RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 RBMY1CP0DJD4 496 aa11.59□□□□□ -0.55
GPC1-207ENST00000466624 MIFP14174 115 aa11.59□□□□□ -0.55
GPC1-207ENST00000466624 RAB14P61106 215 aa11.59□□□□□ -0.55
GPC1-207ENST00000466624 RBMY1FQ15415 496 aaKnown RBP11.59□□□□□ -0.55
GPC1-207ENST00000466624 PRNTQ86SH4 94 aa11.59□□□□□ -0.55
GPC1-207ENST00000466624 TVP23CQ96ET8 276 aa11.59□□□□□ -0.55
GPC1-207ENST00000466624 SGK494Q96LW2 274 aa11.59□□□□□ -0.55
GPC1-207ENST00000466624 NIPSNAP3BQ9BS92 247 aa11.59□□□□□ -0.55
GPC1-207ENST00000466624 TREM1Q9NP99 234 aa11.59□□□□□ -0.55
GPC1-207ENST00000466624 ZFP30Q9Y2G7 519 aa11.59□□□□□ -0.55
GPC1-207ENST00000466624 TRAV34A0A0B4J273 112 aa11.58□□□□□ -0.56
GPC1-207ENST00000466624 J3KRW8 73 aa11.58□□□□□ -0.56
GPC1-207ENST00000466624 ZNF324O75467 553 aaPredicted RBP11.58□□□□□ -0.56
GPC1-207ENST00000466624 BTN1A1Q13410 526 aa11.58□□□□□ -0.56
GPC1-207ENST00000466624 PRR9Q5T870 116 aa11.58□□□□□ -0.56
GPC1-207ENST00000466624 Q6AWC8 147 aa11.58□□□□□ -0.56
GPC1-207ENST00000466624 COX8CQ7Z4L0 72 aa11.58□□□□□ -0.56
GPC1-207ENST00000466624 PCNPQ8WW12 178 aaKnown RBP11.58□□□□□ -0.56
GPC1-207ENST00000466624 TMEM208Q9BTX3 173 aa11.58□□□□□ -0.56
GPC1-207ENST00000466624 TRAV12-3A0A0B4J271 114 aa11.57□□□□□ -0.56
GPC1-207ENST00000466624 TMEM250H0YL14 139 aa11.57□□□□□ -0.56
GPC1-207ENST00000466624 LTAP01374 205 aa11.57□□□□□ -0.56
GPC1-207ENST00000466624 RNASE4P34096 147 aaKnown RBP11.57□□□□□ -0.56
GPC1-207ENST00000466624 TAS2R60P59551 318 aa11.57□□□□□ -0.56
GPC1-207ENST00000466624 TOR2AQ5JU69 321 aa11.57□□□□□ -0.56
GPC1-207ENST00000466624 CLLU1Q5K131 121 aa11.57□□□□□ -0.56
GPC1-207ENST00000466624 PYGO2Q9BRQ0 406 aa11.57□□□□□ -0.56
GPC1-207ENST00000466624 LINC00467Q9BRT7 94 aa11.57□□□□□ -0.56
GPC1-207ENST00000466624 C11orf68Q9H3H3 251 aaKnown RBP11.57□□□□□ -0.56
GPC1-207ENST00000466624 IGHV3OR16-12A0A075B7B8 117 aa11.56□□□□□ -0.56
GPC1-207ENST00000466624 SMUG1Q53HV7 270 aa11.56□□□□□ -0.56
GPC1-207ENST00000466624 Q8NAQ8 132 aa11.56□□□□□ -0.56
GPC1-207ENST00000466624 LINC01587Q99440 93 aa11.56□□□□□ -0.56
GPC1-207ENST00000466624 EIF5A2Q9GZV4 153 aaKnown RBP11.56□□□□□ -0.56
GPC1-207ENST00000466624 TGP01266 2768 aa11.55□□□□□ -0.56
GPC1-207ENST00000466624 TRAV21A0A0B4J279 112 aa11.55□□□□□ -0.56
GPC1-207ENST00000466624 RPL35P42766 123 aaKnown RBP11.55□□□□□ -0.56
GPC1-207ENST00000466624 RRN3P1Q2M238 152 aa11.55□□□□□ -0.56
GPC1-207ENST00000466624 C8orf49Q96NF6 230 aa11.55□□□□□ -0.56
GPC1-207ENST00000466624 SMDT1Q9H4I9 107 aa11.55□□□□□ -0.56
GPC1-207ENST00000466624 MED9Q9NWA0 146 aa11.55□□□□□ -0.56
GPC1-207ENST00000466624 STAB2Q8WWQ8 2551 aa11.54□□□□□ -0.56
GPC1-207ENST00000466624 IGHV4-28A0A0C4DH34 117 aa11.54□□□□□ -0.56
GPC1-207ENST00000466624 TMEM189A5PLL7 270 aa11.54□□□□□ -0.56
GPC1-207ENST00000466624 RGS13O14921 159 aa11.54□□□□□ -0.56
GPC1-207ENST00000466624 TMEM183AQ8IXX5 376 aa11.54□□□□□ -0.56
GPC1-207ENST00000466624 SMIM12Q96EX1 92 aa11.54□□□□□ -0.56
GPC1-207ENST00000466624 DERL1Q9BUN8 251 aa11.54□□□□□ -0.56
GPC1-207ENST00000466624 GCGP01275 180 aa11.53□□□□□ -0.56
GPC1-207ENST00000466624 PFN1P07737 140 aaKnown RBP11.53□□□□□ -0.56
GPC1-207ENST00000466624 ZNF493Q6ZR52 646 aa11.53□□□□□ -0.56
GPC1-207ENST00000466624 BAGE2Q86Y30 109 aa11.53□□□□□ -0.56
GPC1-207ENST00000466624 MLST8Q9BVC4 326 aa11.53□□□□□ -0.56
GPC1-207ENST00000466624 EDA2RQ9HAV5 297 aa11.53□□□□□ -0.56
GPC1-207ENST00000466624 IGHV1OR15-1A0A075B7D0 117 aa11.52□□□□□ -0.57
GPC1-207ENST00000466624 ZNF705GA8MUZ8 300 aaPredicted RBP11.52□□□□□ -0.57
GPC1-207ENST00000466624 ZNF80P51504 273 aaPredicted RBP11.52□□□□□ -0.57
GPC1-207ENST00000466624 TDRG1Q3Y452 100 aa11.52□□□□□ -0.57
GPC1-207ENST00000466624 ANXA2RQ3ZCQ2 193 aa11.52□□□□□ -0.57
GPC1-207ENST00000466624 EIF4E3Q8N5X7 224 aaKnown RBP11.52□□□□□ -0.57
GPC1-207ENST00000466624 TMEM263Q8WUH6 116 aaKnown RBP11.52□□□□□ -0.57
GPC1-207ENST00000466624 C16orf74Q96GX8 76 aa11.52□□□□□ -0.57
GPC1-207ENST00000466624 A0A0J9YWU9 116 aa11.51□□□□□ -0.57
GPC1-207ENST00000466624 C9JCJ5 164 aa11.51□□□□□ -0.57
GPC1-207ENST00000466624 SRP19P09132 144 aaKnown RBP11.51□□□□□ -0.57
GPC1-207ENST00000466624 PEA15Q15121 130 aa11.51□□□□□ -0.57
GPC1-207ENST00000466624 CENPWQ5EE01 88 aa11.51□□□□□ -0.57
GPC1-207ENST00000466624 RNASE8Q8TDE3 154 aaKnown RBP11.51□□□□□ -0.57
GPC1-207ENST00000466624 ZC2HC1AQ96GY0 325 aa11.51□□□□□ -0.57
GPC1-207ENST00000466624 FABP5P3A8MUU1 101 aa11.5□□□□□ -0.57
GPC1-207ENST00000466624 AZU1P20160 251 aa11.5□□□□□ -0.57
GPC1-207ENST00000466624 GNG4P50150 75 aa11.5□□□□□ -0.57
GPC1-207ENST00000466624 ZNF674Q2M3X9 581 aa11.5□□□□□ -0.57
GPC1-207ENST00000466624 FAM159AQ6UWV7 190 aa11.5□□□□□ -0.57
GPC1-207ENST00000466624 Q6ZQT7 251 aa11.5□□□□□ -0.57
GPC1-207ENST00000466624 KCNS1Q96KK3 526 aa11.5□□□□□ -0.57
GPC1-207ENST00000466624 PARLQ9H300 379 aa11.5□□□□□ -0.57
GPC1-207ENST00000466624 TRBV20OR9-2A0A075B6H5 130 aa11.49□□□□□ -0.57
GPC1-207ENST00000466624 RAB19A4D1S5 217 aa11.49□□□□□ -0.57
GPC1-207ENST00000466624 IGLV2-8P01709 118 aa11.49□□□□□ -0.57
GPC1-207ENST00000466624 HTN1P15515 57 aa11.49□□□□□ -0.57
GPC1-207ENST00000466624 IBA57Q5T440 356 aaKnown RBP11.49□□□□□ -0.57
GPC1-207ENST00000466624 FAM162BQ5T6X4 162 aa11.49□□□□□ -0.57
GPC1-207ENST00000466624 TEX48A0A1B0GUV7 120 aa11.48□□□□□ -0.57
GPC1-207ENST00000466624 PLAC8L1A1L4L8 177 aa11.48□□□□□ -0.57
GPC1-207ENST00000466624 CBY3A6NI87 242 aa11.48□□□□□ -0.57
GPC1-207ENST00000466624 PRM2P04554 102 aa11.48□□□□□ -0.57
GPC1-207ENST00000466624 CRIP1P50238 77 aa11.48□□□□□ -0.57
GPC1-207ENST00000466624 MUC21Q5SSG8 566 aa11.48□□□□□ -0.57
GPC1-207ENST00000466624 NHLRC2Q8NBF2 726 aa11.48□□□□□ -0.57
GPC1-207ENST00000466624 TRGV11A0A075B6L2 103 aa11.47□□□□□ -0.57
GPC1-207ENST00000466624 DEFB4AO15263 64 aa11.47□□□□□ -0.57
GPC1-207ENST00000466624 SH2D1AO60880 128 aa11.47□□□□□ -0.57
GPC1-207ENST00000466624 SRSF3P84103 164 aaKnown RBP11.47□□□□□ -0.57
GPC1-207ENST00000466624 C11orf72Q8NBR9 251 aa11.47□□□□□ -0.57
GPC1-207ENST00000466624 SDF2L1Q9HCN8 221 aa11.47□□□□□ -0.57
GPC1-207ENST00000466624 BIN3Q9NQY0 253 aa11.47□□□□□ -0.57
GPC1-207ENST00000466624 C11orf21Q9P2W6 132 aa11.47□□□□□ -0.57
GPC1-207ENST00000466624 TP53TG3Q9ULZ0 132 aa11.47□□□□□ -0.57
GPC1-207ENST00000466624 LY96Q9Y6Y9 160 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms