RNA–Protein interactions for RNA: ENST00000462787.5

SMC4-204, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 5,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-204ENST00000462787 A0A1B0GXF2 115 aa12.52□□□□□ -0.41
SMC4-204ENST00000462787 ATP5J2P56134 94 aa12.52□□□□□ -0.41
SMC4-204ENST00000462787 ANKRD29Q8N6D5 301 aa12.52□□□□□ -0.41
SMC4-204ENST00000462787 PAX4O43316 350 aa12.51□□□□□ -0.41
SMC4-204ENST00000462787 TRACP01848 142 aa12.51□□□□□ -0.41
SMC4-204ENST00000462787 I3L3M4 83 aa12.51□□□□□ -0.41
SMC4-204ENST00000462787 C17orf77Q96MU5 243 aa12.51□□□□□ -0.41
SMC4-204ENST00000462787 ZNF415Q09FC8 603 aa12.51□□□□□ -0.41
SMC4-204ENST00000462787 HEATR1Q9H583 2144 aaKnown RBP12.51□□□□□ -0.41
SMC4-204ENST00000462787 TCTEX1D4Q5JR98 221 aa12.51□□□□□ -0.41
SMC4-204ENST00000462787 SMIM20Q8N5G0 67 aa12.51□□□□□ -0.41
SMC4-204ENST00000462787 NDUFA12Q9UI09 145 aa12.51□□□□□ -0.41
SMC4-204ENST00000462787 FRMPD3Q5JV73 1810 aa12.51□□□□□ -0.41
SMC4-204ENST00000462787 LOXP28300 417 aaPredicted RBP12.5□□□□□ -0.41
SMC4-204ENST00000462787 ZNF106Q9H2Y7 1883 aaKnown RBP12.5□□□□□ -0.41
SMC4-204ENST00000462787 LINC00527Q9UJ94 153 aa12.5□□□□□ -0.41
SMC4-204ENST00000462787 IGLV3-9A0A075B6K5 115 aa12.5□□□□□ -0.41
SMC4-204ENST00000462787 ACYP1P07311 99 aa12.5□□□□□ -0.41
SMC4-204ENST00000462787 RPL36AP83881 106 aaKnown RBP12.5□□□□□ -0.41
SMC4-204ENST00000462787 RPL36ALQ969Q0 106 aaKnown RBP12.5□□□□□ -0.41
SMC4-204ENST00000462787 INTS1Q8N201 2190 aaKnown RBP12.5□□□□□ -0.41
SMC4-204ENST00000462787 TRBV6-1A0A0K0K1D8 114 aa12.49□□□□□ -0.41
SMC4-204ENST00000462787 SOCS3O14543 225 aa12.49□□□□□ -0.41
SMC4-204ENST00000462787 RHPN1-AS1Q9BWJ2 59 aa12.49□□□□□ -0.41
SMC4-204ENST00000462787 IGHV1-69DA0A0B4J2H0 117 aa12.49□□□□□ -0.41
SMC4-204ENST00000462787 RBAKDNA6NC62 111 aa12.49□□□□□ -0.41
SMC4-204ENST00000462787 C7orf69Q9H7B7 122 aa12.49□□□□□ -0.41
SMC4-204ENST00000462787 IGHV3-73A0A0B4J1V6 119 aa12.49□□□□□ -0.41
SMC4-204ENST00000462787 C19orf71A6NCJ1 209 aa12.48□□□□□ -0.41
SMC4-204ENST00000462787 INS-IGF2F8WCM5 200 aa12.48□□□□□ -0.41
SMC4-204ENST00000462787 ANXA2RQ3ZCQ2 193 aa12.48□□□□□ -0.41
SMC4-204ENST00000462787 IGLV2-8P01709 118 aa12.48□□□□□ -0.41
SMC4-204ENST00000462787 TRAV12-1A0A0B4J245 112 aa12.48□□□□□ -0.41
SMC4-204ENST00000462787 CRIP3Q6Q6R5 217 aa12.48□□□□□ -0.41
SMC4-204ENST00000462787 LY6G6EA0A0G2JKS1 128 aa12.47□□□□□ -0.41
SMC4-204ENST00000462787 CD59P13987 128 aa12.47□□□□□ -0.41
SMC4-204ENST00000462787 DTX1Q86Y01 620 aa12.47□□□□□ -0.41
SMC4-204ENST00000462787 U3KQA8 63 aa12.47□□□□□ -0.41
SMC4-204ENST00000462787 ZNF318Q5VUA4 2279 aa12.47□□□□□ -0.41
SMC4-204ENST00000462787 IGKV1OR2-108A0A075B7D4 117 aa12.47□□□□□ -0.41
SMC4-204ENST00000462787 DIAPH2-AS1Q14236 149 aa12.47□□□□□ -0.41
SMC4-204ENST00000462787 MYO7BQ6PIF6 2116 aa12.47□□□□□ -0.41
SMC4-204ENST00000462787 TMEM126AQ9H061 195 aa12.47□□□□□ -0.41
SMC4-204ENST00000462787 KMT2EQ8IZD2 1858 aa12.46□□□□□ -0.41
SMC4-204ENST00000462787 Q6ZPA2 131 aa12.46□□□□□ -0.41
SMC4-204ENST00000462787 STHQ8IWL8 128 aa12.46□□□□□ -0.41
SMC4-204ENST00000462787 MRPL53Q96EL3 112 aaKnown RBP12.46□□□□□ -0.41
SMC4-204ENST00000462787 SRSF2Q01130 221 aaKnown RBP12.46□□□□□ -0.41
SMC4-204ENST00000462787 GATA1P15976 413 aaPredicted RBP12.46□□□□□ -0.42
SMC4-204ENST00000462787 MALP21145 153 aa12.46□□□□□ -0.42
SMC4-204ENST00000462787 CCL19Q99731 98 aa12.46□□□□□ -0.42
SMC4-204ENST00000462787 DAZ1Q9NQZ3 744 aaKnown RBP12.46□□□□□ -0.42
SMC4-204ENST00000462787 ODF1Q14990 250 aa12.46□□□□□ -0.42
SMC4-204ENST00000462787 LENEPQ9Y5L5 61 aa12.46□□□□□ -0.42
SMC4-204ENST00000462787 ZNF503Q96F45 646 aa12.45□□□□□ -0.42
SMC4-204ENST00000462787 C1orf159Q96HA4 380 aa12.45□□□□□ -0.42
SMC4-204ENST00000462787 TTTY13Q9BZ97 58 aa12.45□□□□□ -0.42
SMC4-204ENST00000462787 C22orf46C9J442 243 aa12.45□□□□□ -0.42
SMC4-204ENST00000462787 COL8A2P25067 703 aa12.45□□□□□ -0.42
SMC4-204ENST00000462787 CHCHD5Q9BSY4 110 aa12.45□□□□□ -0.42
SMC4-204ENST00000462787 PRSS22Q9GZN4 317 aa12.45□□□□□ -0.42
SMC4-204ENST00000462787 DYNAPQ8N1N2 210 aa12.45□□□□□ -0.42
SMC4-204ENST00000462787 CFHR4Q92496 578 aa12.45□□□□□ -0.42
SMC4-204ENST00000462787 WNK2Q9Y3S1 2297 aa12.45□□□□□ -0.42
SMC4-204ENST00000462787 YLPM1P49750 1951 aaKnown RBP12.44□□□□□ -0.42
SMC4-204ENST00000462787 GDF5OSQ5U4N7 250 aa12.44□□□□□ -0.42
SMC4-204ENST00000462787 TMEM219Q86XT9 240 aa12.44□□□□□ -0.42
SMC4-204ENST00000462787 A0A0G2JNJ9 132 aa12.44□□□□□ -0.42
SMC4-204ENST00000462787 RHODO00212 210 aa12.44□□□□□ -0.42
SMC4-204ENST00000462787 MBD6Q96DN6 1003 aa12.44□□□□□ -0.42
SMC4-204ENST00000462787 Q9UFV3 132 aa12.44□□□□□ -0.42
SMC4-204ENST00000462787 THADAQ6YHU6 1953 aa12.44□□□□□ -0.42
SMC4-204ENST00000462787 TRGV4A0A0C4DH28 118 aa12.44□□□□□ -0.42
SMC4-204ENST00000462787 RHOHQ15669 191 aa12.44□□□□□ -0.42
SMC4-204ENST00000462787 COL4A4P53420 1690 aaPredicted RBP12.43□□□□□ -0.42
SMC4-204ENST00000462787 TRAV13-1A0A0B4J241 112 aa12.43□□□□□ -0.42
SMC4-204ENST00000462787 AGPAT4-IT1Q9H0P7 198 aa12.43□□□□□ -0.42
SMC4-204ENST00000462787 LAMTOR3Q9UHA4 124 aa12.43□□□□□ -0.42
SMC4-204ENST00000462787 ATP6V0E1O15342 81 aa12.43□□□□□ -0.42
SMC4-204ENST00000462787 KAAG1Q9UBP8 84 aa12.43□□□□□ -0.42
SMC4-204ENST00000462787 ZNF625Q96I27 306 aaPredicted RBP12.43□□□□□ -0.42
SMC4-204ENST00000462787 LHBP01229 141 aa12.43□□□□□ -0.42
SMC4-204ENST00000462787 PHLDA1Q8WV24 401 aaPredicted RBP12.43□□□□□ -0.42
SMC4-204ENST00000462787 E9PLD3 99 aa12.42□□□□□ -0.42
SMC4-204ENST00000462787 LINC01620Q4KN68 170 aa12.42□□□□□ -0.42
SMC4-204ENST00000462787 JPT2Q9H910 190 aa12.42□□□□□ -0.42
SMC4-204ENST00000462787 ZDBF2Q9HCK1 2354 aa12.42□□□□□ -0.42
SMC4-204ENST00000462787 ZNF407Q9C0G0 2248 aa12.42□□□□□ -0.42
SMC4-204ENST00000462787 OBSL1O75147 1896 aa12.42□□□□□ -0.42
SMC4-204ENST00000462787 I3L2K1 104 aa12.42□□□□□ -0.42
SMC4-204ENST00000462787 APC2O95996 2303 aa12.42□□□□□ -0.42
SMC4-204ENST00000462787 E7EQL1 145 aa12.42□□□□□ -0.42
SMC4-204ENST00000462787 IGKV1-17P01599 117 aa12.42□□□□□ -0.42
SMC4-204ENST00000462787 CR1LQ2VPA4 569 aa12.42□□□□□ -0.42
SMC4-204ENST00000462787 VWC2LB2RUY7 222 aa12.41□□□□□ -0.42
SMC4-204ENST00000462787 MSRB1Q9NZV6 116 aa12.41□□□□□ -0.42
SMC4-204ENST00000462787 SPANXB1Q9NS25 103 aaPredicted RBP12.41□□□□□ -0.42
SMC4-204ENST00000462787 DOCK7Q96N67 2140 aa12.41□□□□□ -0.42
SMC4-204ENST00000462787 AKAP6Q13023 2319 aa12.4□□□□□ -0.42
SMC4-204ENST00000462787 PIFOQ8TCI5 191 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms