RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 ATP5G3P48201 142 aa12.22□□□□□ -0.45
VPS52-215ENST00000464425 TMEM75Q8N9X5 138 aa12.22□□□□□ -0.45
VPS52-215ENST00000464425 LINC01587Q99440 93 aa12.22□□□□□ -0.45
VPS52-215ENST00000464425 KLK5Q9Y337 293 aaPredicted RBP12.22□□□□□ -0.45
VPS52-215ENST00000464425 LCE6AA0A183 80 aa12.21□□□□□ -0.45
VPS52-215ENST00000464425 TMEM189A5PLL7 270 aa12.21□□□□□ -0.45
VPS52-215ENST00000464425 IGLV2-11P01706 119 aa12.21□□□□□ -0.45
VPS52-215ENST00000464425 BCL2P10415 239 aa12.21□□□□□ -0.45
VPS52-215ENST00000464425 HTN1P15515 57 aa12.21□□□□□ -0.45
VPS52-215ENST00000464425 Q6ZTC4 211 aa12.21□□□□□ -0.45
VPS52-215ENST00000464425 VAX2Q9UIW0 290 aa12.21□□□□□ -0.45
VPS52-215ENST00000464425 KLF12Q9Y4X4 402 aa12.21□□□□□ -0.45
VPS52-215ENST00000464425 PLECQ15149 4684 aaKnown RBP12.2□□□□□ -0.46
VPS52-215ENST00000464425 KLLNB2CW77 178 aa12.2□□□□□ -0.46
VPS52-215ENST00000464425 SPART-AS1P0CW21 52 aa12.2□□□□□ -0.46
VPS52-215ENST00000464425 MEF2BQ02080 365 aaPredicted RBP12.2□□□□□ -0.46
VPS52-215ENST00000464425 C12orf74Q32Q52 190 aa12.2□□□□□ -0.46
VPS52-215ENST00000464425 C20orf144Q9BQM9 153 aa12.2□□□□□ -0.46
VPS52-215ENST00000464425 RYR3Q15413 4870 aa12.19□□□□□ -0.46
VPS52-215ENST00000464425 TRAV8-1A0A0A6YYK1 113 aa12.19□□□□□ -0.46
VPS52-215ENST00000464425 S100A9P06702 114 aaKnown RBP12.19□□□□□ -0.46
VPS52-215ENST00000464425 AZU1P20160 251 aa12.19□□□□□ -0.46
VPS52-215ENST00000464425 FLI1Q01543 452 aaPredicted RBP12.19□□□□□ -0.46
VPS52-215ENST00000464425 GFI1BQ5VTD9 330 aa12.19□□□□□ -0.46
VPS52-215ENST00000464425 ZFAND2AQ8N6M9 145 aa12.19□□□□□ -0.46
VPS52-215ENST00000464425 Q8TAT8 98 aa12.19□□□□□ -0.46
VPS52-215ENST00000464425 PSG8Q9UQ74 426 aa12.19□□□□□ -0.46
VPS52-215ENST00000464425 TRBV6-1A0A0K0K1D8 114 aa12.18□□□□□ -0.46
VPS52-215ENST00000464425 RBFOX3A6NFN3 312 aa12.18□□□□□ -0.46
VPS52-215ENST00000464425 PDE6DO43924 150 aa12.18□□□□□ -0.46
VPS52-215ENST00000464425 GPX1P07203 203 aa12.18□□□□□ -0.46
VPS52-215ENST00000464425 IFITM2Q01629 132 aa12.18□□□□□ -0.46
VPS52-215ENST00000464425 SAPCD1Q5SSQ6 148 aa12.18□□□□□ -0.46
VPS52-215ENST00000464425 FAM222AQ5U5X8 452 aa12.18□□□□□ -0.46
VPS52-215ENST00000464425 TMEM256Q8N2U0 113 aa12.18□□□□□ -0.46
VPS52-215ENST00000464425 FMC1Q96HJ9 113 aa12.18□□□□□ -0.46
VPS52-215ENST00000464425 LINC00479Q96M42 142 aa12.18□□□□□ -0.46
VPS52-215ENST00000464425 DKK2Q9UBU2 259 aa12.18□□□□□ -0.46
VPS52-215ENST00000464425 TRAV12-3A0A0B4J271 114 aa12.17□□□□□ -0.46
VPS52-215ENST00000464425 TAS2R60P59551 318 aa12.17□□□□□ -0.46
VPS52-215ENST00000464425 RAB14P61106 215 aa12.17□□□□□ -0.46
VPS52-215ENST00000464425 TMEM183BQ1AE95 376 aa12.17□□□□□ -0.46
VPS52-215ENST00000464425 C2CD4CQ8TF44 421 aa12.17□□□□□ -0.46
VPS52-215ENST00000464425 C11orf52Q96A22 123 aa12.17□□□□□ -0.46
VPS52-215ENST00000464425 TVP23CQ96ET8 276 aa12.17□□□□□ -0.46
VPS52-215ENST00000464425 SGK494Q96LW2 274 aa12.17□□□□□ -0.46
VPS52-215ENST00000464425 NDFIP1Q9BT67 221 aa12.17□□□□□ -0.46
VPS52-215ENST00000464425 TREM1Q9NP99 234 aa12.17□□□□□ -0.46
VPS52-215ENST00000464425 DNAH1Q9P2D7 4330 aa12.16□□□□□ -0.46
VPS52-215ENST00000464425 TRAV10A0A0B4J240 114 aa12.16□□□□□ -0.46
VPS52-215ENST00000464425 TRAV34A0A0B4J273 112 aa12.16□□□□□ -0.46
VPS52-215ENST00000464425 SCO2A0A1W2PP80 73 aa12.16□□□□□ -0.46
VPS52-215ENST00000464425 C7orf71A4D174 169 aa12.16□□□□□ -0.46
VPS52-215ENST00000464425 IGLL5B9A064 214 aa12.16□□□□□ -0.46
VPS52-215ENST00000464425 H7BYZ3 331 aa12.16□□□□□ -0.46
VPS52-215ENST00000464425 NDUFS6O75380 124 aaKnown RBP12.16□□□□□ -0.46
VPS52-215ENST00000464425 ZNF324O75467 553 aaPredicted RBP12.16□□□□□ -0.46
VPS52-215ENST00000464425 ZNF506Q5JVG8 444 aa12.16□□□□□ -0.46
VPS52-215ENST00000464425 PRNTQ86SH4 94 aa12.16□□□□□ -0.46
VPS52-215ENST00000464425 FAM210AQ96ND0 272 aa12.16□□□□□ -0.46
VPS52-215ENST00000464425 ZFP30Q9Y2G7 519 aa12.16□□□□□ -0.46
VPS52-215ENST00000464425 RNASE4P34096 147 aaKnown RBP12.15□□□□□ -0.46
VPS52-215ENST00000464425 AKR1C3P42330 323 aa12.15□□□□□ -0.46
VPS52-215ENST00000464425 UBE2G1P62253 170 aa12.15□□□□□ -0.46
VPS52-215ENST00000464425 PCNPQ8WW12 178 aaKnown RBP12.15□□□□□ -0.46
VPS52-215ENST00000464425 NIPSNAP3BQ9BS92 247 aa12.15□□□□□ -0.46
VPS52-215ENST00000464425 DEFB131BA0A096LNP1 70 aa12.14□□□□□ -0.47
VPS52-215ENST00000464425 BTN1A1Q13410 526 aa12.14□□□□□ -0.47
VPS52-215ENST00000464425 Q6AWC8 147 aa12.14□□□□□ -0.47
VPS52-215ENST00000464425 COX8CQ7Z4L0 72 aa12.14□□□□□ -0.47
VPS52-215ENST00000464425 Q86TA4 180 aa12.14□□□□□ -0.47
VPS52-215ENST00000464425 LYSTQ99698 3801 aa12.14□□□□□ -0.47
VPS52-215ENST00000464425 ALMS1Q8TCU4 4167 aa12.14□□□□□ -0.47
VPS52-215ENST00000464425 TEX48A0A1B0GUV7 120 aa12.13□□□□□ -0.47
VPS52-215ENST00000464425 PLAC8L1A1L4L8 177 aa12.13□□□□□ -0.47
VPS52-215ENST00000464425 LTAP01374 205 aa12.13□□□□□ -0.47
VPS52-215ENST00000464425 PRR9Q5T870 116 aa12.13□□□□□ -0.47
VPS52-215ENST00000464425 LINC00467Q9BRT7 94 aa12.13□□□□□ -0.47
VPS52-215ENST00000464425 EIF5A2Q9GZV4 153 aaKnown RBP12.13□□□□□ -0.47
VPS52-215ENST00000464425 RYR2Q92736 4967 aa12.13□□□□□ -0.47
VPS52-215ENST00000464425 TMEM250H0YL14 139 aa12.12□□□□□ -0.47
VPS52-215ENST00000464425 LY6G6CO95867 125 aa12.12□□□□□ -0.47
VPS52-215ENST00000464425 RPL35P42766 123 aaKnown RBP12.12□□□□□ -0.47
VPS52-215ENST00000464425 DAD1P61803 113 aa12.12□□□□□ -0.47
VPS52-215ENST00000464425 SMUG1Q53HV7 270 aa12.12□□□□□ -0.47
VPS52-215ENST00000464425 TOR2AQ5JU69 321 aa12.12□□□□□ -0.47
VPS52-215ENST00000464425 CLLU1Q5K131 121 aa12.12□□□□□ -0.47
VPS52-215ENST00000464425 C16orf74Q96GX8 76 aa12.12□□□□□ -0.47
VPS52-215ENST00000464425 PYGO2Q9BRQ0 406 aa12.12□□□□□ -0.47
VPS52-215ENST00000464425 MED9Q9NWA0 146 aa12.12□□□□□ -0.47
VPS52-215ENST00000464425 HTN3P15516 51 aa12.11□□□□□ -0.47
VPS52-215ENST00000464425 TMEM183AQ8IXX5 376 aa12.11□□□□□ -0.47
VPS52-215ENST00000464425 RNASE8Q8TDE3 154 aaKnown RBP12.11□□□□□ -0.47
VPS52-215ENST00000464425 TMEM263Q8WUH6 116 aaKnown RBP12.11□□□□□ -0.47
VPS52-215ENST00000464425 LINC00476Q8WZB0 136 aa12.11□□□□□ -0.47
VPS52-215ENST00000464425 C8orf49Q96NF6 230 aa12.11□□□□□ -0.47
VPS52-215ENST00000464425 SMDT1Q9H4I9 107 aa12.11□□□□□ -0.47
VPS52-215ENST00000464425 TRAV21A0A0B4J279 112 aa12.1□□□□□ -0.47
VPS52-215ENST00000464425 LYRM9A8MSI8 78 aa12.1□□□□□ -0.47
VPS52-215ENST00000464425 DEFB130BP0DP73 79 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms