RNA–Protein interactions for RNA: ENST00000460289.5

PTPN4-208, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-208ENST00000460289 ARPC5LQ9BPX5 153 aa16.13■□□□□ 0.17
PTPN4-208ENST00000460289 ACTR3CQ9C0K3 210 aaPredicted RBP16.13■□□□□ 0.17
PTPN4-208ENST00000460289 SH3BGRL3Q9H299 93 aa16.13■□□□□ 0.17
PTPN4-208ENST00000460289 RPH3ALQ9UNE2 315 aa16.13■□□□□ 0.17
PTPN4-208ENST00000460289 TCL1AP56279 114 aa16.12■□□□□ 0.17
PTPN4-208ENST00000460289 ST6GAL2Q96JF0 529 aa16.12■□□□□ 0.17
PTPN4-208ENST00000460289 ATG101Q9BSB4 218 aa16.12■□□□□ 0.17
PTPN4-208ENST00000460289 TRGV2A0A075B6R0 118 aa16.11■□□□□ 0.17
PTPN4-208ENST00000460289 TAAR5O14804 337 aa16.11■□□□□ 0.17
PTPN4-208ENST00000460289 CXorf1O96002 111 aa16.11■□□□□ 0.17
PTPN4-208ENST00000460289 GCHFRP30047 84 aa16.11■□□□□ 0.17
PTPN4-208ENST00000460289 LGALS9BQ3B8N2 356 aa16.11■□□□□ 0.17
PTPN4-208ENST00000460289 Q6ZQT7 251 aa16.11■□□□□ 0.17
PTPN4-208ENST00000460289 GOLT1AQ6ZVE7 132 aa16.11■□□□□ 0.17
PTPN4-208ENST00000460289 SUN5Q8TC36 379 aa16.11■□□□□ 0.17
PTPN4-208ENST00000460289 C18orf15Q96N68 181 aa16.11■□□□□ 0.17
PTPN4-208ENST00000460289 TMEM167BQ9NRX6 74 aa16.11■□□□□ 0.17
PTPN4-208ENST00000460289 DNAH10Q8IVF4 4471 aa16.11■□□□□ 0.17
PTPN4-208ENST00000460289 G3V3Q6 166 aa16.1■□□□□ 0.17
PTPN4-208ENST00000460289 Q6AWC8 147 aa16.1■□□□□ 0.17
PTPN4-208ENST00000460289 TP53TG3Q9ULZ0 132 aa16.1■□□□□ 0.17
PTPN4-208ENST00000460289 KLF12Q9Y4X4 402 aa16.1■□□□□ 0.17
PTPN4-208ENST00000460289 TRAV26-1A0A087WT03 109 aa16.09■□□□□ 0.17
PTPN4-208ENST00000460289 TRGV1A0A0A0MS02 117 aa16.09■□□□□ 0.17
PTPN4-208ENST00000460289 SERTM2A0A1B0GWG4 89 aa16.09■□□□□ 0.17
PTPN4-208ENST00000460289 SPINK4O60575 86 aa16.09■□□□□ 0.17
PTPN4-208ENST00000460289 M0R2N4 97 aa16.08■□□□□ 0.16
PTPN4-208ENST00000460289 ARPC5O15511 151 aa16.08■□□□□ 0.16
PTPN4-208ENST00000460289 HOXA5P20719 270 aa16.08■□□□□ 0.16
PTPN4-208ENST00000460289 CCL18P55774 89 aa16.08■□□□□ 0.16
PTPN4-208ENST00000460289 TMPRSS5Q9H3S3 457 aa16.08■□□□□ 0.16
PTPN4-208ENST00000460289 H3BNG1 76 aa16.07■□□□□ 0.16
PTPN4-208ENST00000460289 ZNF415Q09FC8 603 aa16.07■□□□□ 0.16
PTPN4-208ENST00000460289 MUC21Q5SSG8 566 aa16.07■□□□□ 0.16
PTPN4-208ENST00000460289 FAM159AQ6UWV7 190 aa16.07■□□□□ 0.16
PTPN4-208ENST00000460289 LINC00336Q6ZUF6 198 aa16.07■□□□□ 0.16
PTPN4-208ENST00000460289 C5orf17Q8NAS9 161 aa16.07■□□□□ 0.16
PTPN4-208ENST00000460289 FRAS1Q86XX4 4008 aa16.06■□□□□ 0.16
PTPN4-208ENST00000460289 IGLV2-18A0A075B6J9 118 aa16.06■□□□□ 0.16
PTPN4-208ENST00000460289 K7EQM0 130 aa16.06■□□□□ 0.16
PTPN4-208ENST00000460289 GNG5P63218 68 aa16.06■□□□□ 0.16
PTPN4-208ENST00000460289 TREM1Q9NP99 234 aa16.06■□□□□ 0.16
PTPN4-208ENST00000460289 TRAV8-1A0A0A6YYK1 113 aa16.05■□□□□ 0.16
PTPN4-208ENST00000460289 A0A0J9YY99 117 aa16.05■□□□□ 0.16
PTPN4-208ENST00000460289 CTXND1A0A1B0GTU2 59 aa16.05■□□□□ 0.16
PTPN4-208ENST00000460289 TCRAP04437 139 aa16.05■□□□□ 0.16
PTPN4-208ENST00000460289 SUMO1P63165 101 aaKnown RBP16.05■□□□□ 0.16
PTPN4-208ENST00000460289 AKR1C8PQ5T2L2 129 aa16.05■□□□□ 0.16
PTPN4-208ENST00000460289 TRGV11A0A075B6L2 103 aa16.04■□□□□ 0.16
