RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-223ENST00000473345 SLC39A9Q9NUM3 307 aa6.55□□□□□ -1.36
MCF2L-223ENST00000473345 TRAV1-1A0A0B4J248 108 aa6.54□□□□□ -1.36
MCF2L-223ENST00000473345 A0A1W2PPQ1 181 aa6.54□□□□□ -1.36
MCF2L-223ENST00000473345 H3BTX0 84 aa6.54□□□□□ -1.36
MCF2L-223ENST00000473345 SLC17A3O00476 420 aa6.54□□□□□ -1.36
MCF2L-223ENST00000473345 RPL7P18124 248 aaKnown RBP6.54□□□□□ -1.36
MCF2L-223ENST00000473345 FHITP49789 147 aa6.54□□□□□ -1.36
MCF2L-223ENST00000473345 RAB14P61106 215 aa6.54□□□□□ -1.36
MCF2L-223ENST00000473345 RHOBP62745 196 aa6.54□□□□□ -1.36
MCF2L-223ENST00000473345 ZNF726P1Q15940 193 aa6.54□□□□□ -1.36
MCF2L-223ENST00000473345 PSG3Q16557 428 aa6.54□□□□□ -1.36
MCF2L-223ENST00000473345 NDUFA5Q16718 116 aa6.54□□□□□ -1.36
MCF2L-223ENST00000473345 TTC32Q5I0X7 151 aa6.54□□□□□ -1.36
MCF2L-223ENST00000473345 AKR1C8PQ5T2L2 129 aa6.54□□□□□ -1.36
MCF2L-223ENST00000473345 PXDC1Q5TGL8 231 aa6.54□□□□□ -1.36
MCF2L-223ENST00000473345 MIC13Q5XKP0 118 aa6.54□□□□□ -1.36
MCF2L-223ENST00000473345 PCNPQ8WW12 178 aaKnown RBP6.54□□□□□ -1.36
MCF2L-223ENST00000473345 ZNF503Q96F45 646 aa6.54□□□□□ -1.36
MCF2L-223ENST00000473345 PXMP4Q9Y6I8 212 aa6.54□□□□□ -1.36
MCF2L-223ENST00000473345 A0A087WTM6 91 aa6.53□□□□□ -1.36
MCF2L-223ENST00000473345 A0A087X0K7 114 aa6.53□□□□□ -1.36
MCF2L-223ENST00000473345 RAB2AP61019 212 aa6.53□□□□□ -1.36
MCF2L-223ENST00000473345 ACOT6Q3I5F7 207 aaPredicted RBP6.53□□□□□ -1.36
MCF2L-223ENST00000473345 LINC01559Q495D7 138 aa6.53□□□□□ -1.36
MCF2L-223ENST00000473345 FFAR4Q5NUL3 377 aa6.53□□□□□ -1.36
MCF2L-223ENST00000473345 Q6ZQT7 251 aa6.53□□□□□ -1.36
MCF2L-223ENST00000473345 ZNF493Q6ZR52 646 aa6.53□□□□□ -1.36
MCF2L-223ENST00000473345 Q6ZRG5 221 aa6.53□□□□□ -1.36
MCF2L-223ENST00000473345 RPUSD4Q96CM3 377 aaKnown RBP6.53□□□□□ -1.36
MCF2L-223ENST00000473345 SRRM2Q9UQ35 2752 aaKnown RBP6.53□□□□□ -1.36
MCF2L-223ENST00000473345 CTXND1A0A1B0GTU2 59 aa6.52□□□□□ -1.37
MCF2L-223ENST00000473345 J3KRW8 73 aa6.52□□□□□ -1.37
MCF2L-223ENST00000473345 OR5G3P0C626 314 aa6.52□□□□□ -1.37
MCF2L-223ENST00000473345 CT45A10P0DMU9 189 aa6.52□□□□□ -1.37
MCF2L-223ENST00000473345 CDKN1BP46527 198 aa6.52□□□□□ -1.37
MCF2L-223ENST00000473345 C4orf48Q5BLP8 95 aa6.52□□□□□ -1.37
MCF2L-223ENST00000473345 GCSAMLQ5JQS6 135 aa6.52□□□□□ -1.37
MCF2L-223ENST00000473345 EIF4E3Q8N5X7 224 aaKnown RBP6.52□□□□□ -1.37
MCF2L-223ENST00000473345 C11orf72Q8NBR9 251 aa6.52□□□□□ -1.37
MCF2L-223ENST00000473345 OR10G4Q8NGN3 311 aa6.52□□□□□ -1.37
MCF2L-223ENST00000473345 OR10G9Q8NGN4 311 aa6.52□□□□□ -1.37
MCF2L-223ENST00000473345 OR10G7Q8NGN6 311 aa6.52□□□□□ -1.37
MCF2L-223ENST00000473345 FAM213BQ8TBF2 198 aa6.52□□□□□ -1.37
MCF2L-223ENST00000473345 TMEM37Q8WXS4 190 aa6.52□□□□□ -1.37
MCF2L-223ENST00000473345 C18orf15Q96N68 181 aa6.52□□□□□ -1.37
MCF2L-223ENST00000473345 C20orf144Q9BQM9 153 aa6.52□□□□□ -1.37
MCF2L-223ENST00000473345 FAM30AQ9NZY2 134 aa6.52□□□□□ -1.37
MCF2L-223ENST00000473345 H3BNG1 76 aa6.51□□□□□ -1.37
MCF2L-223ENST00000473345 H7BYZ3 331 aa6.51□□□□□ -1.37
MCF2L-223ENST00000473345 NXPH4O95158 308 aa6.51□□□□□ -1.37
MCF2L-223ENST00000473345 H2AFB1P0C5Y9 115 aa6.51□□□□□ -1.37
MCF2L-223ENST00000473345 STAG3L2P0CL84 134 aa6.51□□□□□ -1.37
MCF2L-223ENST00000473345 STAG3L3P0CL85 134 aa6.51□□□□□ -1.37
MCF2L-223ENST00000473345 LCE2DQ5TA82 110 aaPredicted RBP6.51□□□□□ -1.37
MCF2L-223ENST00000473345 OR10J6PQ8NGY7 276 aa6.51□□□□□ -1.37
MCF2L-223ENST00000473345 RAB24Q969Q5 203 aa6.51□□□□□ -1.37
MCF2L-223ENST00000473345 ACTR3CQ9C0K3 210 aaPredicted RBP6.51□□□□□ -1.37
MCF2L-223ENST00000473345 DNAJC4Q9NNZ3 241 aa6.51□□□□□ -1.37
MCF2L-223ENST00000473345 ZNF331Q9NQX6 463 aaPredicted RBP6.51□□□□□ -1.37
MCF2L-223ENST00000473345 PGPEP1Q9NXJ5 209 aa6.51□□□□□ -1.37
MCF2L-223ENST00000473345 RAB19A4D1S5 217 aa6.5□□□□□ -1.37
MCF2L-223ENST00000473345 H3BQ15 152 aa6.5□□□□□ -1.37
MCF2L-223ENST00000473345 HYPMO75409 117 aa6.5□□□□□ -1.37
MCF2L-223ENST00000473345 CDC34P49427 236 aaPredicted RBP6.5□□□□□ -1.37
MCF2L-223ENST00000473345 ICAM4Q14773 271 aa6.5□□□□□ -1.37
MCF2L-223ENST00000473345 OR1L4Q8NGR5 311 aa6.5□□□□□ -1.37
MCF2L-223ENST00000473345 SUN5Q8TC36 379 aa6.5□□□□□ -1.37
MCF2L-223ENST00000473345 FRZBQ92765 325 aa6.5□□□□□ -1.37
MCF2L-223ENST00000473345 PFDN5Q99471 154 aa6.5□□□□□ -1.37
MCF2L-223ENST00000473345 MRPL32Q9BYC8 188 aaKnown RBP6.5□□□□□ -1.37
MCF2L-223ENST00000473345 GSN-AS1Q9NRJ2 163 aa6.5□□□□□ -1.37
MCF2L-223ENST00000473345 FUT9Q9Y231 359 aa6.5□□□□□ -1.37
MCF2L-223ENST00000473345 HIGD1AQ9Y241 93 aa6.5□□□□□ -1.37
MCF2L-223ENST00000473345 KLF12Q9Y4X4 402 aa6.5□□□□□ -1.37
MCF2L-223ENST00000473345 TRAV12-3A0A0B4J271 114 aa6.49□□□□□ -1.37
MCF2L-223ENST00000473345 A0A1W2PPV4 95 aa6.49□□□□□ -1.37
MCF2L-223ENST00000473345 MAP1LC3B2A6NCE7 125 aa6.49□□□□□ -1.37
MCF2L-223ENST00000473345 SIVA1O15304 175 aa6.49□□□□□ -1.37
MCF2L-223ENST00000473345 CCL20P78556 96 aa6.49□□□□□ -1.37
MCF2L-223ENST00000473345 DAZ2Q13117 558 aaKnown RBP6.49□□□□□ -1.37
MCF2L-223ENST00000473345 FAM122CQ6P4D5 195 aa6.49□□□□□ -1.37
MCF2L-223ENST00000473345 SLC7A5P1Q8MH63 180 aa6.49□□□□□ -1.37
MCF2L-223ENST00000473345 SFT2D1Q8WV19 159 aa6.49□□□□□ -1.37
MCF2L-223ENST00000473345 FAM167A-AS1Q96KT0 104 aa6.49□□□□□ -1.37
MCF2L-223ENST00000473345 MAP1LC3BQ9GZQ8 125 aa6.49□□□□□ -1.37
MCF2L-223ENST00000473345 TP53TG3Q9ULZ0 132 aa6.49□□□□□ -1.37
MCF2L-223ENST00000473345 TRAV5A0A0B4J249 113 aa6.48□□□□□ -1.37
MCF2L-223ENST00000473345 NDUFS6O75380 124 aaKnown RBP6.48□□□□□ -1.37
MCF2L-223ENST00000473345 IGHV3-53P01767 116 aa6.48□□□□□ -1.37
MCF2L-223ENST00000473345 ERVFC1-1P60608 527 aa6.48□□□□□ -1.37
MCF2L-223ENST00000473345 ERCC8Q13216 396 aa6.48□□□□□ -1.37
MCF2L-223ENST00000473345 PRR9Q5T870 116 aa6.48□□□□□ -1.37
MCF2L-223ENST00000473345 C10orf113Q5VZT2 155 aa6.48□□□□□ -1.37
MCF2L-223ENST00000473345 CDPF1Q6NVV7 123 aa6.48□□□□□ -1.37
MCF2L-223ENST00000473345 LYPD5Q6UWN5 251 aa6.48□□□□□ -1.37
MCF2L-223ENST00000473345 LCN15Q6UWW0 184 aa6.48□□□□□ -1.37
MCF2L-223ENST00000473345 MIR17HGQ75NE6 70 aa6.48□□□□□ -1.37
MCF2L-223ENST00000473345 WFDC10BQ8IUB3 73 aa6.48□□□□□ -1.37
MCF2L-223ENST00000473345 FAM210AQ96ND0 272 aa6.48□□□□□ -1.37
MCF2L-223ENST00000473345 SLC50A1Q9BRV3 221 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms