RNA–Protein interactions for RNA: ENST00000475993.1

ABCF1-205, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 1 (best)

Gene ABCF1, Length 2,860 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-205ENST00000475993 DEFB127Q9H1M4 99 aa8.23□□□□□ -1.09
ABCF1-205ENST00000475993 DUSP14O95147 198 aaKnown RBP8.23□□□□□ -1.09
ABCF1-205ENST00000475993 TCL1BO95988 128 aa8.23□□□□□ -1.09
ABCF1-205ENST00000475993 EGR2P11161 476 aaPredicted RBP8.23□□□□□ -1.09
ABCF1-205ENST00000475993 VMA21Q3ZAQ7 101 aa8.23□□□□□ -1.09
ABCF1-205ENST00000475993 Q8N8P6 123 aa8.23□□□□□ -1.09
ABCF1-205ENST00000475993 CNFNQ9BYD5 112 aa8.23□□□□□ -1.09
ABCF1-205ENST00000475993 DKK4Q9UBT3 224 aa8.23□□□□□ -1.09
ABCF1-205ENST00000475993 IGHV1-18A0A0C4DH31 117 aa8.22□□□□□ -1.09
ABCF1-205ENST00000475993 H3BRN7 92 aa8.22□□□□□ -1.09
ABCF1-205ENST00000475993 MRPS12O15235 138 aaKnown RBP8.22□□□□□ -1.09
ABCF1-205ENST00000475993 IGFBP4P22692 258 aa8.22□□□□□ -1.09
ABCF1-205ENST00000475993 UBE2D1P51668 147 aa8.22□□□□□ -1.09
ABCF1-205ENST00000475993 FOXC1Q12948 553 aa8.22□□□□□ -1.09
ABCF1-205ENST00000475993 FAM216BQ8N7L0 139 aa8.22□□□□□ -1.09
ABCF1-205ENST00000475993 MSRB1Q9NZV6 116 aa8.22□□□□□ -1.09
ABCF1-205ENST00000475993 RAI1Q7Z5J4 1906 aaPredicted RBP8.22□□□□□ -1.09
ABCF1-205ENST00000475993 KIR2DL5BQ8NHK3 375 aa8.22□□□□□ -1.09
ABCF1-205ENST00000475993 ODF3Q96PU9 254 aa8.22□□□□□ -1.09
ABCF1-205ENST00000475993 PSMG3-AS1Q96PY0 264 aa8.22□□□□□ -1.09
ABCF1-205ENST00000475993 CCL13Q99616 98 aa8.22□□□□□ -1.09
ABCF1-205ENST00000475993 MSRB2Q9Y3D2 182 aa8.22□□□□□ -1.09
ABCF1-205ENST00000475993 TRGV5A0A0B4J1U4 118 aa8.21□□□□□ -1.09
ABCF1-205ENST00000475993 C4orf26Q17RF5 130 aa8.21□□□□□ -1.09
ABCF1-205ENST00000475993 FAM57AQ8TBR7 257 aa8.21□□□□□ -1.09
ABCF1-205ENST00000475993 BAALCQ8WXS3 180 aa8.21□□□□□ -1.09
ABCF1-205ENST00000475993 LGALS1P09382 135 aaKnown RBP8.21□□□□□ -1.1
ABCF1-205ENST00000475993 CD7P09564 240 aa8.21□□□□□ -1.1
ABCF1-205ENST00000475993 TMEM155Q4W5P6 130 aa8.21□□□□□ -1.1
ABCF1-205ENST00000475993 HRCT1Q6UXD1 115 aa8.21□□□□□ -1.1
ABCF1-205ENST00000475993 MYOZ3Q8TDC0 251 aa8.21□□□□□ -1.1
ABCF1-205ENST00000475993 CFHR4Q92496 578 aa8.21□□□□□ -1.1
ABCF1-205ENST00000475993 RNF7Q9UBF6 113 aa8.21□□□□□ -1.1
ABCF1-205ENST00000475993 NDUFA3O95167 84 aa8.2□□□□□ -1.1
ABCF1-205ENST00000475993 IGKV1-17P01599 117 aa8.2□□□□□ -1.1
ABCF1-205ENST00000475993 GATA1P15976 413 aaPredicted RBP8.2□□□□□ -1.1
ABCF1-205ENST00000475993 UCNP55089 124 aa8.2□□□□□ -1.1
ABCF1-205ENST00000475993 PLGLAQ15195 96 aa8.2□□□□□ -1.1
ABCF1-205ENST00000475993 MDS2Q8NDY4 140 aa8.2□□□□□ -1.1
ABCF1-205ENST00000475993 DEFB108BQ8NET1 73 aa8.2□□□□□ -1.1
ABCF1-205ENST00000475993 TRAV2A0A0B4J234 112 aa8.2□□□□□ -1.1
ABCF1-205ENST00000475993 MBD3L4A6NDZ8 208 aaPredicted RBP8.2□□□□□ -1.1
ABCF1-205ENST00000475993 MBD3L3A6NE82 208 aaPredicted RBP8.2□□□□□ -1.1
ABCF1-205ENST00000475993 MBD3L5A6NJ08 208 aaPredicted RBP8.2□□□□□ -1.1
ABCF1-205ENST00000475993 K7ESF4 209 aa8.2□□□□□ -1.1
ABCF1-205ENST00000475993 SPRY3O43610 288 aa8.2□□□□□ -1.1
ABCF1-205ENST00000475993 WT1P19544 449 aaPredicted RBP8.2□□□□□ -1.1
ABCF1-205ENST00000475993 RPL27AP46776 148 aaKnown RBP8.2□□□□□ -1.1
ABCF1-205ENST00000475993 LYRM7Q5U5X0 104 aa8.2□□□□□ -1.1
ABCF1-205ENST00000475993 ZNF318Q5VUA4 2279 aa8.2□□□□□ -1.1
ABCF1-205ENST00000475993 TRAV8-4A0A0B4J246 113 aa8.2□□□□□ -1.1
ABCF1-205ENST00000475993 APELAP0DMC3 54 aa8.2□□□□□ -1.1
ABCF1-205ENST00000475993 CD40P25942 277 aa8.2□□□□□ -1.1
ABCF1-205ENST00000475993 LY6DQ14210 128 aa8.2□□□□□ -1.1
ABCF1-205ENST00000475993 PRR25Q96S07 402 aa8.2□□□□□ -1.1
ABCF1-205ENST00000475993 ABCA1O95477 2261 aa8.19□□□□□ -1.1
ABCF1-205ENST00000475993 TRAV12-1A0A0B4J245 112 aa8.19□□□□□ -1.1
ABCF1-205ENST00000475993 ZNF80P51504 273 aaPredicted RBP8.19□□□□□ -1.1
ABCF1-205ENST00000475993 PDE6HQ13956 83 aa8.19□□□□□ -1.1
ABCF1-205ENST00000475993 AAMDCQ9H7C9 122 aa8.19□□□□□ -1.1
ABCF1-205ENST00000475993 A0A1B0GX51 115 aa8.19□□□□□ -1.1
ABCF1-205ENST00000475993 F8VRH5 84 aa8.19□□□□□ -1.1
ABCF1-205ENST00000475993 I3L2K1 104 aa8.19□□□□□ -1.1
ABCF1-205ENST00000475993 SLC25A20O43772 301 aa8.19□□□□□ -1.1
ABCF1-205ENST00000475993 LAGE3Q14657 143 aa8.19□□□□□ -1.1
ABCF1-205ENST00000475993 Q8N1Y9 231 aa8.19□□□□□ -1.1
ABCF1-205ENST00000475993 TIMD4Q96H15 378 aa8.19□□□□□ -1.1
ABCF1-205ENST00000475993 H7C1H1 209 aa8.18□□□□□ -1.1
ABCF1-205ENST00000475993 CNEP1R1Q8N9A8 125 aa8.18□□□□□ -1.1
ABCF1-205ENST00000475993 MRAPQ8TCY5 172 aa8.18□□□□□ -1.1
ABCF1-205ENST00000475993 NTN5Q8WTR8 489 aaPredicted RBP8.18□□□□□ -1.1
ABCF1-205ENST00000475993 RBAKDNA6NC62 111 aa8.18□□□□□ -1.1
ABCF1-205ENST00000475993 CCL3L1P16619 93 aa8.18□□□□□ -1.1
ABCF1-205ENST00000475993 C3orf36Q3SXR2 165 aa8.18□□□□□ -1.1
ABCF1-205ENST00000475993 TRPT1Q86TN4 253 aaKnown RBP8.18□□□□□ -1.1
ABCF1-205ENST00000475993 DTX2Q86UW9 622 aa8.18□□□□□ -1.1
ABCF1-205ENST00000475993 C3orf22Q8N5N4 141 aa8.18□□□□□ -1.1
ABCF1-205ENST00000475993 LINC00311Q8N616 119 aa8.18□□□□□ -1.1
ABCF1-205ENST00000475993 FAM236AA0A1B0GUQ0 79 aa8.17□□□□□ -1.1
ABCF1-205ENST00000475993 FAM236BA0A1B0GV22 79 aa8.17□□□□□ -1.1
ABCF1-205ENST00000475993 EDN2P20800 178 aa8.17□□□□□ -1.1
ABCF1-205ENST00000475993 ZNF491Q8N8L2 437 aa8.17□□□□□ -1.1
ABCF1-205ENST00000475993 OR11H6Q8NGC7 330 aa8.17□□□□□ -1.1
ABCF1-205ENST00000475993 MED13Q9UHV7 2174 aa8.17□□□□□ -1.1
ABCF1-205ENST00000475993 IGKV2-40A0A087WW87 121 aaPredicted RBP8.17□□□□□ -1.1
ABCF1-205ENST00000475993 TEX22C9J3V5 150 aa8.17□□□□□ -1.1
ABCF1-205ENST00000475993 IGKV2D-40P01614 121 aaPredicted RBP8.17□□□□□ -1.1
ABCF1-205ENST00000475993 CRYGBP07316 175 aa8.17□□□□□ -1.1
ABCF1-205ENST00000475993 ZNF56Q15929 161 aa8.17□□□□□ -1.1
ABCF1-205ENST00000475993 C8orf31Q8N9H6 132 aa8.17□□□□□ -1.1
ABCF1-205ENST00000475993 J3QLI3 93 aa8.16□□□□□ -1.1
ABCF1-205ENST00000475993 EFNA4P52798 201 aa8.16□□□□□ -1.1
ABCF1-205ENST00000475993 CRIP2P52943 208 aaPredicted RBP8.16□□□□□ -1.1
ABCF1-205ENST00000475993 TMEM219Q86XT9 240 aa8.16□□□□□ -1.1
ABCF1-205ENST00000475993 NDUFA11Q86Y39 141 aa8.16□□□□□ -1.1
ABCF1-205ENST00000475993 NRACQ8N912 160 aa8.16□□□□□ -1.1
ABCF1-205ENST00000475993 DUX3Q96PT4 197 aa8.16□□□□□ -1.1
ABCF1-205ENST00000475993 TEX36Q5VZQ5 186 aa8.16□□□□□ -1.1
ABCF1-205ENST00000475993 RNF125Q96EQ8 232 aa8.16□□□□□ -1.1
ABCF1-205ENST00000475993 LINC00477Q96M19 166 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 116.1 ms