PTPN4-208ENST00000460289 TRAV21A0A0B4J279 112 aa16.04■□□□□ 0.16
PTPN4-208ENST00000460289 IQCF2Q8IXL9 164 aa16.04■□□□□ 0.16
PTPN4-208ENST00000460289 NDFIP1Q9BT67 221 aa16.04■□□□□ 0.16
PTPN4-208ENST00000460289 A0A1W2PRE2 83 aa16.03■□□□□ 0.16
PTPN4-208ENST00000460289 TDRG1Q3Y452 100 aa16.03■□□□□ 0.16
PTPN4-208ENST00000460289 Q6ZR54 194 aa16.03■□□□□ 0.16
PTPN4-208ENST00000460289 SSX7Q7RTT5 188 aa16.03■□□□□ 0.16
PTPN4-208ENST00000460289 SPXQ9BT56 116 aa16.03■□□□□ 0.16
PTPN4-208ENST00000460289 CYTL1Q9NRR1 136 aa16.03■□□□□ 0.16
PTPN4-208ENST00000460289 EPDR1Q9UM22 224 aa16.03■□□□□ 0.16
PTPN4-208ENST00000460289 SMLR1H3BR10 107 aa16.02■□□□□ 0.16
PTPN4-208ENST00000460289 TMEM183BQ1AE95 376 aa16.02■□□□□ 0.16
PTPN4-208ENST00000460289 TMEM183AQ8IXX5 376 aa16.02■□□□□ 0.16
PTPN4-208ENST00000460289 TVP23CQ96ET8 276 aa16.02■□□□□ 0.16
PTPN4-208ENST00000460289 MRPL16Q9NX20 251 aaKnown RBP16.02■□□□□ 0.16
PTPN4-208ENST00000460289 MDFICQ9P1T7 246 aa16.02■□□□□ 0.16
PTPN4-208ENST00000460289 NAGKQ9UJ70 344 aa16.02■□□□□ 0.16
PTPN4-208ENST00000460289 FBLL1A6NHQ2 334 aaKnown RBP16.01■□□□□ 0.15
PTPN4-208ENST00000460289 ZNF345Q14585 488 aa16.01■□□□□ 0.15
PTPN4-208ENST00000460289 ZNF726P1Q15940 193 aa16.01■□□□□ 0.15
PTPN4-208ENST00000460289 SGK494Q96LW2 274 aa16.01■□□□□ 0.15
PTPN4-208ENST00000460289 LINC00588Q9Y4M8 146 aa16.01■□□□□ 0.15
PTPN4-208ENST00000460289 GGTLC3B5MD39 225 aa16■□□□□ 0.15
PTPN4-208ENST00000460289 F6UZH7 168 aa16■□□□□ 0.15
PTPN4-208ENST00000460289 KCNRGQ8N5I3 272 aa16■□□□□ 0.15
PTPN4-208ENST00000460289 CYB561D1Q8N8Q1 229 aa16■□□□□ 0.15
PTPN4-208ENST00000460289 ZNRF2Q8NHG8 242 aa16■□□□□ 0.15
PTPN4-208ENST00000460289 KCNS1Q96KK3 526 aa16■□□□□ 0.15
PTPN4-208ENST00000460289 PSG8Q9UQ74 426 aa16■□□□□ 0.15
PTPN4-208ENST00000460289 HMSDA8MTL9 139 aa15.99■□□□□ 0.15
PTPN4-208ENST00000460289 SLAQ13239 276 aa15.99■□□□□ 0.15
PTPN4-208ENST00000460289 SOHLH1Q5JUK2 328 aa15.99■□□□□ 0.15
PTPN4-208ENST00000460289 NKX6-2Q9C056 277 aaPredicted RBP15.99■□□□□ 0.15
PTPN4-208ENST00000460289 NACAE9PAV3 2078 aa15.99■□□□□ 0.15
PTPN4-208ENST00000460289 FLI1Q01543 452 aaPredicted RBP15.98■□□□□ 0.15
PTPN4-208ENST00000460289 RASL10AQ92737 203 aa15.98■□□□□ 0.15
PTPN4-208ENST00000460289 VSIG2Q96IQ7 327 aa15.98■□□□□ 0.15
PTPN4-208ENST00000460289 A0A0D9SG52 128 aa15.97■□□□□ 0.15
PTPN4-208ENST00000460289 RTL8CO15255 209 aa15.97■□□□□ 0.15
PTPN4-208ENST00000460289 GNRH2O43555 120 aa15.97■□□□□ 0.15
PTPN4-208ENST00000460289 ZFP69Q49AA0 526 aa15.97■□□□□ 0.15
PTPN4-208ENST00000460289 SAPCD1Q5SSQ6 148 aa15.97■□□□□ 0.15
PTPN4-208ENST00000460289 TMEM75Q8N9X5 138 aa15.97■□□□□ 0.15
PTPN4-208ENST00000460289 SDF2L1Q9HCN8 221 aa15.97■□□□□ 0.15
PTPN4-208ENST00000460289 IFNA7P01567 189 aa15.96■□□□□ 0.15
PTPN4-208ENST00000460289 IGLV2-11P01706 119 aa15.96■□□□□ 0.15
PTPN4-208ENST00000460289 IGHV3-53P01767 116 aa15.96■□□□□ 0.15
PTPN4-208ENST00000460289 C1orf134Q5TEV5 83 aa15.96■□□□□ 0.15
PTPN4-208ENST00000460289 PRNTQ86SH4 94 aa15.96■□□□□ 0.15
PTPN4-208ENST00000460289 PRO0255Q9UI72 69 aa15.96■□□□□ 0.15
PTPN4-208ENST00000460289 MUC4Q99102 2169 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms