEGFA-211ENST00000476772 ORM1P02763 201 aa21.33■■□□□ 1
VEGFA-211ENST00000476772 MCRIP2Q9BUT9 160 aaKnown RBP21.33■■□□□ 1
VEGFA-211ENST00000476772 TRAV9-1A0A075B6T8 112 aa21.32■■□□□ 1
VEGFA-211ENST00000476772 HIGD1CA8MV81 97 aa21.32■■□□□ 1
VEGFA-211ENST00000476772 M0R2Z0 102 aa21.32■■□□□ 1
VEGFA-211ENST00000476772 NUP35Q8NFH5 326 aa21.32■■□□□ 1
VEGFA-211ENST00000476772 NAT8BQ9UHF3 227 aa21.32■■□□□ 1
VEGFA-211ENST00000476772 RBMY1BA6NDE4 496 aaKnown RBP21.31■■□□□ 1
VEGFA-211ENST00000476772 RBMY1EA6NEQ0 496 aaKnown RBP21.31■■□□□ 1
VEGFA-211ENST00000476772 RBMY1DP0C7P1 496 aaKnown RBP21.31■■□□□ 1
VEGFA-211ENST00000476772 CMC4P56277 68 aaPredicted RBP21.31■■□□□ 1
VEGFA-211ENST00000476772 SPINK13Q1W4C9 94 aa21.31■■□□□ 1
VEGFA-211ENST00000476772 LINC01559Q495D7 138 aa21.31■■□□□ 1
VEGFA-211ENST00000476772 Q6AWC8 147 aa21.31■■□□□ 1
VEGFA-211ENST00000476772 BTF3L4Q96K17 158 aa21.31■■□□□ 1
VEGFA-211ENST00000476772 GFRA4Q9GZZ7 299 aa21.31■■□□□ 1
VEGFA-211ENST00000476772 TRAV21A0A0B4J279 112 aa21.31■■□□□ 1
VEGFA-211ENST00000476772 SPINK4O60575 86 aa21.31■■□□□ 1
VEGFA-211ENST00000476772 IGKV3D-20A0A0C4DH25 116 aa21.3■■□□□ 1
VEGFA-211ENST00000476772 IGLL1P15814 213 aa21.3■■□□□ 1
VEGFA-211ENST00000476772 CDKN1BP46527 198 aa21.3■■□□□ 1
VEGFA-211ENST00000476772 FAM110AQ9BQ89 295 aa21.3■■□□□ 1
VEGFA-211ENST00000476772 C19orf73Q9NVV2 129 aa21.3■■□□□ 1
VEGFA-211ENST00000476772 TSPOP30536 169 aa21.29■■□□□ 1
VEGFA-211ENST00000476772 ZNF575Q86XF7 245 aa21.29■■□□□ 1
VEGFA-211ENST00000476772 TRRAPQ9Y4A5 3859 aa21.29■■□□□ 1
VEGFA-211ENST00000476772 TRAV12-2A0A075B6T6 113 aa21.28■■□□□ 1
VEGFA-211ENST00000476772 FAM231BA6NCW3 169 aa21.28■■□□□ 1
VEGFA-211ENST00000476772 RPS10P46783 165 aaKnown RBP21.28■■□□□ 1
VEGFA-211ENST00000476772 FXYD7P58549 80 aa21.28■■□□□ 1
VEGFA-211ENST00000476772 GFI1BQ5VTD9 330 aa21.28■■□□□ 1
VEGFA-211ENST00000476772 WFDC10AQ9H1F0 79 aa21.28■■□□□ 1
VEGFA-211ENST00000476772 XKRY2A2RUG3 117 aa21.28■■□□□ 1
VEGFA-211ENST00000476772 C7orf71A4D174 169 aa21.28■■□□□ 1
VEGFA-211ENST00000476772 TYMSP04818 313 aa21.28■■□□□ 1
VEGFA-211ENST00000476772 RPS20P60866 119 aaKnown RBP21.28■■□□□ 1
VEGFA-211ENST00000476772 PGLYRP4Q96LB8 373 aa21.28■■□□□ 1
VEGFA-211ENST00000476772 TMA7Q9Y2S6 64 aaKnown RBP21.28■■□□□ 1
VEGFA-211ENST00000476772 STHQ8IWL8 128 aa21.27■■□□□ 1
VEGFA-211ENST00000476772 NAGKQ9UJ70 344 aa21.27■■□□□ 1
VEGFA-211ENST00000476772 MRPL54Q6P161 138 aaKnown RBP21.26■□□□□ 0.99
VEGFA-211ENST00000476772 TRAV12-3A0A0B4J271 114 aa21.25■□□□□ 0.99
VEGFA-211ENST00000476772 GRIFINA4D1Z8 144 aa21.25■□□□□ 0.99
VEGFA-211ENST00000476772 FOXA3P55318 350 aaPredicted RBP21.25■□□□□ 0.99
VEGFA-211ENST00000476772 SRD5A3Q9H8P0 318 aa21.25■□□□□ 0.99
VEGFA-211ENST00000476772 FRMD6-AS1P0C7T7 363 aa21.24■□□□□ 0.99
VEGFA-211ENST00000476772 CLUHP3Q96NS8 147 aa21.24■□□□□ 0.99
VEGFA-211ENST00000476772 STAB1Q9NY15 2570 aa21.24■□□□□ 0.99
VEGFA-211ENST00000476772 MUC21Q5SSG8 566 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms