RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 TENM2Q9NT68 2774 aa12.1□□□□□ -0.47
SCAF11-206ENST00000474828 TRBV6-1A0A0K0K1D8 114 aa12.1□□□□□ -0.47
SCAF11-206ENST00000474828 TEX48A0A1B0GUV7 120 aa12.1□□□□□ -0.47
SCAF11-206ENST00000474828 ZNF705GA8MUZ8 300 aaPredicted RBP12.1□□□□□ -0.47
SCAF11-206ENST00000474828 K7EQM0 130 aa12.1□□□□□ -0.47
SCAF11-206ENST00000474828 PRM2P04554 102 aa12.1□□□□□ -0.47
SCAF11-206ENST00000474828 UBE2G2P60604 165 aa12.1□□□□□ -0.47
SCAF11-206ENST00000474828 CCL20P78556 96 aa12.1□□□□□ -0.47
SCAF11-206ENST00000474828 ANXA2RQ3ZCQ2 193 aa12.1□□□□□ -0.47
SCAF11-206ENST00000474828 LYPD6BQ8NI32 183 aa12.1□□□□□ -0.47
SCAF11-206ENST00000474828 TMEM263Q8WUH6 116 aaKnown RBP12.1□□□□□ -0.47
SCAF11-206ENST00000474828 CELA1Q9UNI1 258 aa12.1□□□□□ -0.47
SCAF11-206ENST00000474828 PEX7O00628 323 aa12.09□□□□□ -0.47
SCAF11-206ENST00000474828 PAGE4O60829 102 aa12.09□□□□□ -0.47
SCAF11-206ENST00000474828 RNASE4P34096 147 aaKnown RBP12.09□□□□□ -0.47
SCAF11-206ENST00000474828 FLI1Q01543 452 aaPredicted RBP12.09□□□□□ -0.47
SCAF11-206ENST00000474828 TDRG1Q3Y452 100 aa12.09□□□□□ -0.47
SCAF11-206ENST00000474828 C16orf74Q96GX8 76 aa12.09□□□□□ -0.47
SCAF11-206ENST00000474828 PSG8Q9UQ74 426 aa12.09□□□□□ -0.47
SCAF11-206ENST00000474828 CXorf65A6NEN9 183 aa12.08□□□□□ -0.48
SCAF11-206ENST00000474828 LYRM9A8MSI8 78 aa12.08□□□□□ -0.48
SCAF11-206ENST00000474828 SPART-AS1P0CW21 52 aa12.08□□□□□ -0.48
SCAF11-206ENST00000474828 NANOS2P60321 138 aaKnown RBP12.08□□□□□ -0.48
SCAF11-206ENST00000474828 C12orf74Q32Q52 190 aa12.08□□□□□ -0.48
SCAF11-206ENST00000474828 TXNDC17Q9BRA2 123 aa12.08□□□□□ -0.48
SCAF11-206ENST00000474828 MANBALQ9NQG1 85 aa12.08□□□□□ -0.48
SCAF11-206ENST00000474828 TP53TG3Q9ULZ0 132 aa12.08□□□□□ -0.48
SCAF11-206ENST00000474828 TEX46H3BTG2 121 aa12.07□□□□□ -0.48
SCAF11-206ENST00000474828 ATP5G3P48201 142 aa12.07□□□□□ -0.48
SCAF11-206ENST00000474828 SAPCD1Q5SSQ6 148 aa12.07□□□□□ -0.48
SCAF11-206ENST00000474828 CEMP1Q6PRD7 247 aaPredicted RBP12.07□□□□□ -0.48
SCAF11-206ENST00000474828 Q6ZQT7 251 aa12.07□□□□□ -0.48
SCAF11-206ENST00000474828 LINC00612Q8N6U2 182 aa12.07□□□□□ -0.48
SCAF11-206ENST00000474828 C11orf72Q8NBR9 251 aa12.07□□□□□ -0.48
SCAF11-206ENST00000474828 C2CD4CQ8TF44 421 aa12.07□□□□□ -0.48
SCAF11-206ENST00000474828 LINC00479Q96M42 142 aa12.07□□□□□ -0.48
SCAF11-206ENST00000474828 TREM1Q9NP99 234 aa12.07□□□□□ -0.48
SCAF11-206ENST00000474828 RPH3ALQ9UNE2 315 aa12.07□□□□□ -0.48
SCAF11-206ENST00000474828 LYSTQ99698 3801 aa12.06□□□□□ -0.48
SCAF11-206ENST00000474828 C11orf94C9JXX5 98 aa12.06□□□□□ -0.48
SCAF11-206ENST00000474828 F6UZH7 168 aa12.06□□□□□ -0.48
SCAF11-206ENST00000474828 J3KRW8 73 aa12.06□□□□□ -0.48
SCAF11-206ENST00000474828 IFNA7P01567 189 aa12.06□□□□□ -0.48
SCAF11-206ENST00000474828 DAZ2Q13117 558 aaKnown RBP12.06□□□□□ -0.48
SCAF11-206ENST00000474828 IBA57Q5T440 356 aaKnown RBP12.06□□□□□ -0.48
SCAF11-206ENST00000474828 FAM222AQ5U5X8 452 aa12.06□□□□□ -0.48
SCAF11-206ENST00000474828 ALKAL2Q6UX46 152 aa12.06□□□□□ -0.48
SCAF11-206ENST00000474828 EIF4E3Q8N5X7 224 aaKnown RBP12.06□□□□□ -0.48
SCAF11-206ENST00000474828 RYR3Q15413 4870 aa12.06□□□□□ -0.48
SCAF11-206ENST00000474828 IGHV1OR15-1A0A075B7D0 117 aa12.05□□□□□ -0.48
SCAF11-206ENST00000474828 NUPR2A6NF83 97 aa12.05□□□□□ -0.48
SCAF11-206ENST00000474828 CST9LP1Q5W188 147 aa12.05□□□□□ -0.48
SCAF11-206ENST00000474828 ZNF680Q8NEM1 530 aa12.05□□□□□ -0.48
SCAF11-206ENST00000474828 PHLDA1Q8WV24 401 aaPredicted RBP12.05□□□□□ -0.48
SCAF11-206ENST00000474828 C11orf52Q96A22 123 aa12.05□□□□□ -0.48
SCAF11-206ENST00000474828 FMC1Q96HJ9 113 aa12.05□□□□□ -0.48
SCAF11-206ENST00000474828 TIMM8BQ9Y5J9 83 aaPredicted RBP12.05□□□□□ -0.48
SCAF11-206ENST00000474828 BLOC1S1P78537 153 aa12.04□□□□□ -0.48
SCAF11-206ENST00000474828 TMEM183BQ1AE95 376 aa12.04□□□□□ -0.48
SCAF11-206ENST00000474828 ZFAND6Q6FIF0 208 aa12.04□□□□□ -0.48
SCAF11-206ENST00000474828 Q6ZTC4 211 aa12.04□□□□□ -0.48
SCAF11-206ENST00000474828 Q86TA4 180 aa12.04□□□□□ -0.48
SCAF11-206ENST00000474828 SGK494Q96LW2 274 aa12.04□□□□□ -0.48
SCAF11-206ENST00000474828 NDFIP1Q9BT67 221 aa12.04□□□□□ -0.48
SCAF11-206ENST00000474828 ZFP30Q9Y2G7 519 aa12.04□□□□□ -0.48
SCAF11-206ENST00000474828 TRAV34A0A0B4J273 112 aa12.03□□□□□ -0.48
SCAF11-206ENST00000474828 TRAV21A0A0B4J279 112 aa12.03□□□□□ -0.48
SCAF11-206ENST00000474828 A0A1B0GV50 99 aa12.03□□□□□ -0.48
SCAF11-206ENST00000474828 LTAP01374 205 aa12.03□□□□□ -0.48
SCAF11-206ENST00000474828 S100A9P06702 114 aaKnown RBP12.03□□□□□ -0.48
SCAF11-206ENST00000474828 TAGLN2P37802 199 aaKnown RBP12.03□□□□□ -0.48
SCAF11-206ENST00000474828 ZNF80P51504 273 aaPredicted RBP12.03□□□□□ -0.48
SCAF11-206ENST00000474828 EMP1P54849 157 aa12.03□□□□□ -0.48
SCAF11-206ENST00000474828 C18orf15Q96N68 181 aa12.03□□□□□ -0.48
SCAF11-206ENST00000474828 GNG13Q9P2W3 67 aa12.03□□□□□ -0.48
SCAF11-206ENST00000474828 DNAH1Q9P2D7 4330 aa12.03□□□□□ -0.48
SCAF11-206ENST00000474828 SACSQ9NZJ4 4579 aa12.03□□□□□ -0.48
SCAF11-206ENST00000474828 TCL1AP56279 114 aa12.02□□□□□ -0.49
SCAF11-206ENST00000474828 SMUG1Q53HV7 270 aa12.02□□□□□ -0.49
SCAF11-206ENST00000474828 PRNTQ86SH4 94 aa12.02□□□□□ -0.49
SCAF11-206ENST00000474828 C8orf49Q96NF6 230 aa12.02□□□□□ -0.49
SCAF11-206ENST00000474828 TRAV10A0A0B4J240 114 aa12.01□□□□□ -0.49
SCAF11-206ENST00000474828 PFN1P07737 140 aaKnown RBP12.01□□□□□ -0.49
SCAF11-206ENST00000474828 BCL2P10415 239 aa12.01□□□□□ -0.49
SCAF11-206ENST00000474828 MEF2BQ02080 365 aaPredicted RBP12.01□□□□□ -0.49
SCAF11-206ENST00000474828 MLST8Q9BVC4 326 aa12.01□□□□□ -0.49
SCAF11-206ENST00000474828 C11orf21Q9P2W6 132 aa12.01□□□□□ -0.49
SCAF11-206ENST00000474828 SCO2A0A1W2PP80 73 aa12□□□□□ -0.49
SCAF11-206ENST00000474828 RGS13O14921 159 aa12□□□□□ -0.49
SCAF11-206ENST00000474828 NDUFS6O75380 124 aaKnown RBP12□□□□□ -0.49
SCAF11-206ENST00000474828 GCGP01275 180 aa12□□□□□ -0.49
SCAF11-206ENST00000474828 HTN1P15515 57 aa12□□□□□ -0.49
SCAF11-206ENST00000474828 TCTAP57738 103 aa12□□□□□ -0.49
SCAF11-206ENST00000474828 TEX261Q6UWH6 196 aa12□□□□□ -0.49
SCAF11-206ENST00000474828 CBY3A6NI87 242 aa11.99□□□□□ -0.49
SCAF11-206ENST00000474828 PDE6DO43924 150 aa11.99□□□□□ -0.49
SCAF11-206ENST00000474828 SPINK4O60575 86 aa11.99□□□□□ -0.49
SCAF11-206ENST00000474828 IFNA1P01562 189 aa11.99□□□□□ -0.49
SCAF11-206ENST00000474828 CRIP1P50238 77 aa11.99□□□□□ -0.49
SCAF11-206ENST00000474828 LGALS9BQ3B8N2 356 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms