RNA–Protein interactions for RNA: ENST00000466579.1

SDCCAG3-208, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best)

Gene SDCCAG3, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-208ENST00000466579 TPT1P13693 172 aaKnown RBP6.73□□□□□ -1.33
SDCCAG3-208ENST00000466579 EMP1P54849 157 aa6.73□□□□□ -1.33
SDCCAG3-208ENST00000466579 ANXA2RQ3ZCQ2 193 aa6.73□□□□□ -1.33
SDCCAG3-208ENST00000466579 Q6AWC8 147 aa6.73□□□□□ -1.33
SDCCAG3-208ENST00000466579 GOLT1AQ6ZVE7 132 aa6.73□□□□□ -1.33
SDCCAG3-208ENST00000466579 Q8TAT8 98 aa6.73□□□□□ -1.33
SDCCAG3-208ENST00000466579 NKX6-2Q9C056 277 aaPredicted RBP6.73□□□□□ -1.33
SDCCAG3-208ENST00000466579 MAP1LC3BQ9GZQ8 125 aa6.73□□□□□ -1.33
SDCCAG3-208ENST00000466579 TMPRSS5Q9H3S3 457 aa6.73□□□□□ -1.33
SDCCAG3-208ENST00000466579 EPDR1Q9UM22 224 aa6.73□□□□□ -1.33
SDCCAG3-208ENST00000466579 DEFB131BA0A096LNP1 70 aa6.72□□□□□ -1.33
SDCCAG3-208ENST00000466579 FBLL1A6NHQ2 334 aaKnown RBP6.72□□□□□ -1.33
SDCCAG3-208ENST00000466579 FAM74A7A6NL05 159 aa6.72□□□□□ -1.33
SDCCAG3-208ENST00000466579 J3KRW8 73 aa6.72□□□□□ -1.33
SDCCAG3-208ENST00000466579 J3QL48 77 aa6.72□□□□□ -1.33
SDCCAG3-208ENST00000466579 IGLV2-11P01706 119 aa6.72□□□□□ -1.33
SDCCAG3-208ENST00000466579 RNASE4P34096 147 aaKnown RBP6.72□□□□□ -1.33
SDCCAG3-208ENST00000466579 FHITP49789 147 aa6.72□□□□□ -1.33
SDCCAG3-208ENST00000466579 SUMO1P63165 101 aaKnown RBP6.72□□□□□ -1.33
SDCCAG3-208ENST00000466579 GNG5P63218 68 aa6.72□□□□□ -1.33
SDCCAG3-208ENST00000466579 DAZ2Q13117 558 aaKnown RBP6.72□□□□□ -1.33
SDCCAG3-208ENST00000466579 ZNF767PQ75MW2 155 aa6.72□□□□□ -1.33
SDCCAG3-208ENST00000466579 CCDC28AQ8IWP9 274 aa6.72□□□□□ -1.33
SDCCAG3-208ENST00000466579 EIF4E3Q8N5X7 224 aaKnown RBP6.72□□□□□ -1.33
SDCCAG3-208ENST00000466579 C11orf72Q8NBR9 251 aa6.72□□□□□ -1.33
SDCCAG3-208ENST00000466579 TVP23CQ96ET8 276 aa6.72□□□□□ -1.33
SDCCAG3-208ENST00000466579 FAM210BQ96KR6 192 aa6.72□□□□□ -1.33
SDCCAG3-208ENST00000466579 ATG101Q9BSB4 218 aa6.72□□□□□ -1.33
SDCCAG3-208ENST00000466579 APLNQ9ULZ1 77 aa6.72□□□□□ -1.33
SDCCAG3-208ENST00000466579 TIMM8BQ9Y5J9 83 aaPredicted RBP6.72□□□□□ -1.33
SDCCAG3-208ENST00000466579 KMT2AQ03164 3969 aa6.72□□□□□ -1.33
SDCCAG3-208ENST00000466579 hCG_2014768A0A024R1R8 64 aa6.71□□□□□ -1.34
SDCCAG3-208ENST00000466579 TRAV8-1A0A0A6YYK1 113 aa6.71□□□□□ -1.34
SDCCAG3-208ENST00000466579 A0A1B0GVG6 124 aa6.71□□□□□ -1.34
SDCCAG3-208ENST00000466579 RAB5CP51148 216 aa6.71□□□□□ -1.34
SDCCAG3-208ENST00000466579 FGF8P55075 233 aaPredicted RBP6.71□□□□□ -1.34
SDCCAG3-208ENST00000466579 TDRG1Q3Y452 100 aa6.71□□□□□ -1.34
SDCCAG3-208ENST00000466579 IBA57Q5T440 356 aaKnown RBP6.71□□□□□ -1.34
SDCCAG3-208ENST00000466579 EIF5AL1Q6IS14 154 aaKnown RBP6.71□□□□□ -1.34
SDCCAG3-208ENST00000466579 Q6ZQT7 251 aa6.71□□□□□ -1.34
SDCCAG3-208ENST00000466579 SLC51BQ86UW2 128 aa6.71□□□□□ -1.34
SDCCAG3-208ENST00000466579 C9orf62Q8N4C0 152 aa6.71□□□□□ -1.34
SDCCAG3-208ENST00000466579 CYB561D1Q8N8Q1 229 aa6.71□□□□□ -1.34
SDCCAG3-208ENST00000466579 TMEM75Q8N9X5 138 aa6.71□□□□□ -1.34
SDCCAG3-208ENST00000466579 ZNF680Q8NEM1 530 aa6.71□□□□□ -1.34
SDCCAG3-208ENST00000466579 LINC00476Q8WZB0 136 aa6.71□□□□□ -1.34
SDCCAG3-208ENST00000466579 TCEAL7Q9BRU2 100 aa6.71□□□□□ -1.34
SDCCAG3-208ENST00000466579 TP53TG3Q9ULZ0 132 aa6.71□□□□□ -1.34
SDCCAG3-208ENST00000466579 IGHV1OR15-1A0A075B7D0 117 aa6.7□□□□□ -1.34
SDCCAG3-208ENST00000466579 TRAV1-1A0A0B4J248 108 aa6.7□□□□□ -1.34
SDCCAG3-208ENST00000466579 CBY3A6NI87 242 aa6.7□□□□□ -1.34
SDCCAG3-208ENST00000466579 K7EQM0 130 aa6.7□□□□□ -1.34
SDCCAG3-208ENST00000466579 HTN1P15515 57 aa6.7□□□□□ -1.34
SDCCAG3-208ENST00000466579 LORP23490 312 aaPredicted RBP6.7□□□□□ -1.34
SDCCAG3-208ENST00000466579 DAD1P61803 113 aa6.7□□□□□ -1.34
SDCCAG3-208ENST00000466579 LGALS9CQ6DKI2 356 aa6.7□□□□□ -1.34
SDCCAG3-208ENST00000466579 FAM213BQ8TBF2 198 aa6.7□□□□□ -1.34
SDCCAG3-208ENST00000466579 HIST1H2BAQ96A08 127 aa6.7□□□□□ -1.34
SDCCAG3-208ENST00000466579 C18orf15Q96N68 181 aa6.7□□□□□ -1.34
SDCCAG3-208ENST00000466579 RPH3ALQ9UNE2 315 aa6.7□□□□□ -1.34
SDCCAG3-208ENST00000466579 PSG8Q9UQ74 426 aa6.7□□□□□ -1.34
SDCCAG3-208ENST00000466579 IGHV4-4A0A075B6R2 117 aa6.69□□□□□ -1.34
SDCCAG3-208ENST00000466579 TRBV6-1A0A0K0K1D8 114 aa6.69□□□□□ -1.34
SDCCAG3-208ENST00000466579 IGLL5B9A064 214 aa6.69□□□□□ -1.34
SDCCAG3-208ENST00000466579 PEX7O00628 323 aa6.69□□□□□ -1.34
SDCCAG3-208ENST00000466579 RGS13O14921 159 aa6.69□□□□□ -1.34
SDCCAG3-208ENST00000466579 SULT1A2P50226 295 aa6.69□□□□□ -1.34
SDCCAG3-208ENST00000466579 TCL1AP56279 114 aa6.69□□□□□ -1.34
SDCCAG3-208ENST00000466579 UBE2G2P60604 165 aa6.69□□□□□ -1.34
SDCCAG3-208ENST00000466579 FLI1Q01543 452 aaPredicted RBP6.69□□□□□ -1.34
SDCCAG3-208ENST00000466579 COX8CQ7Z4L0 72 aa6.69□□□□□ -1.34
SDCCAG3-208ENST00000466579 IQCF2Q8IXL9 164 aa6.69□□□□□ -1.34
SDCCAG3-208ENST00000466579 SFT2D1Q8WV19 159 aa6.69□□□□□ -1.34
SDCCAG3-208ENST00000466579 TREM1Q9NP99 234 aa6.69□□□□□ -1.34
SDCCAG3-208ENST00000466579 NOP10Q9NPE3 64 aaKnown RBP6.69□□□□□ -1.34
SDCCAG3-208ENST00000466579 KLF12Q9Y4X4 402 aa6.69□□□□□ -1.34
SDCCAG3-208ENST00000466579 TRAV21A0A0B4J279 112 aa6.68□□□□□ -1.34
SDCCAG3-208ENST00000466579 SNURFLB1AK76 121 aa6.68□□□□□ -1.34
SDCCAG3-208ENST00000466579 SPINK4O60575 86 aa6.68□□□□□ -1.34
SDCCAG3-208ENST00000466579 H2AFB1P0C5Y9 115 aa6.68□□□□□ -1.34
SDCCAG3-208ENST00000466579 DEFB130BP0DP73 79 aa6.68□□□□□ -1.34
SDCCAG3-208ENST00000466579 DEFB130AP0DP74 79 aa6.68□□□□□ -1.34
SDCCAG3-208ENST00000466579 PPT1P50897 306 aa6.68□□□□□ -1.34
SDCCAG3-208ENST00000466579 LGALS9BQ3B8N2 356 aa6.68□□□□□ -1.34
SDCCAG3-208ENST00000466579 ZFP69Q49AA0 526 aa6.68□□□□□ -1.34
SDCCAG3-208ENST00000466579 SAPCD1Q5SSQ6 148 aa6.68□□□□□ -1.34
SDCCAG3-208ENST00000466579 NDFIP1Q9BT67 221 aa6.68□□□□□ -1.34
SDCCAG3-208ENST00000466579 GSN-AS1Q9NRJ2 163 aa6.68□□□□□ -1.34
SDCCAG3-208ENST00000466579 PAGE4O60829 102 aa6.67□□□□□ -1.34
SDCCAG3-208ENST00000466579 IFNA7P01567 189 aa6.67□□□□□ -1.34
SDCCAG3-208ENST00000466579 ATP5G1P05496 136 aa6.67□□□□□ -1.34
SDCCAG3-208ENST00000466579 ATP5G3P48201 142 aa6.67□□□□□ -1.34
SDCCAG3-208ENST00000466579 ZNF80P51504 273 aaPredicted RBP6.67□□□□□ -1.34
SDCCAG3-208ENST00000466579 SGK494Q96LW2 274 aa6.67□□□□□ -1.34
SDCCAG3-208ENST00000466579 LINC00479Q96M42 142 aa6.67□□□□□ -1.34
SDCCAG3-208ENST00000466579 C8orf49Q96NF6 230 aa6.67□□□□□ -1.34
SDCCAG3-208ENST00000466579 NDUFAF3Q9BU61 184 aa6.67□□□□□ -1.34
SDCCAG3-208ENST00000466579 TRGV11A0A075B6L2 103 aa6.66□□□□□ -1.34
SDCCAG3-208ENST00000466579 TRAV34A0A0B4J273 112 aa6.66□□□□□ -1.34
SDCCAG3-208ENST00000466579 F6UZH7 168 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 113 ms