RNA–Protein interactions for RNA: ENST00000468267.1

SSBP1-207, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-207ENST00000468267 HMGB3O15347 200 aaKnown RBP11.94□□□□□ -0.5
SSBP1-207ENST00000468267 HOXA5P20719 270 aa11.94□□□□□ -0.5
SSBP1-207ENST00000468267 ATP6V0CP27449 155 aa11.94□□□□□ -0.5
SSBP1-207ENST00000468267 TCL1AP56279 114 aa11.94□□□□□ -0.5
SSBP1-207ENST00000468267 RGS21Q2M5E4 152 aa11.94□□□□□ -0.5
SSBP1-207ENST00000468267 INO80EQ8NBZ0 244 aaPredicted RBP11.94□□□□□ -0.5
SSBP1-207ENST00000468267 TMED6Q8WW62 240 aa11.94□□□□□ -0.5
SSBP1-207ENST00000468267 TP53TG3Q9ULZ0 132 aa11.94□□□□□ -0.5
SSBP1-207ENST00000468267 KLF12Q9Y4X4 402 aa11.94□□□□□ -0.5
SSBP1-207ENST00000468267 LENEPQ9Y5L5 61 aa11.94□□□□□ -0.5
SSBP1-207ENST00000468267 TRAV26-1A0A087WT03 109 aa11.93□□□□□ -0.5
SSBP1-207ENST00000468267 RTL8CO15255 209 aa11.93□□□□□ -0.5
SSBP1-207ENST00000468267 ARL14EPLP0DKL9 152 aa11.93□□□□□ -0.5
SSBP1-207ENST00000468267 CDC34P49427 236 aaPredicted RBP11.93□□□□□ -0.5
SSBP1-207ENST00000468267 SERF2P84101 59 aa11.93□□□□□ -0.5
SSBP1-207ENST00000468267 FAM74A1Q5RGS3 127 aa11.93□□□□□ -0.5
SSBP1-207ENST00000468267 IBA57Q5T440 356 aaKnown RBP11.93□□□□□ -0.5
SSBP1-207ENST00000468267 ARL6IP6Q8N6S5 226 aa11.93□□□□□ -0.5
SSBP1-207ENST00000468267 CMTM2Q8TAZ6 248 aa11.93□□□□□ -0.5
SSBP1-207ENST00000468267 GNPNAT1Q96EK6 184 aaPredicted RBP11.93□□□□□ -0.5
SSBP1-207ENST00000468267 C18orf15Q96N68 181 aa11.93□□□□□ -0.5
SSBP1-207ENST00000468267 TMPRSS5Q9H3S3 457 aa11.93□□□□□ -0.5
SSBP1-207ENST00000468267 TRGV2A0A075B6R0 118 aa11.92□□□□□ -0.5
SSBP1-207ENST00000468267 TRGV1A0A0A0MS02 117 aa11.92□□□□□ -0.5
SSBP1-207ENST00000468267 RNF222A6NCQ9 220 aa11.92□□□□□ -0.5
SSBP1-207ENST00000468267 SPINK4O60575 86 aa11.92□□□□□ -0.5
SSBP1-207ENST00000468267 MBP02144 154 aa11.92□□□□□ -0.5
SSBP1-207ENST00000468267 STAG3L2P0CL84 134 aa11.92□□□□□ -0.5
SSBP1-207ENST00000468267 STAG3L3P0CL85 134 aa11.92□□□□□ -0.5
SSBP1-207ENST00000468267 CCL18P55774 89 aa11.92□□□□□ -0.5
SSBP1-207ENST00000468267 RAB24Q969Q5 203 aa11.92□□□□□ -0.5
SSBP1-207ENST00000468267 TNFSF18Q9UNG2 199 aa11.92□□□□□ -0.5
SSBP1-207ENST00000468267 FXYD6-FXYD2A0A087WZ82 144 aa11.91□□□□□ -0.5
SSBP1-207ENST00000468267 A0A0J9YY99 117 aa11.91□□□□□ -0.5
SSBP1-207ENST00000468267 H3BNG1 76 aa11.91□□□□□ -0.5
SSBP1-207ENST00000468267 Q6AWC8 147 aa11.91□□□□□ -0.5
SSBP1-207ENST00000468267 GOLT1AQ6ZVE7 132 aa11.91□□□□□ -0.5
SSBP1-207ENST00000468267 OR2T35Q8NGX2 323 aa11.91□□□□□ -0.5
SSBP1-207ENST00000468267 SUN5Q8TC36 379 aa11.91□□□□□ -0.5
SSBP1-207ENST00000468267 ARPC5LQ9BPX5 153 aa11.91□□□□□ -0.5
SSBP1-207ENST00000468267 SH3BGRL3Q9H299 93 aa11.91□□□□□ -0.5
SSBP1-207ENST00000468267 RPH3ALQ9UNE2 315 aa11.91□□□□□ -0.5
SSBP1-207ENST00000468267 RPL7L1Q6DKI1 246 aaKnown RBP11.9□□□□□ -0.5
SSBP1-207ENST00000468267 ZNRF2Q8NHG8 242 aa11.9□□□□□ -0.5
SSBP1-207ENST00000468267 LINC00588Q9Y4M8 146 aa11.9□□□□□ -0.5
SSBP1-207ENST00000468267 BORCS7-ASMTA0A0B4J1R7 106 aa11.89□□□□□ -0.51
SSBP1-207ENST00000468267 GCHFRP30047 84 aa11.89□□□□□ -0.51
SSBP1-207ENST00000468267 MUC21Q5SSG8 566 aa11.89□□□□□ -0.51
SSBP1-207ENST00000468267 ST6GAL2Q96JF0 529 aa11.89□□□□□ -0.51
