RNA–Protein interactions for RNA: ENST00000470357.1

VAMP3-202, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 3 BASIC

Gene VAMP3, Length 954 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-202ENST00000470357 PPP1R14DQ9NXH3 145 aa4.97□□□□□ -1.61
VAMP3-202ENST00000470357 LENEPQ9Y5L5 61 aa4.97□□□□□ -1.61
VAMP3-202ENST00000470357 COL7A1Q02388 2944 aa4.96□□□□□ -1.61
VAMP3-202ENST00000470357 RYR2Q92736 4967 aa4.96□□□□□ -1.61
VAMP3-202ENST00000470357 SACSQ9NZJ4 4579 aa4.96□□□□□ -1.61
VAMP3-202ENST00000470357 SORL1Q92673 2214 aa4.96□□□□□ -1.62
VAMP3-202ENST00000470357 IGKV3-7A0A075B6H7 116 aa4.96□□□□□ -1.62
VAMP3-202ENST00000470357 A0A087WWC5 75 aa4.96□□□□□ -1.62
VAMP3-202ENST00000470357 B5MCH6 92 aa4.96□□□□□ -1.62
VAMP3-202ENST00000470357 M0R3E3 92 aa4.96□□□□□ -1.62
VAMP3-202ENST00000470357 DUSP14O95147 198 aaKnown RBP4.96□□□□□ -1.62
VAMP3-202ENST00000470357 LTAP01374 205 aa4.96□□□□□ -1.62
VAMP3-202ENST00000470357 IGLV1-51P01701 117 aa4.96□□□□□ -1.62
VAMP3-202ENST00000470357 CT45A10P0DMU9 189 aa4.96□□□□□ -1.62
VAMP3-202ENST00000470357 FHL2Q14192 279 aa4.96□□□□□ -1.62
VAMP3-202ENST00000470357 ADIRFQ15847 76 aa4.96□□□□□ -1.62
VAMP3-202ENST00000470357 GUCA2BQ16661 112 aa4.96□□□□□ -1.62
VAMP3-202ENST00000470357 CD300EQ496F6 205 aaPredicted RBP4.96□□□□□ -1.62
VAMP3-202ENST00000470357 EBLN2Q6P2I7 272 aa4.96□□□□□ -1.62
VAMP3-202ENST00000470357 Q86TA4 180 aa4.96□□□□□ -1.62
VAMP3-202ENST00000470357 LINC01551Q86U37 167 aa4.96□□□□□ -1.62
VAMP3-202ENST00000470357 TMEM183AQ8IXX5 376 aa4.96□□□□□ -1.62
VAMP3-202ENST00000470357 GBGT1Q8N5D6 347 aa4.96□□□□□ -1.62
VAMP3-202ENST00000470357 RNF182Q8N6D2 247 aa4.96□□□□□ -1.62
VAMP3-202ENST00000470357 C15orf54Q8N8G6 183 aa4.96□□□□□ -1.62
VAMP3-202ENST00000470357 FAM110AQ9BQ89 295 aa4.96□□□□□ -1.62
VAMP3-202ENST00000470357 DERL1Q9BUN8 251 aa4.96□□□□□ -1.62
VAMP3-202ENST00000470357 CTDSP1Q9GZU7 261 aa4.96□□□□□ -1.62
VAMP3-202ENST00000470357 TMEM242Q9NWH2 141 aa4.96□□□□□ -1.62
VAMP3-202ENST00000470357 ZMAT5Q9UDW3 170 aaKnown RBP4.96□□□□□ -1.62
VAMP3-202ENST00000470357 PSG8Q9UQ74 426 aa4.96□□□□□ -1.62
VAMP3-202ENST00000470357 DYNC2H1Q8NCM8 4307 aaKnown RBP4.96□□□□□ -1.62
VAMP3-202ENST00000470357 TRAV34A0A0B4J273 112 aa4.95□□□□□ -1.62
VAMP3-202ENST00000470357 C7orf77A4D0Y5 90 aa4.95□□□□□ -1.62
VAMP3-202ENST00000470357 GCGP01275 180 aa4.95□□□□□ -1.62
VAMP3-202ENST00000470357 EDN2P20800 178 aa4.95□□□□□ -1.62
VAMP3-202ENST00000470357 TFPI2P48307 235 aa4.95□□□□□ -1.62
VAMP3-202ENST00000470357 ZNF138P52744 262 aa4.95□□□□□ -1.62
VAMP3-202ENST00000470357 RPL23P62829 140 aaKnown RBP4.95□□□□□ -1.62
VAMP3-202ENST00000470357 PSMG4Q5JS54 123 aa4.95□□□□□ -1.62
VAMP3-202ENST00000470357 FOXI2Q6ZQN5 318 aa4.95□□□□□ -1.62
VAMP3-202ENST00000470357 COX8CQ7Z4L0 72 aa4.95□□□□□ -1.62
VAMP3-202ENST00000470357 PRNTQ86SH4 94 aa4.95□□□□□ -1.62
VAMP3-202ENST00000470357 WFDC9Q8NEX5 89 aa4.95□□□□□ -1.62
VAMP3-202ENST00000470357 OR8A1Q8NGG7 326 aa4.95□□□□□ -1.62
VAMP3-202ENST00000470357 OCC1Q8TAD7 63 aa4.95□□□□□ -1.62
VAMP3-202ENST00000470357 IGF2BP2-AS1Q96M15 143 aa4.95□□□□□ -1.62
VAMP3-202ENST00000470357 ODF3Q96PU9 254 aa4.95□□□□□ -1.62
VAMP3-202ENST00000470357 TRBV20OR9-2A0A075B6H5 130 aa4.94□□□□□ -1.62
VAMP3-202ENST00000470357 IGKV2-40A0A087WW87 121 aaPredicted RBP4.94□□□□□ -1.62
VAMP3-202ENST00000470357 CXorf65A6NEN9 183 aa4.94□□□□□ -1.62
VAMP3-202ENST00000470357 ZNF705FA8MVS1 300 aaPredicted RBP4.94□□□□□ -1.62
VAMP3-202ENST00000470357 H7BYZ3 331 aa4.94□□□□□ -1.62
VAMP3-202ENST00000470357 IGKV2D-40P01614 121 aaPredicted RBP4.94□□□□□ -1.62
VAMP3-202ENST00000470357 IGLV2-11P01706 119 aa4.94□□□□□ -1.62
VAMP3-202ENST00000470357 ZNF688P0C7X2 276 aa4.94□□□□□ -1.62
VAMP3-202ENST00000470357 MGST1P10620 155 aaKnown RBP4.94□□□□□ -1.62
VAMP3-202ENST00000470357 HLA-DMBP28068 263 aa4.94□□□□□ -1.62
VAMP3-202ENST00000470357 TSPOP30536 169 aa4.94□□□□□ -1.62
VAMP3-202ENST00000470357 RPL19P84098 196 aaKnown RBP4.94□□□□□ -1.62
VAMP3-202ENST00000470357 BEAN1Q3B7T3 259 aa4.94□□□□□ -1.62
VAMP3-202ENST00000470357 SMUG1Q53HV7 270 aa4.94□□□□□ -1.62
VAMP3-202ENST00000470357 KPRPQ5T749 579 aaPredicted RBP4.94□□□□□ -1.62
VAMP3-202ENST00000470357 FAM231DQ6ZW35 169 aa4.94□□□□□ -1.62
VAMP3-202ENST00000470357 ISOC2Q96AB3 205 aa4.94□□□□□ -1.62
VAMP3-202ENST00000470357 DAZAP1Q96EP5 407 aaKnown RBP4.94□□□□□ -1.62
VAMP3-202ENST00000470357 SFRP2Q96HF1 295 aa4.94□□□□□ -1.62
VAMP3-202ENST00000470357 BTF3L4Q96K17 158 aa4.94□□□□□ -1.62
VAMP3-202ENST00000470357 LINC00479Q96M42 142 aa4.94□□□□□ -1.62
VAMP3-202ENST00000470357 PRR25Q96S07 402 aa4.94□□□□□ -1.62
VAMP3-202ENST00000470357 ASCL2Q99929 193 aa4.94□□□□□ -1.62
VAMP3-202ENST00000470357 MLST8Q9BVC4 326 aa4.94□□□□□ -1.62
VAMP3-202ENST00000470357 RPS10P5Q9NQ39 176 aa4.94□□□□□ -1.62
VAMP3-202ENST00000470357 OSTCQ9NRP0 149 aa4.94□□□□□ -1.62
VAMP3-202ENST00000470357 ZNF492Q9P255 531 aa4.94□□□□□ -1.62
VAMP3-202ENST00000470357 TRAV8-1A0A0A6YYK1 113 aa4.93□□□□□ -1.62
VAMP3-202ENST00000470357 XKRY2A2RUG3 117 aa4.93□□□□□ -1.62
VAMP3-202ENST00000470357 OR11H12B2RN74 326 aa4.93□□□□□ -1.62
VAMP3-202ENST00000470357 IGLV2-8P01709 118 aa4.93□□□□□ -1.62
VAMP3-202ENST00000470357 S100PP25815 95 aa4.93□□□□□ -1.62
VAMP3-202ENST00000470357 LEPP41159 167 aa4.93□□□□□ -1.62
VAMP3-202ENST00000470357 ERVFC1-1P60608 527 aa4.93□□□□□ -1.62
VAMP3-202ENST00000470357 HIST1H1AQ02539 215 aaPredicted RBP4.93□□□□□ -1.62
VAMP3-202ENST00000470357 IBA57Q5T440 356 aaKnown RBP4.93□□□□□ -1.62
VAMP3-202ENST00000470357 FAM162BQ5T6X4 162 aa4.93□□□□□ -1.62
VAMP3-202ENST00000470357 GTSCR1Q86UQ5 136 aa4.93□□□□□ -1.62
VAMP3-202ENST00000470357 OR4B1Q8NGF8 309 aa4.93□□□□□ -1.62
VAMP3-202ENST00000470357 OR10G8Q8NGN5 311 aa4.93□□□□□ -1.62
VAMP3-202ENST00000470357 IMMP2LQ96T52 175 aa4.93□□□□□ -1.62
VAMP3-202ENST00000470357 VGLL1Q99990 258 aa4.93□□□□□ -1.62
VAMP3-202ENST00000470357 AGPAT4-IT1Q9H0P7 198 aa4.93□□□□□ -1.62
VAMP3-202ENST00000470357 SAV1Q9H4B6 383 aaPredicted RBP4.93□□□□□ -1.62
VAMP3-202ENST00000470357 TUBA4BQ9H853 241 aa4.93□□□□□ -1.62
VAMP3-202ENST00000470357 MAP6D1Q9H9H5 199 aa4.93□□□□□ -1.62
VAMP3-202ENST00000470357 SMCO4Q9NRQ5 59 aa4.93□□□□□ -1.62
VAMP3-202ENST00000470357 NOTCH3Q9UM47 2321 aa4.93□□□□□ -1.62
VAMP3-202ENST00000470357 ZNF256Q9Y2P7 627 aaPredicted RBP4.93□□□□□ -1.62
VAMP3-202ENST00000470357 DNAH1Q9P2D7 4330 aa4.92□□□□□ -1.62
VAMP3-202ENST00000470357 TRAV9-1A0A075B6T8 112 aa4.92□□□□□ -1.62
VAMP3-202ENST00000470357 A0A0J9YX75 114 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms