RNA–Protein interactions for RNA: ENST00000465655.2

RPL39P28-201, Transcript of ribosomal protein L39 pseudogene 28, humanhuman

BASIC

Gene RPL39P28, Length 155 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P28-201ENST00000465655 DNAL4O96015 105 aa0.69□□□□□ -2.3
RPL39P28-201ENST00000465655 IGKV1D-33P01593 117 aa0.69□□□□□ -2.3
RPL39P28-201ENST00000465655 IGKV1-33P01594 117 aa0.69□□□□□ -2.3
RPL39P28-201ENST00000465655 IGKV1-5P01602 117 aa0.69□□□□□ -2.3
RPL39P28-201ENST00000465655 PRB2P02812 416 aaPredicted RBP0.69□□□□□ -2.3
RPL39P28-201ENST00000465655 PRB1P04280 392 aa0.69□□□□□ -2.3
RPL39P28-201ENST00000465655 CCKP06307 115 aa0.69□□□□□ -2.3
RPL39P28-201ENST00000465655 PRSS2P07478 247 aa0.69□□□□□ -2.3
RPL39P28-201ENST00000465655 COX6CP09669 75 aa0.69□□□□□ -2.3
RPL39P28-201ENST00000465655 CFC1BP0CG36 223 aa0.69□□□□□ -2.3
RPL39P28-201ENST00000465655 CFC1P0CG37 223 aa0.69□□□□□ -2.3
RPL39P28-201ENST00000465655 ARL14EPLP0DKL9 152 aa0.69□□□□□ -2.3
RPL39P28-201ENST00000465655 IGKV1-13P0DP09 117 aa0.69□□□□□ -2.3
RPL39P28-201ENST00000465655 GYPEP15421 78 aa0.69□□□□□ -2.3
RPL39P28-201ENST00000465655 ZNF22P17026 224 aaPredicted RBP0.69□□□□□ -2.3
RPL39P28-201ENST00000465655 CA6P23280 308 aa0.69□□□□□ -2.3
RPL39P28-201ENST00000465655 NPPCP23582 126 aa0.69□□□□□ -2.3
RPL39P28-201ENST00000465655 COL8A2P25067 703 aa0.69□□□□□ -2.3
RPL39P28-201ENST00000465655 LMO2P25791 158 aa0.69□□□□□ -2.3
RPL39P28-201ENST00000465655 RPS27P42677 84 aaKnown RBP0.69□□□□□ -2.3
RPL39P28-201ENST00000465655 CRIP2P52943 208 aaPredicted RBP0.69□□□□□ -2.3
RPL39P28-201ENST00000465655 LINC00313P59037 77 aa0.69□□□□□ -2.3
RPL39P28-201ENST00000465655 B3GALT5-AS1P59052 145 aa0.69□□□□□ -2.3
RPL39P28-201ENST00000465655 UBE2D3P61077 147 aa0.69□□□□□ -2.3
RPL39P28-201ENST00000465655 FGF12P61328 243 aa0.69□□□□□ -2.3
RPL39P28-201ENST00000465655 UBE2D2P62837 147 aa0.69□□□□□ -2.3
RPL39P28-201ENST00000465655 CXCL6P80162 114 aa0.69□□□□□ -2.3
RPL39P28-201ENST00000465655 MRPS36P82909 103 aaKnown RBP0.69□□□□□ -2.3
RPL39P28-201ENST00000465655 HOXA4Q00056 320 aaPredicted RBP0.69□□□□□ -2.3
RPL39P28-201ENST00000465655 BSPH1Q075Z2 132 aa0.69□□□□□ -2.3
RPL39P28-201ENST00000465655 RIGQ13278 110 aa0.69□□□□□ -2.3
RPL39P28-201ENST00000465655 NUMA1Q14980 2115 aa0.69□□□□□ -2.3
RPL39P28-201ENST00000465655 PLGLAQ15195 96 aa0.69□□□□□ -2.3
RPL39P28-201ENST00000465655 MSMPQ1L6U9 139 aa0.69□□□□□ -2.3
RPL39P28-201ENST00000465655 ESRGQ1W209 222 aa0.69□□□□□ -2.3
RPL39P28-201ENST00000465655 TMEM30BQ3MIR4 351 aa0.69□□□□□ -2.3
RPL39P28-201ENST00000465655 SPINK9Q5DT21 86 aa0.69□□□□□ -2.3
RPL39P28-201ENST00000465655 PSMG4Q5JS54 123 aa0.69□□□□□ -2.3
RPL39P28-201ENST00000465655 SP5Q6BEB4 398 aaPredicted RBP0.69□□□□□ -2.3
RPL39P28-201ENST00000465655 PVRIGQ6DKI7 326 aa0.69□□□□□ -2.3
RPL39P28-201ENST00000465655 Q6JHZ5 121 aa0.69□□□□□ -2.3
RPL39P28-201ENST00000465655 GUSBP11Q6P575 273 aa0.69□□□□□ -2.3
RPL39P28-201ENST00000465655 IGFL3Q6UXB1 125 aa0.69□□□□□ -2.3
RPL39P28-201ENST00000465655 C7orf65Q6ZTY9 151 aa0.69□□□□□ -2.3
RPL39P28-201ENST00000465655 FOXL2NBQ6ZUU3 175 aa0.69□□□□□ -2.3
RPL39P28-201ENST00000465655 ZNF329Q86UD4 541 aa0.69□□□□□ -2.3
RPL39P28-201ENST00000465655 NDUFA11Q86Y39 141 aa0.69□□□□□ -2.3
RPL39P28-201ENST00000465655 GPHB5Q86YW7 130 aa0.69□□□□□ -2.3
RPL39P28-201ENST00000465655 ODF3L1Q8IXM7 274 aa0.69□□□□□ -2.3
RPL39P28-201ENST00000465655 ZNF295-AS1Q8N0V1 137 aa0.69□□□□□ -2.3
RPL39P28-201ENST00000465655 DYNAPQ8N1N2 210 aa0.69□□□□□ -2.3
RPL39P28-201ENST00000465655 ZNF843Q8N446 348 aa0.69□□□□□ -2.3
RPL39P28-201ENST00000465655 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP0.69□□□□□ -2.3
RPL39P28-201ENST00000465655 MAPKAPK5-AS1Q8N8E1 139 aa0.69□□□□□ -2.3
RPL39P28-201ENST00000465655 DAND5Q8N907 189 aa0.69□□□□□ -2.3
RPL39P28-201ENST00000465655 NRACQ8N912 160 aa0.69□□□□□ -2.3
RPL39P28-201ENST00000465655 UBALD1Q8TB05 177 aa0.69□□□□□ -2.3
RPL39P28-201ENST00000465655 PIFOQ8TCI5 191 aa0.69□□□□□ -2.3
RPL39P28-201ENST00000465655 SMCR5Q8TEV8 140 aa0.69□□□□□ -2.3
RPL39P28-201ENST00000465655 DYNLRB2Q8TF09 96 aa0.69□□□□□ -2.3
RPL39P28-201ENST00000465655 FAM168AQ92567 244 aa0.69□□□□□ -2.3
RPL39P28-201ENST00000465655 ZNF524Q96C55 264 aa0.69□□□□□ -2.3
RPL39P28-201ENST00000465655 ABHD14BQ96IU4 210 aa0.69□□□□□ -2.3
RPL39P28-201ENST00000465655 Q96M66 194 aa0.69□□□□□ -2.3
RPL39P28-201ENST00000465655 PSMG3-AS1Q96PY0 264 aa0.69□□□□□ -2.3
RPL39P28-201ENST00000465655 CCL13Q99616 98 aa0.69□□□□□ -2.3
RPL39P28-201ENST00000465655 UPK3BQ9BT76 320 aa0.69□□□□□ -2.3
RPL39P28-201ENST00000465655 TIMM21Q9BVV7 248 aa0.69□□□□□ -2.3
RPL39P28-201ENST00000465655 PLA2G12BQ9BX93 195 aa0.69□□□□□ -2.3
RPL39P28-201ENST00000465655 DEFB127Q9H1M4 99 aa0.69□□□□□ -2.3
RPL39P28-201ENST00000465655 C11orf1Q9H5F2 150 aa0.69□□□□□ -2.3
RPL39P28-201ENST00000465655 RPP21Q9H633 154 aaKnown RBP0.69□□□□□ -2.3
RPL39P28-201ENST00000465655 ZNF355PQ9NSJ1 428 aa0.69□□□□□ -2.3
RPL39P28-201ENST00000465655 Q9UFV3 132 aa0.69□□□□□ -2.3
RPL39P28-201ENST00000465655 PRO1854Q9UHT4 67 aa0.69□□□□□ -2.3
RPL39P28-201ENST00000465655 CELA1Q9UNI1 258 aa0.69□□□□□ -2.3
RPL39P28-201ENST00000465655 LINC00588Q9Y4M8 146 aa0.69□□□□□ -2.3
RPL39P28-201ENST00000465655 TMEM14AQ9Y6G1 99 aa0.69□□□□□ -2.3
RPL39P28-201ENST00000465655 LY96Q9Y6Y9 160 aa0.69□□□□□ -2.3
RPL39P28-201ENST00000465655 GREB1Q4ZG55 1949 aa0.69□□□□□ -2.3
RPL39P28-201ENST00000465655 DOCK8Q8NF50 2099 aa0.69□□□□□ -2.3
RPL39P28-201ENST00000465655 TNS1Q9HBL0 1735 aaKnown RBP0.69□□□□□ -2.3
RPL39P28-201ENST00000465655 MGAMO43451 1857 aa0.69□□□□□ -2.3
RPL39P28-201ENST00000465655 RALGAPA1Q6GYQ0 2036 aa0.69□□□□□ -2.3
RPL39P28-201ENST00000465655 TRPM6Q9BX84 2022 aa0.69□□□□□ -2.3
RPL39P28-201ENST00000465655 MYO9BQ13459 2157 aa0.69□□□□□ -2.3
RPL39P28-201ENST00000465655 KCPQ6ZWJ8 1503 aa0.69□□□□□ -2.3
RPL39P28-201ENST00000465655 PLXNB2O15031 1838 aa0.68□□□□□ -2.3
RPL39P28-201ENST00000465655 ARHGAP21Q5T5U3 1957 aa0.68□□□□□ -2.3
RPL39P28-201ENST00000465655 C2orf16Q68DN1 1984 aa0.68□□□□□ -2.3
RPL39P28-201ENST00000465655 EML6Q6ZMW3 1958 aa0.68□□□□□ -2.3
RPL39P28-201ENST00000465655 TANC2Q9HCD6 1990 aa0.68□□□□□ -2.3
RPL39P28-201ENST00000465655 LTBP4Q8N2S1 1624 aa0.68□□□□□ -2.3
RPL39P28-201ENST00000465655 LCTP09848 1927 aa0.68□□□□□ -2.3
RPL39P28-201ENST00000465655 DYSFO75923 2080 aa0.68□□□□□ -2.3
RPL39P28-201ENST00000465655 NUP214P35658 2090 aaPredicted RBP0.68□□□□□ -2.3
RPL39P28-201ENST00000465655 DOCK11Q5JSL3 2073 aa0.68□□□□□ -2.3
RPL39P28-201ENST00000465655 IGKV1-27A0A075B6S5 117 aa0.68□□□□□ -2.3
RPL39P28-201ENST00000465655 TRAV13-2A0A0B4J235 113 aa0.68□□□□□ -2.3
RPL39P28-201ENST00000465655 TRAV12-1A0A0B4J245 112 aa0.68□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms