RNA–Protein interactions for RNA: ENST00000468402.1

HMGB1P25-201, Transcript of high mobility group box 1 pseudogene 25, humanhuman

BASIC

Gene HMGB1P25, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P25-201ENST00000468402 C20orf202A1L168 122 aa2.34□□□□□ -2.03
HMGB1P25-201ENST00000468402 IZUMO1RA6ND01 250 aa2.34□□□□□ -2.03
HMGB1P25-201ENST00000468402 A6NED7 52 aa2.34□□□□□ -2.03
HMGB1P25-201ENST00000468402 ARRDC5A6NEK1 342 aa2.34□□□□□ -2.03
HMGB1P25-201ENST00000468402 IGLL5B9A064 214 aa2.34□□□□□ -2.03
HMGB1P25-201ENST00000468402 TP53I11O14683 189 aa2.34□□□□□ -2.03
HMGB1P25-201ENST00000468402 RER1O15258 196 aa2.34□□□□□ -2.03
HMGB1P25-201ENST00000468402 PIN1P1O15428 100 aa2.34□□□□□ -2.03
HMGB1P25-201ENST00000468402 GNG7O60262 68 aa2.34□□□□□ -2.03
HMGB1P25-201ENST00000468402 FSTL3O95633 263 aa2.34□□□□□ -2.03
HMGB1P25-201ENST00000468402 S100A8P05109 93 aa2.34□□□□□ -2.03
HMGB1P25-201ENST00000468402 OR5AC1P0C628 307 aa2.34□□□□□ -2.03
HMGB1P25-201ENST00000468402 METTL15P1P0C7V9 234 aa2.34□□□□□ -2.03
HMGB1P25-201ENST00000468402 SMIM6P0DI80 62 aa2.34□□□□□ -2.03
HMGB1P25-201ENST00000468402 ZNF32P17041 273 aa2.34□□□□□ -2.03
HMGB1P25-201ENST00000468402 MPV17P39210 176 aa2.34□□□□□ -2.03
HMGB1P25-201ENST00000468402 LPAR6P43657 344 aa2.34□□□□□ -2.03
HMGB1P25-201ENST00000468402 SP6Q3SY56 376 aa2.34□□□□□ -2.03
HMGB1P25-201ENST00000468402 LINC01590Q5TEZ4 76 aa2.34□□□□□ -2.03
HMGB1P25-201ENST00000468402 Q6P435 159 aa2.34□□□□□ -2.03
HMGB1P25-201ENST00000468402 ZNF880Q6PDB4 577 aa2.34□□□□□ -2.03
HMGB1P25-201ENST00000468402 SLC25A34Q6PIV7 304 aa2.34□□□□□ -2.03
HMGB1P25-201ENST00000468402 ZNF767PQ75MW2 155 aa2.34□□□□□ -2.03
HMGB1P25-201ENST00000468402 GPHB5Q86YW7 130 aa2.34□□□□□ -2.03
HMGB1P25-201ENST00000468402 H1FOOQ8IZA3 346 aaPredicted RBP2.34□□□□□ -2.03
HMGB1P25-201ENST00000468402 RPRMLQ8N4K4 120 aa2.34□□□□□ -2.03
HMGB1P25-201ENST00000468402 C12orf45Q8N5I9 185 aaPredicted RBP2.34□□□□□ -2.03
HMGB1P25-201ENST00000468402 ACBD7Q8N6N7 88 aa2.34□□□□□ -2.03
HMGB1P25-201ENST00000468402 FDCSPQ8NFU4 85 aa2.34□□□□□ -2.03
HMGB1P25-201ENST00000468402 H1FXQ92522 213 aaKnown RBP2.34□□□□□ -2.03
HMGB1P25-201ENST00000468402 SLAMF6Q96DU3 332 aa2.34□□□□□ -2.03
HMGB1P25-201ENST00000468402 IP6K3Q96PC2 410 aa2.34□□□□□ -2.03
HMGB1P25-201ENST00000468402 YPEL2Q96QA6 119 aa2.34□□□□□ -2.03
HMGB1P25-201ENST00000468402 SHANK2-AS3Q9BTD1 123 aa2.34□□□□□ -2.03
HMGB1P25-201ENST00000468402 TTTY12Q9BZ98 90 aa2.34□□□□□ -2.03
HMGB1P25-201ENST00000468402 NDUFB11Q9NX14 153 aa2.34□□□□□ -2.03
HMGB1P25-201ENST00000468402 TAS2R4Q9NYW5 299 aa2.34□□□□□ -2.03
HMGB1P25-201ENST00000468402 MCTS1Q9ULC4 181 aaKnown RBP2.34□□□□□ -2.03
HMGB1P25-201ENST00000468402 MRPS16Q9Y3D3 137 aaKnown RBP2.34□□□□□ -2.03
HMGB1P25-201ENST00000468402 TRAPPC1Q9Y5R8 145 aa2.34□□□□□ -2.03
HMGB1P25-201ENST00000468402 HSPE1-MOB4S4R3N1 261 aa2.34□□□□□ -2.03
HMGB1P25-201ENST00000468402 PIEZO2Q9H5I5 2752 aa2.34□□□□□ -2.04
HMGB1P25-201ENST00000468402 CFAP47Q6ZTR5 3102 aa2.34□□□□□ -2.04
HMGB1P25-201ENST00000468402 LRBAP50851 2863 aa2.34□□□□□ -2.04
HMGB1P25-201ENST00000468402 CACNA1GO43497 2377 aa2.34□□□□□ -2.04
HMGB1P25-201ENST00000468402 MUC6Q6W4X9 2439 aa2.33□□□□□ -2.04
HMGB1P25-201ENST00000468402 CEP250Q9BV73 2442 aa2.33□□□□□ -2.04
HMGB1P25-201ENST00000468402 DCHS1Q96JQ0 3298 aa2.33□□□□□ -2.04
HMGB1P25-201ENST00000468402 DMXL2Q8TDJ6 3036 aa2.33□□□□□ -2.04
HMGB1P25-201ENST00000468402 A0A1W2PQD3 144 aa2.33□□□□□ -2.04
HMGB1P25-201ENST00000468402 F6UZH7 168 aa2.33□□□□□ -2.04
HMGB1P25-201ENST00000468402 J3QRE1 110 aa2.33□□□□□ -2.04
HMGB1P25-201ENST00000468402 TAX1BP3O14907 124 aa2.33□□□□□ -2.04
HMGB1P25-201ENST00000468402 SLC22A1O15245 554 aa2.33□□□□□ -2.04
HMGB1P25-201ENST00000468402 IGHV1-46P01743 117 aa2.33□□□□□ -2.04
HMGB1P25-201ENST00000468402 TRGC2P03986 189 aa2.33□□□□□ -2.04
HMGB1P25-201ENST00000468402 FABP2P12104 132 aa2.33□□□□□ -2.04
HMGB1P25-201ENST00000468402 PIPP12273 146 aaPredicted RBP2.33□□□□□ -2.04
HMGB1P25-201ENST00000468402 MUC1P15941 1255 aaPredicted RBP2.33□□□□□ -2.04
HMGB1P25-201ENST00000468402 GUCA1AP43080 201 aaPredicted RBP2.33□□□□□ -2.04
HMGB1P25-201ENST00000468402 RPL27AP46776 148 aaKnown RBP2.33□□□□□ -2.04
HMGB1P25-201ENST00000468402 EVX1P49640 407 aa2.33□□□□□ -2.04
HMGB1P25-201ENST00000468402 RBP2P50120 134 aa2.33□□□□□ -2.04
HMGB1P25-201ENST00000468402 FGF12P61328 243 aa2.33□□□□□ -2.04
HMGB1P25-201ENST00000468402 RPS11P62280 158 aaKnown RBP eCLIP2.33□□□□□ -2.04
HMGB1P25-201ENST00000468402 HIST1H4AP62805 103 aaKnown RBP2.33□□□□□ -2.04
HMGB1P25-201ENST00000468402 ZNF816Q0VGE8 651 aaPredicted RBP2.33□□□□□ -2.04
HMGB1P25-201ENST00000468402 ZNF846Q147U1 533 aa2.33□□□□□ -2.04
HMGB1P25-201ENST00000468402 CDK5R1Q15078 307 aa2.33□□□□□ -2.04
HMGB1P25-201ENST00000468402 MSMO1Q15800 293 aa2.33□□□□□ -2.04
HMGB1P25-201ENST00000468402 TMEM69Q5SWH9 247 aa2.33□□□□□ -2.04
HMGB1P25-201ENST00000468402 DNLZQ5SXM8 178 aa2.33□□□□□ -2.04
HMGB1P25-201ENST00000468402 AADACL3Q5VUY0 350 aa2.33□□□□□ -2.04
HMGB1P25-201ENST00000468402 FAM104BQ5XKR9 115 aa2.33□□□□□ -2.04
HMGB1P25-201ENST00000468402 UNQ9165/PRO28630Q6UXU0 137 aa2.33□□□□□ -2.04
HMGB1P25-201ENST00000468402 LCA10Q71F78 164 aa2.33□□□□□ -2.04
HMGB1P25-201ENST00000468402 SSX8Q7RTT4 187 aa2.33□□□□□ -2.04
HMGB1P25-201ENST00000468402 AAED1Q7RTV5 226 aa2.33□□□□□ -2.04
HMGB1P25-201ENST00000468402 OR5AS1Q8N127 324 aa2.33□□□□□ -2.04
HMGB1P25-201ENST00000468402 ZNF664Q8N3J9 261 aa2.33□□□□□ -2.04
HMGB1P25-201ENST00000468402 TCTEX1D1Q8N7M0 179 aa2.33□□□□□ -2.04
HMGB1P25-201ENST00000468402 CNEP1R1Q8N9A8 125 aa2.33□□□□□ -2.04
HMGB1P25-201ENST00000468402 OR5C1Q8NGR4 320 aa2.33□□□□□ -2.04
HMGB1P25-201ENST00000468402 OR2T10Q8NGZ9 312 aa2.33□□□□□ -2.04
HMGB1P25-201ENST00000468402 OR5AK2Q8NH90 309 aa2.33□□□□□ -2.04
HMGB1P25-201ENST00000468402 FNDC9Q8TBE3 224 aa2.33□□□□□ -2.04
HMGB1P25-201ENST00000468402 GINS4Q9BRT9 223 aa2.33□□□□□ -2.04
HMGB1P25-201ENST00000468402 PRADC1Q9BSG0 188 aa2.33□□□□□ -2.04
HMGB1P25-201ENST00000468402 LINC00470Q9BZP3 86 aa2.33□□□□□ -2.04
HMGB1P25-201ENST00000468402 LPAR5Q9H1C0 372 aa2.33□□□□□ -2.04
HMGB1P25-201ENST00000468402 BANF2Q9H503 90 aa2.33□□□□□ -2.04
HMGB1P25-201ENST00000468402 ERG28Q9UKR5 140 aa2.33□□□□□ -2.04
HMGB1P25-201ENST00000468402 FUT9Q9Y231 359 aa2.33□□□□□ -2.04
HMGB1P25-201ENST00000468402 PHLDA3Q9Y5J5 127 aa2.33□□□□□ -2.04
HMGB1P25-201ENST00000468402 LHFPL6Q9Y693 200 aa2.33□□□□□ -2.04
HMGB1P25-201ENST00000468402 DSCAML1Q8TD84 2053 aa2.33□□□□□ -2.04
HMGB1P25-201ENST00000468402 LAMA5O15230 3695 aa2.33□□□□□ -2.04
HMGB1P25-201ENST00000468402 NBEAQ8NFP9 2946 aa2.33□□□□□ -2.04
HMGB1P25-201ENST00000468402 SPTBN4Q9H254 2564 aa2.33□□□□□ -2.04
HMGB1P25-201ENST00000468402 CADP27708 2225 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms