RNA–Protein interactions for RNA: ENST00000469550.6

HDAC3-205, Transcript of histone deacetylase 3, humanhuman

TSL 1 (best)

Gene HDAC3, Length 1,952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-205ENST00000469550 MRPS12O15235 138 aaKnown RBP7.48□□□□□ -1.21
HDAC3-205ENST00000469550 NDUFB3O43676 98 aa7.48□□□□□ -1.21
HDAC3-205ENST00000469550 TMEM11P17152 192 aa7.48□□□□□ -1.21
HDAC3-205ENST00000469550 PDE6HQ13956 83 aa7.48□□□□□ -1.21
HDAC3-205ENST00000469550 LYZL1Q6UWQ5 148 aa7.48□□□□□ -1.21
HDAC3-205ENST00000469550 S100A7AQ86SG5 101 aa7.48□□□□□ -1.21
HDAC3-205ENST00000469550 PPIAL4EA0A075B759 164 aa7.48□□□□□ -1.21
HDAC3-205ENST00000469550 ENSAO43768 121 aaKnown RBP7.48□□□□□ -1.21
HDAC3-205ENST00000469550 IGKV1-17P01599 117 aa7.48□□□□□ -1.21
HDAC3-205ENST00000469550 PPIAL4FP0DN26 164 aa7.48□□□□□ -1.21
HDAC3-205ENST00000469550 HLA-DRB4P13762 266 aa7.48□□□□□ -1.21
HDAC3-205ENST00000469550 SRD5A1P18405 259 aa7.48□□□□□ -1.21
HDAC3-205ENST00000469550 TMEM155Q4W5P6 130 aa7.48□□□□□ -1.21
HDAC3-205ENST00000469550 SAMD13Q5VXD3 122 aa7.48□□□□□ -1.21
HDAC3-205ENST00000469550 PCP2Q8IVA1 136 aa7.48□□□□□ -1.21
HDAC3-205ENST00000469550 AMN1Q8IY45 258 aa7.48□□□□□ -1.21
HDAC3-205ENST00000469550 RAB37Q96AX2 223 aa7.48□□□□□ -1.21
HDAC3-205ENST00000469550 TMEM133Q9H2Q1 129 aa7.48□□□□□ -1.21
HDAC3-205ENST00000469550 HLA-DRB4X5D2U9 266 aa7.48□□□□□ -1.21
HDAC3-205ENST00000469550 IGHV4-61A0A0C4DH41 118 aa7.47□□□□□ -1.21
HDAC3-205ENST00000469550 WI2-2373I1.2A0A1W2PRP0 233 aa7.47□□□□□ -1.21
HDAC3-205ENST00000469550 C17orf100A8MU93 164 aa7.47□□□□□ -1.21
HDAC3-205ENST00000469550 TMEM178BH3BS89 294 aa7.47□□□□□ -1.21
HDAC3-205ENST00000469550 LY6HO94772 140 aa7.47□□□□□ -1.21
HDAC3-205ENST00000469550 SRSF2Q01130 221 aaKnown RBP7.47□□□□□ -1.21
HDAC3-205ENST00000469550 PLGLAQ15195 96 aa7.47□□□□□ -1.21
HDAC3-205ENST00000469550 ADIPOQQ15848 244 aa7.47□□□□□ -1.21
HDAC3-205ENST00000469550 PPP1R27Q86WC6 154 aa7.47□□□□□ -1.21
HDAC3-205ENST00000469550 RNF5Q99942 180 aa7.47□□□□□ -1.21
HDAC3-205ENST00000469550 TM2D2Q9BX73 214 aa7.47□□□□□ -1.21
HDAC3-205ENST00000469550 KAAG1Q9UBP8 84 aa7.47□□□□□ -1.21
HDAC3-205ENST00000469550 SMPXQ9UHP9 88 aa7.47□□□□□ -1.21
HDAC3-205ENST00000469550 IGHV3-21A0A0B4J1V1 117 aa7.46□□□□□ -1.21
HDAC3-205ENST00000469550 TMEM213A2RRL7 107 aa7.46□□□□□ -1.21
HDAC3-205ENST00000469550 IGHV1-8P0DP01 117 aa7.46□□□□□ -1.21
HDAC3-205ENST00000469550 EVI2AP22794 236 aa7.46□□□□□ -1.21
HDAC3-205ENST00000469550 NMUP48645 174 aa7.46□□□□□ -1.21
HDAC3-205ENST00000469550 ANK2Q01484 3957 aa7.46□□□□□ -1.21
HDAC3-205ENST00000469550 PHLDA1Q8WV24 401 aaPredicted RBP7.46□□□□□ -1.21
HDAC3-205ENST00000469550 C17orf77Q96MU5 243 aa7.46□□□□□ -1.21
HDAC3-205ENST00000469550 VGLL1Q99990 258 aa7.46□□□□□ -1.21
HDAC3-205ENST00000469550 NAA38Q9BRA0 125 aaKnown RBP7.46□□□□□ -1.21
HDAC3-205ENST00000469550 TPPP3Q9BW30 176 aa7.46□□□□□ -1.21
HDAC3-205ENST00000469550 HHLA3Q9XRX5 114 aa7.46□□□□□ -1.21
HDAC3-205ENST00000469550 CUBNO60494 3623 aa7.46□□□□□ -1.22
HDAC3-205ENST00000469550 F8W1H4 67 aa7.46□□□□□ -1.22
HDAC3-205ENST00000469550 SH2D1AO60880 128 aa7.46□□□□□ -1.22
HDAC3-205ENST00000469550 NPYP01303 97 aa7.46□□□□□ -1.22
HDAC3-205ENST00000469550 RBP4P02753 201 aa7.46□□□□□ -1.22
HDAC3-205ENST00000469550 PPIAL4GP0DN37 164 aa7.46□□□□□ -1.22
HDAC3-205ENST00000469550 FCER1GP30273 86 aa7.46□□□□□ -1.22
HDAC3-205ENST00000469550 CKS2P33552 79 aa7.46□□□□□ -1.22
HDAC3-205ENST00000469550 CCL8P80075 99 aa7.46□□□□□ -1.22
HDAC3-205ENST00000469550 FOXI2Q6ZQN5 318 aa7.46□□□□□ -1.22
HDAC3-205ENST00000469550 BCL6BQ8N143 479 aaPredicted RBP7.46□□□□□ -1.22
HDAC3-205ENST00000469550 ZNF491Q8N8L2 437 aa7.46□□□□□ -1.22
HDAC3-205ENST00000469550 RAB1BQ9H0U4 201 aa7.46□□□□□ -1.22
HDAC3-205ENST00000469550 AAMDCQ9H7C9 122 aa7.46□□□□□ -1.22
HDAC3-205ENST00000469550 J3QR89 54 aa7.45□□□□□ -1.22
HDAC3-205ENST00000469550 IGLC6P0CF74 106 aa7.45□□□□□ -1.22
HDAC3-205ENST00000469550 ODF1Q14990 250 aa7.45□□□□□ -1.22
HDAC3-205ENST00000469550 TAL2Q16559 108 aa7.45□□□□□ -1.22
HDAC3-205ENST00000469550 C8orf49Q96NF6 230 aa7.45□□□□□ -1.22
HDAC3-205ENST00000469550 SIGMAR1Q99720 223 aa7.45□□□□□ -1.22
HDAC3-205ENST00000469550 CNFNQ9BYD5 112 aa7.45□□□□□ -1.22
HDAC3-205ENST00000469550 BPESC1Q9GZL8 116 aa7.45□□□□□ -1.22
HDAC3-205ENST00000469550 DKK2Q9UBU2 259 aa7.45□□□□□ -1.22
HDAC3-205ENST00000469550 TEX48A0A1B0GUV7 120 aa7.44□□□□□ -1.22
HDAC3-205ENST00000469550 E9PLD3 99 aa7.44□□□□□ -1.22
HDAC3-205ENST00000469550 K7EIM0 57 aa7.44□□□□□ -1.22
HDAC3-205ENST00000469550 IGLV1-47P01700 117 aa7.44□□□□□ -1.22
HDAC3-205ENST00000469550 GCSHP23434 173 aa7.44□□□□□ -1.22
HDAC3-205ENST00000469550 CNTFRP26992 372 aa7.44□□□□□ -1.22
HDAC3-205ENST00000469550 BMI1P35226 326 aa7.44□□□□□ -1.22
HDAC3-205ENST00000469550 FXYD2P54710 66 aa7.44□□□□□ -1.22
HDAC3-205ENST00000469550 CD300EQ496F6 205 aaPredicted RBP7.44□□□□□ -1.22
HDAC3-205ENST00000469550 ZNF562Q6V9R5 426 aa7.44□□□□□ -1.22
HDAC3-205ENST00000469550 RNF125Q96EQ8 232 aa7.44□□□□□ -1.22
HDAC3-205ENST00000469550 CHAC1Q9BUX1 264 aa7.44□□□□□ -1.22
HDAC3-205ENST00000469550 MAP1LC3AQ9H492 121 aa7.44□□□□□ -1.22
HDAC3-205ENST00000469550 NXT2Q9NPJ8 142 aaKnown RBP7.44□□□□□ -1.22
HDAC3-205ENST00000469550 IGHV3-72A0A0B4J1Y9 119 aa7.44□□□□□ -1.22
HDAC3-205ENST00000469550 PPIAL4CA0A0B4J2A2 164 aa7.44□□□□□ -1.22
HDAC3-205ENST00000469550 M0R3E3 92 aa7.44□□□□□ -1.22
HDAC3-205ENST00000469550 ATP5LO75964 103 aa7.44□□□□□ -1.22
HDAC3-205ENST00000469550 RPL24P83731 157 aaKnown RBP7.44□□□□□ -1.22
HDAC3-205ENST00000469550 LYPD2Q6UXB3 125 aa7.44□□□□□ -1.22
HDAC3-205ENST00000469550 CTSZQ9UBR2 303 aa7.44□□□□□ -1.22
HDAC3-205ENST00000469550 IGHV1-3A0A0C4DH29 117 aa7.43□□□□□ -1.22
HDAC3-205ENST00000469550 ZNF207O43670 478 aaKnown RBP7.43□□□□□ -1.22
HDAC3-205ENST00000469550 TGFAP01135 160 aa7.43□□□□□ -1.22
HDAC3-205ENST00000469550 IGKCP01834 107 aa7.43□□□□□ -1.22
HDAC3-205ENST00000469550 APELAP0DMC3 54 aa7.43□□□□□ -1.22
HDAC3-205ENST00000469550 FCGR2BP31994 310 aaPredicted RBP7.43□□□□□ -1.22
HDAC3-205ENST00000469550 IL17RELQ6ZVW7 336 aa7.43□□□□□ -1.22
HDAC3-205ENST00000469550 CEND1Q8N111 149 aa7.43□□□□□ -1.22
HDAC3-205ENST00000469550 LINC01356Q8N9X3 169 aa7.43□□□□□ -1.22
HDAC3-205ENST00000469550 ZNF48Q96MX3 618 aaPredicted RBP7.43□□□□□ -1.22
HDAC3-205ENST00000469550 PRR25Q96S07 402 aa7.43□□□□□ -1.22
HDAC3-205ENST00000469550 TRBV25-1A0A075B6N4 114 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms