RNA–Protein interactions for RNA: ENST00000464987.5

TSPAN4-210, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 2,205 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-210ENST00000464987 ORMDL3Q8N138 153 aa14.31□□□□□ -0.12
TSPAN4-210ENST00000464987 STPG4Q8N801 248 aa14.31□□□□□ -0.12
TSPAN4-210ENST00000464987 RNASE8Q8TDE3 154 aaKnown RBP14.31□□□□□ -0.12
TSPAN4-210ENST00000464987 LAMTOR2Q9Y2Q5 125 aa14.31□□□□□ -0.12
TSPAN4-210ENST00000464987 RBAKDNA6NC62 111 aa14.3□□□□□ -0.12
TSPAN4-210ENST00000464987 NPYP01303 97 aa14.3□□□□□ -0.12
TSPAN4-210ENST00000464987 RPS20P60866 119 aaKnown RBP14.3□□□□□ -0.12
TSPAN4-210ENST00000464987 KLK15Q9H2R5 256 aa14.3□□□□□ -0.12
TSPAN4-210ENST00000464987 FAM223BA6NKX1 122 aa14.3□□□□□ -0.12
TSPAN4-210ENST00000464987 FAM223AQ8IWN6 122 aa14.3□□□□□ -0.12
TSPAN4-210ENST00000464987 ZNF747Q9BV97 191 aa14.3□□□□□ -0.12
TSPAN4-210ENST00000464987 LINC01559Q495D7 138 aa14.29□□□□□ -0.12
TSPAN4-210ENST00000464987 C20orf173Q96LM9 149 aa14.29□□□□□ -0.12
TSPAN4-210ENST00000464987 HSPB8Q9UJY1 196 aa14.29□□□□□ -0.12
TSPAN4-210ENST00000464987 IGF1P05019 195 aa14.29□□□□□ -0.12
TSPAN4-210ENST00000464987 GLMPQ8WWB7 406 aa14.29□□□□□ -0.12
TSPAN4-210ENST00000464987 RNF185Q96GF1 192 aa14.29□□□□□ -0.12
TSPAN4-210ENST00000464987 SELENOKQ9Y6D0 94 aa14.29□□□□□ -0.12
TSPAN4-210ENST00000464987 C20orf202A1L168 122 aa14.28□□□□□ -0.12
TSPAN4-210ENST00000464987 NDUFS8O00217 210 aa14.28□□□□□ -0.12
TSPAN4-210ENST00000464987 MSMBP08118 114 aa14.28□□□□□ -0.12
TSPAN4-210ENST00000464987 CKS2P33552 79 aa14.28□□□□□ -0.12
TSPAN4-210ENST00000464987 HINT1P49773 126 aaPredicted RBP14.28□□□□□ -0.12
TSPAN4-210ENST00000464987 SRSF2Q01130 221 aaKnown RBP14.28□□□□□ -0.12
TSPAN4-210ENST00000464987 PET117Q6UWS5 81 aa14.28□□□□□ -0.12
TSPAN4-210ENST00000464987 OR10AG1Q8NH19 301 aa14.28□□□□□ -0.12
TSPAN4-210ENST00000464987 A6NDX4 124 aa14.27□□□□□ -0.12
TSPAN4-210ENST00000464987 K7EP13 123 aa14.27□□□□□ -0.12
TSPAN4-210ENST00000464987 IGHG2P01859 326 aa14.27□□□□□ -0.12
TSPAN4-210ENST00000464987 DEFB1P60022 68 aa14.27□□□□□ -0.12
TSPAN4-210ENST00000464987 PRSS57Q6UWY2 283 aa14.27□□□□□ -0.12
TSPAN4-210ENST00000464987 GPHB5Q86YW7 130 aa14.27□□□□□ -0.12
TSPAN4-210ENST00000464987 TMEM191AQ9H0A3 160 aa14.27□□□□□ -0.12
TSPAN4-210ENST00000464987 MYO18BQ8IUG5 2567 aa14.27□□□□□ -0.12
TSPAN4-210ENST00000464987 FOXE3Q13461 319 aa14.27□□□□□ -0.13
TSPAN4-210ENST00000464987 TMEM78Q5T7P6 136 aa14.27□□□□□ -0.13
TSPAN4-210ENST00000464987 C16orf92Q96LL3 132 aa14.27□□□□□ -0.13
TSPAN4-210ENST00000464987 CNFNQ9BYD5 112 aa14.27□□□□□ -0.13
TSPAN4-210ENST00000464987 LINC01545Q5VT33 79 aa14.26□□□□□ -0.13
TSPAN4-210ENST00000464987 HIF1ANQ9NWT6 349 aa14.26□□□□□ -0.13
TSPAN4-210ENST00000464987 FBN2P35556 2912 aa14.26□□□□□ -0.13
TSPAN4-210ENST00000464987 ZANQ9Y493 2812 aa14.26□□□□□ -0.13
TSPAN4-210ENST00000464987 PRR9Q5T870 116 aa14.26□□□□□ -0.13
TSPAN4-210ENST00000464987 OR8A1Q8NGG7 326 aa14.25□□□□□ -0.13
TSPAN4-210ENST00000464987 MRPS16Q9Y3D3 137 aaKnown RBP14.25□□□□□ -0.13
TSPAN4-210ENST00000464987 C9orf47Q6ZRZ4 202 aa14.25□□□□□ -0.13
TSPAN4-210ENST00000464987 ORAOV1Q8WV07 137 aa14.25□□□□□ -0.13
TSPAN4-210ENST00000464987 J3KRW8 73 aa14.24□□□□□ -0.13
TSPAN4-210ENST00000464987 PF4V1P10720 104 aa14.24□□□□□ -0.13
TSPAN4-210ENST00000464987 GATA1P15976 413 aaPredicted RBP14.24□□□□□ -0.13
TSPAN4-210ENST00000464987 ST20Q9HBF5 79 aa14.24□□□□□ -0.13
TSPAN4-210ENST00000464987 TMEM95Q3KNT9 176 aa14.23□□□□□ -0.13
TSPAN4-210ENST00000464987 Q6ZVH6 145 aa14.23□□□□□ -0.13
TSPAN4-210ENST00000464987 MRPL53Q96EL3 112 aaKnown RBP14.23□□□□□ -0.13
TSPAN4-210ENST00000464987 ATP6V0BQ99437 205 aa14.23□□□□□ -0.13
TSPAN4-210ENST00000464987 ZFYVE26Q68DK2 2539 aa14.23□□□□□ -0.13
TSPAN4-210ENST00000464987 IGHV7-4-1A0A0J9YVY3 117 aa14.23□□□□□ -0.13
TSPAN4-210ENST00000464987 PRB1P04280 392 aa14.23□□□□□ -0.13
TSPAN4-210ENST00000464987 EVI2AP22794 236 aa14.23□□□□□ -0.13
TSPAN4-210ENST00000464987 ANKRD17O75179 2603 aaKnown RBP14.23□□□□□ -0.13
TSPAN4-210ENST00000464987 POLQO75417 2590 aa14.22□□□□□ -0.13
TSPAN4-210ENST00000464987 IGKV3-7A0A075B6H7 116 aa14.22□□□□□ -0.13
TSPAN4-210ENST00000464987 NDUFA4O00483 81 aa14.22□□□□□ -0.13
TSPAN4-210ENST00000464987 CCL25O15444 150 aa14.22□□□□□ -0.13
TSPAN4-210ENST00000464987 EDN2P20800 178 aa14.22□□□□□ -0.13
TSPAN4-210ENST00000464987 HIST1H1AQ02539 215 aaPredicted RBP14.22□□□□□ -0.13
TSPAN4-210ENST00000464987 ZNF738Q8NE65 137 aa14.22□□□□□ -0.13
TSPAN4-210ENST00000464987 OR4X2Q8NGF9 303 aa14.22□□□□□ -0.13
TSPAN4-210ENST00000464987 PTTG1IPP53801 180 aa14.22□□□□□ -0.13
TSPAN4-210ENST00000464987 WFDC3Q8IUB2 231 aa14.22□□□□□ -0.13
TSPAN4-210ENST00000464987 SCRT2Q9NQ03 307 aa14.22□□□□□ -0.13
TSPAN4-210ENST00000464987 FAM208BQ5VWN6 2430 aa14.21□□□□□ -0.13
TSPAN4-210ENST00000464987 USP9YO00507 2555 aaPredicted RBP14.21□□□□□ -0.13
TSPAN4-210ENST00000464987 C9orf139Q6ZV77 190 aa14.21□□□□□ -0.14
TSPAN4-210ENST00000464987 DOPEY2Q9Y3R5 2298 aa14.2□□□□□ -0.14
TSPAN4-210ENST00000464987 HSBP1L1C9JCN9 74 aa14.2□□□□□ -0.14
TSPAN4-210ENST00000464987 SOCS3O14543 225 aa14.2□□□□□ -0.14
TSPAN4-210ENST00000464987 MAPK1IP1LQ8NDC0 245 aa14.2□□□□□ -0.14
TSPAN4-210ENST00000464987 CENPEQ02224 2701 aa14.2□□□□□ -0.14
TSPAN4-210ENST00000464987 CHD6Q8TD26 2715 aa14.2□□□□□ -0.14
TSPAN4-210ENST00000464987 B4DSR2 109 aa14.19□□□□□ -0.14
TSPAN4-210ENST00000464987 SPRY2O43597 315 aa14.19□□□□□ -0.14
TSPAN4-210ENST00000464987 HBDP02042 147 aa14.19□□□□□ -0.14
TSPAN4-210ENST00000464987 TM4SF20Q53R12 229 aa14.19□□□□□ -0.14
TSPAN4-210ENST00000464987 USMG5Q96IX5 58 aa14.19□□□□□ -0.14
TSPAN4-210ENST00000464987 F6UB75 175 aa14.19□□□□□ -0.14
TSPAN4-210ENST00000464987 RPL11P62913 178 aaKnown RBP14.19□□□□□ -0.14
TSPAN4-210ENST00000464987 BBC3Q96PG8 261 aaPredicted RBP14.19□□□□□ -0.14
TSPAN4-210ENST00000464987 NPFFR1Q9GZQ6 430 aa14.19□□□□□ -0.14
TSPAN4-210ENST00000464987 TNFRSF6BO95407 300 aa14.18□□□□□ -0.14
TSPAN4-210ENST00000464987 IGLV1-40P01703 118 aa14.18□□□□□ -0.14
TSPAN4-210ENST00000464987 TRAV26-2A0A0B4J265 109 aa14.18□□□□□ -0.14
TSPAN4-210ENST00000464987 H3BUA1 57 aa14.18□□□□□ -0.14
TSPAN4-210ENST00000464987 PPBPP02775 128 aa14.18□□□□□ -0.14
TSPAN4-210ENST00000464987 TCTAP57738 103 aa14.18□□□□□ -0.14
TSPAN4-210ENST00000464987 CACNG7P62955 275 aa14.18□□□□□ -0.14
TSPAN4-210ENST00000464987 UBE2V1Q13404 147 aa14.18□□□□□ -0.14
TSPAN4-210ENST00000464987 KIR3DS1Q14943 382 aa14.18□□□□□ -0.14
TSPAN4-210ENST00000464987 MPV17L2Q567V2 206 aa14.18□□□□□ -0.14
TSPAN4-210ENST00000464987 SLC25A34Q6PIV7 304 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 1323.4 ms