SSBP1-207ENST00000468267 PRSS29PA6NIE9 313 aa11.88□□□□□ -0.51
SSBP1-207ENST00000468267 G3V3Q6 166 aa11.88□□□□□ -0.51
SSBP1-207ENST00000468267 GNG5P63218 68 aa11.88□□□□□ -0.51
SSBP1-207ENST00000468267 ZNF415Q09FC8 603 aa11.88□□□□□ -0.51
SSBP1-207ENST00000468267 SSX7Q7RTT5 188 aa11.88□□□□□ -0.51
SSBP1-207ENST00000468267 ACTR3CQ9C0K3 210 aaPredicted RBP11.88□□□□□ -0.51
SSBP1-207ENST00000468267 TRAV8-1A0A0A6YYK1 113 aa11.87□□□□□ -0.51
SSBP1-207ENST00000468267 A0A1B0GVY2 172 aa11.87□□□□□ -0.51
SSBP1-207ENST00000468267 CXorf1O96002 111 aa11.87□□□□□ -0.51
SSBP1-207ENST00000468267 C1orf134Q5TEV5 83 aa11.87□□□□□ -0.51
SSBP1-207ENST00000468267 FAM159AQ6UWV7 190 aa11.87□□□□□ -0.51
SSBP1-207ENST00000468267 TVP23CQ96ET8 276 aa11.87□□□□□ -0.51
SSBP1-207ENST00000468267 VSIG2Q96IQ7 327 aa11.87□□□□□ -0.51
SSBP1-207ENST00000468267 TMEM167BQ9NRX6 74 aa11.87□□□□□ -0.51
SSBP1-207ENST00000468267 MRPL16Q9NX20 251 aaKnown RBP11.87□□□□□ -0.51
SSBP1-207ENST00000468267 MDFICQ9P1T7 246 aa11.87□□□□□ -0.51
SSBP1-207ENST00000468267 NBDYA0A0U1RRE5 68 aa11.86□□□□□ -0.51
SSBP1-207ENST00000468267 TMEM183BQ1AE95 376 aa11.86□□□□□ -0.51
SSBP1-207ENST00000468267 TDRG1Q3Y452 100 aa11.86□□□□□ -0.51
SSBP1-207ENST00000468267 SOHLH1Q5JUK2 328 aa11.86□□□□□ -0.51
SSBP1-207ENST00000468267 TMEM183AQ8IXX5 376 aa11.86□□□□□ -0.51
SSBP1-207ENST00000468267 C5orf17Q8NAS9 161 aa11.86□□□□□ -0.51
SSBP1-207ENST00000468267 TREM1Q9NP99 234 aa11.86□□□□□ -0.51
SSBP1-207ENST00000468267 DYNC1H1Q14204 4646 aaKnown RBP11.85□□□□□ -0.51
SSBP1-207ENST00000468267 TRGV11A0A075B6L2 103 aa11.85□□□□□ -0.51
SSBP1-207ENST00000468267 SERTM2A0A1B0GWG4 89 aa11.85□□□□□ -0.51
SSBP1-207ENST00000468267 ESRGQ1W209 222 aa11.85□□□□□ -0.51
SSBP1-207ENST00000468267 SPXQ9BT56 116 aa11.85□□□□□ -0.51
SSBP1-207ENST00000468267 DNAH11Q96DT5 4516 aa11.85□□□□□ -0.51
SSBP1-207ENST00000468267 TRAV21A0A0B4J279 112 aa11.84□□□□□ -0.51
SSBP1-207ENST00000468267 TAAR5O14804 337 aa11.84□□□□□ -0.51
SSBP1-207ENST00000468267 IGHV3-53P01767 116 aa11.84□□□□□ -0.51
SSBP1-207ENST00000468267 TCRAP04437 139 aa11.84□□□□□ -0.51
SSBP1-207ENST00000468267 SUMO1P63165 101 aaKnown RBP11.84□□□□□ -0.51
SSBP1-207ENST00000468267 Q9H8V8 135 aa11.84□□□□□ -0.51
SSBP1-207ENST00000468267 NAGKQ9UJ70 344 aa11.84□□□□□ -0.51
SSBP1-207ENST00000468267 HERC2O95714 4834 aa11.83□□□□□ -0.52
SSBP1-207ENST00000468267 A0A096LPF7 62 aa11.83□□□□□ -0.52
SSBP1-207ENST00000468267 GGTLC3B5MD39 225 aa11.83□□□□□ -0.52
SSBP1-207ENST00000468267 F6UZH7 168 aa11.83□□□□□ -0.52
SSBP1-207ENST00000468267 K7EQM0 130 aa11.83□□□□□ -0.52
SSBP1-207ENST00000468267 ZNF726P1Q15940 193 aa11.83□□□□□ -0.52
SSBP1-207ENST00000468267 RASL10AQ92737 203 aa11.83□□□□□ -0.52
SSBP1-207ENST00000468267 SGK494Q96LW2 274 aa11.83□□□□□ -0.52
SSBP1-207ENST00000468267 CYTL1Q9NRR1 136 aa11.83□□□□□ -0.52
SSBP1-207ENST00000468267 EPDR1Q9UM22 224 aa11.83□□□□□ -0.52
SSBP1-207ENST00000468267 CTXND1A0A1B0GTU2 59 aa11.82□□□□□ -0.52
SSBP1-207ENST00000468267 A0A1W2PRE2 83 aa11.82□□□□□ -0.52
SSBP1-207ENST00000468267 ARPC5O15511 151 aa11.82□□□□□ -0.52
SSBP1-207ENST00000468267 PAX4O43316 350 aa11.82□□□□□ -0.52
SSBP1-207ENST00000468267 GNRH2O43555 120 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms