RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 ARL2-SNX15V9GYD0 113 aa10.91□□□□□ -0.66
SDC3-203ENST00000471567 STARD9Q9P2P6 4700 aa10.91□□□□□ -0.66
SDC3-203ENST00000471567 TRAV8-1A0A0A6YYK1 113 aa10.9□□□□□ -0.66
SDC3-203ENST00000471567 H2AFB1P0C5Y9 115 aa10.9□□□□□ -0.66
SDC3-203ENST00000471567 UBE2G2P60604 165 aa10.9□□□□□ -0.66
SDC3-203ENST00000471567 ANXA2RQ3ZCQ2 193 aa10.9□□□□□ -0.66
SDC3-203ENST00000471567 PRR9Q5T870 116 aa10.9□□□□□ -0.66
SDC3-203ENST00000471567 Q6AWC8 147 aa10.9□□□□□ -0.66
SDC3-203ENST00000471567 ZNF767PQ75MW2 155 aa10.9□□□□□ -0.66
SDC3-203ENST00000471567 EIF4E3Q8N5X7 224 aaKnown RBP10.9□□□□□ -0.66
SDC3-203ENST00000471567 CYB561D1Q8N8Q1 229 aa10.9□□□□□ -0.66
SDC3-203ENST00000471567 C2CD4CQ8TF44 421 aa10.9□□□□□ -0.66
SDC3-203ENST00000471567 TIMM8BQ9Y5J9 83 aaPredicted RBP10.9□□□□□ -0.66
SDC3-203ENST00000471567 IFNA7P01567 189 aa10.89□□□□□ -0.67
SDC3-203ENST00000471567 SULT1A2P50226 295 aa10.89□□□□□ -0.67
SDC3-203ENST00000471567 PPT1P50897 306 aa10.89□□□□□ -0.67
SDC3-203ENST00000471567 TCTAP57738 103 aa10.89□□□□□ -0.67
SDC3-203ENST00000471567 DAD1P61803 113 aa10.89□□□□□ -0.67
SDC3-203ENST00000471567 TMEM75Q8N9X5 138 aa10.89□□□□□ -0.67
SDC3-203ENST00000471567 ZNF680Q8NEM1 530 aa10.89□□□□□ -0.67
SDC3-203ENST00000471567 HIST1H2BAQ96A08 127 aa10.89□□□□□ -0.67
SDC3-203ENST00000471567 TCEAL7Q9BRU2 100 aa10.89□□□□□ -0.67
SDC3-203ENST00000471567 NDFIP1Q9BT67 221 aa10.89□□□□□ -0.67
SDC3-203ENST00000471567 TREM1Q9NP99 234 aa10.89□□□□□ -0.67
SDC3-203ENST00000471567 PSG8Q9UQ74 426 aa10.89□□□□□ -0.67
SDC3-203ENST00000471567 TENM2Q9NT68 2774 aa10.89□□□□□ -0.67
SDC3-203ENST00000471567 IGHV1OR15-1A0A075B7D0 117 aa10.88□□□□□ -0.67
SDC3-203ENST00000471567 DEFB131BA0A096LNP1 70 aa10.88□□□□□ -0.67
SDC3-203ENST00000471567 TRAV1-1A0A0B4J248 108 aa10.88□□□□□ -0.67
SDC3-203ENST00000471567 RGS13O14921 159 aa10.88□□□□□ -0.67
SDC3-203ENST00000471567 FLI1Q01543 452 aaPredicted RBP10.88□□□□□ -0.67
SDC3-203ENST00000471567 TVP23CQ96ET8 276 aa10.88□□□□□ -0.67
SDC3-203ENST00000471567 LCE6AA0A183 80 aa10.87□□□□□ -0.67
SDC3-203ENST00000471567 CBY3A6NI87 242 aa10.87□□□□□ -0.67
SDC3-203ENST00000471567 SNURFLB1AK76 121 aa10.87□□□□□ -0.67
SDC3-203ENST00000471567 F6UZH7 168 aa10.87□□□□□ -0.67
SDC3-203ENST00000471567 PEX7O00628 323 aa10.87□□□□□ -0.67
SDC3-203ENST00000471567 IGLV2-11P01706 119 aa10.87□□□□□ -0.67
SDC3-203ENST00000471567 SAPCD1Q5SSQ6 148 aa10.87□□□□□ -0.67
SDC3-203ENST00000471567 CST9LP1Q5W188 147 aa10.87□□□□□ -0.67
SDC3-203ENST00000471567 SGK494Q96LW2 274 aa10.87□□□□□ -0.67
SDC3-203ENST00000471567 NOP10Q9NPE3 64 aaKnown RBP10.87□□□□□ -0.67
SDC3-203ENST00000471567 TEX46H3BTG2 121 aa10.86□□□□□ -0.67
SDC3-203ENST00000471567 PAGE4O60829 102 aa10.86□□□□□ -0.67
SDC3-203ENST00000471567 DAZ2Q13117 558 aaKnown RBP10.86□□□□□ -0.67
SDC3-203ENST00000471567 IBA57Q5T440 356 aaKnown RBP10.86□□□□□ -0.67
SDC3-203ENST00000471567 Q6ZQT7 251 aa10.86□□□□□ -0.67
SDC3-203ENST00000471567 TRAV21A0A0B4J279 112 aa10.85□□□□□ -0.67
SDC3-203ENST00000471567 IGLL5B9A064 214 aa10.85□□□□□ -0.67
SDC3-203ENST00000471567 DEFB130BP0DP73 79 aa10.85□□□□□ -0.67
SDC3-203ENST00000471567 DEFB130AP0DP74 79 aa10.85□□□□□ -0.67
SDC3-203ENST00000471567 PRNTQ86SH4 94 aa10.85□□□□□ -0.67
SDC3-203ENST00000471567 LINC00612Q8N6U2 182 aa10.85□□□□□ -0.67
SDC3-203ENST00000471567 C11orf72Q8NBR9 251 aa10.85□□□□□ -0.67
SDC3-203ENST00000471567 FAM210BQ96KR6 192 aa10.85□□□□□ -0.67
SDC3-203ENST00000471567 A0A1B0GV50 99 aa10.84□□□□□ -0.67
SDC3-203ENST00000471567 TDRG1Q3Y452 100 aa10.84□□□□□ -0.67
SDC3-203ENST00000471567 FAM159AQ6UWV7 190 aa10.84□□□□□ -0.67
SDC3-203ENST00000471567 LINC00479Q96M42 142 aa10.84□□□□□ -0.67
SDC3-203ENST00000471567 GSN-AS1Q9NRJ2 163 aa10.84□□□□□ -0.67
SDC3-203ENST00000471567 KLF12Q9Y4X4 402 aa10.84□□□□□ -0.67
SDC3-203ENST00000471567 KMT2CQ8NEZ4 4911 aaKnown RBP10.84□□□□□ -0.67
SDC3-203ENST00000471567 TRAV34A0A0B4J273 112 aa10.83□□□□□ -0.68
SDC3-203ENST00000471567 TRBV6-1A0A0K0K1D8 114 aa10.83□□□□□ -0.68
SDC3-203ENST00000471567 ATP5G3P48201 142 aa10.83□□□□□ -0.68
SDC3-203ENST00000471567 TCL1AP56279 114 aa10.83□□□□□ -0.68
SDC3-203ENST00000471567 SMUG1Q53HV7 270 aa10.83□□□□□ -0.68
SDC3-203ENST00000471567 MUC21Q5SSG8 566 aa10.83□□□□□ -0.68
SDC3-203ENST00000471567 FMC1Q96HJ9 113 aa10.83□□□□□ -0.68
SDC3-203ENST00000471567 C8orf49Q96NF6 230 aa10.83□□□□□ -0.68
SDC3-203ENST00000471567 MANBALQ9NQG1 85 aa10.83□□□□□ -0.68
SDC3-203ENST00000471567 TP53TG3Q9ULZ0 132 aa10.83□□□□□ -0.68
SDC3-203ENST00000471567 APLNQ9ULZ1 77 aa10.83□□□□□ -0.68
SDC3-203ENST00000471567 TRGV11A0A075B6L2 103 aa10.82□□□□□ -0.68
SDC3-203ENST00000471567 IGHV4-4A0A075B6R2 117 aa10.82□□□□□ -0.68
SDC3-203ENST00000471567 ATP5G1P05496 136 aa10.82□□□□□ -0.68
SDC3-203ENST00000471567 NKX2-5P52952 324 aaPredicted RBP10.82□□□□□ -0.68
SDC3-203ENST00000471567 CCL20P78556 96 aa10.82□□□□□ -0.68
SDC3-203ENST00000471567 ZNF415Q09FC8 603 aa10.82□□□□□ -0.68
SDC3-203ENST00000471567 Q86TA4 180 aa10.82□□□□□ -0.68
SDC3-203ENST00000471567 KCNS1Q96KK3 526 aa10.82□□□□□ -0.68
SDC3-203ENST00000471567 ZFP30Q9Y2G7 519 aa10.82□□□□□ -0.68
SDC3-203ENST00000471567 DYNC2H1Q8NCM8 4307 aaKnown RBP10.82□□□□□ -0.68
SDC3-203ENST00000471567 GCGP01275 180 aa10.81□□□□□ -0.68
SDC3-203ENST00000471567 S100A9P06702 114 aaKnown RBP10.81□□□□□ -0.68
SDC3-203ENST00000471567 PFN1P07737 140 aaKnown RBP10.81□□□□□ -0.68
SDC3-203ENST00000471567 HTN3P15516 51 aa10.81□□□□□ -0.68
SDC3-203ENST00000471567 AKR1C3P42330 323 aa10.81□□□□□ -0.68
SDC3-203ENST00000471567 ZNF80P51504 273 aaPredicted RBP10.81□□□□□ -0.68
SDC3-203ENST00000471567 UBE2G1P62253 170 aa10.81□□□□□ -0.68
SDC3-203ENST00000471567 TMEM183BQ1AE95 376 aa10.81□□□□□ -0.68
SDC3-203ENST00000471567 COX8CQ7Z4L0 72 aa10.81□□□□□ -0.68
SDC3-203ENST00000471567 LINC00476Q8WZB0 136 aa10.81□□□□□ -0.68
SDC3-203ENST00000471567 TXNDC17Q9BRA2 123 aa10.81□□□□□ -0.68
SDC3-203ENST00000471567 NDUFAF3Q9BU61 184 aa10.81□□□□□ -0.68
SDC3-203ENST00000471567 GNG13Q9P2W3 67 aa10.81□□□□□ -0.68
SDC3-203ENST00000471567 GAGE12BA1L429 117 aa10.8□□□□□ -0.68
SDC3-203ENST00000471567 SPINK4O60575 86 aa10.8□□□□□ -0.68
SDC3-203ENST00000471567 GAGE7O76087 117 aa10.8□□□□□ -0.68
SDC3-203ENST00000471567 GAGE12FP0CL80 117 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 173.7 ms