RNA–Protein interactions for RNA: ENST00000460211.5

ATG4B-213, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 871 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-213ENST00000460211 GOLT1AQ6ZVE7 132 aa10.6□□□□□ -0.71
ATG4B-213ENST00000460211 EIF4E3Q8N5X7 224 aaKnown RBP10.6□□□□□ -0.71
ATG4B-213ENST00000460211 SUN5Q8TC36 379 aa10.6□□□□□ -0.71
ATG4B-213ENST00000460211 CYTL1Q9NRR1 136 aa10.6□□□□□ -0.71
ATG4B-213ENST00000460211 ANXA2RQ3ZCQ2 193 aa10.59□□□□□ -0.71
ATG4B-213ENST00000460211 C5orf17Q8NAS9 161 aa10.59□□□□□ -0.71
ATG4B-213ENST00000460211 IGHV1OR15-1A0A075B7D0 117 aa10.58□□□□□ -0.72
ATG4B-213ENST00000460211 F5H768 121 aa10.58□□□□□ -0.72
ATG4B-213ENST00000460211 SUMO1P63165 101 aaKnown RBP10.58□□□□□ -0.72
ATG4B-213ENST00000460211 DAZ2Q13117 558 aaKnown RBP10.58□□□□□ -0.72
ATG4B-213ENST00000460211 OR11H4Q8NGC9 324 aa10.58□□□□□ -0.72
ATG4B-213ENST00000460211 STOML3Q8TAV4 291 aa10.58□□□□□ -0.72
ATG4B-213ENST00000460211 NDFIP1Q9BT67 221 aa10.58□□□□□ -0.72
ATG4B-213ENST00000460211 A0A1W2PRE2 83 aa10.57□□□□□ -0.72
ATG4B-213ENST00000460211 PFDN1O60925 122 aa10.57□□□□□ -0.72
ATG4B-213ENST00000460211 P0DMU3 169 aa10.57□□□□□ -0.72
ATG4B-213ENST00000460211 FAM231AP0DMU4 169 aa10.57□□□□□ -0.72
ATG4B-213ENST00000460211 FAM231CP0DMU5 169 aa10.57□□□□□ -0.72
ATG4B-213ENST00000460211 GNG5P63218 68 aa10.57□□□□□ -0.72
ATG4B-213ENST00000460211 ZNF471Q9BX82 626 aaPredicted RBP10.57□□□□□ -0.72
ATG4B-213ENST00000460211 GAGE12BA1L429 117 aa10.56□□□□□ -0.72
ATG4B-213ENST00000460211 BCL2L11O43521 198 aa10.56□□□□□ -0.72
ATG4B-213ENST00000460211 GAGE7O76087 117 aa10.56□□□□□ -0.72
ATG4B-213ENST00000460211 TCRAP04437 139 aa10.56□□□□□ -0.72
ATG4B-213ENST00000460211 SEC11BP0C7V7 166 aa10.56□□□□□ -0.72
ATG4B-213ENST00000460211 GAGE12FP0CL80 117 aa10.56□□□□□ -0.72
ATG4B-213ENST00000460211 GAGE12GP0CL81 117 aa10.56□□□□□ -0.72
ATG4B-213ENST00000460211 GAGE12IP0CL82 117 aa10.56□□□□□ -0.72
ATG4B-213ENST00000460211 IBA57Q5T440 356 aaKnown RBP10.56□□□□□ -0.72
ATG4B-213ENST00000460211 PRR9Q5T870 116 aa10.56□□□□□ -0.72
ATG4B-213ENST00000460211 TMEM88Q6PEY1 159 aa10.56□□□□□ -0.72
ATG4B-213ENST00000460211 C15orf53Q8NAA6 179 aa10.56□□□□□ -0.72
ATG4B-213ENST00000460211 NKX6-2Q9C056 277 aaPredicted RBP10.56□□□□□ -0.72
ATG4B-213ENST00000460211 TREM1Q9NP99 234 aa10.56□□□□□ -0.72
ATG4B-213ENST00000460211 GSN-AS1Q9NRJ2 163 aa10.56□□□□□ -0.72
ATG4B-213ENST00000460211 EPDR1Q9UM22 224 aa10.56□□□□□ -0.72
ATG4B-213ENST00000460211 FBLL1A6NHQ2 334 aaKnown RBP10.55□□□□□ -0.72
ATG4B-213ENST00000460211 UMAD1C9J7I0 102 aa10.55□□□□□ -0.72
ATG4B-213ENST00000460211 IFNA7P01567 189 aa10.55□□□□□ -0.72
ATG4B-213ENST00000460211 ZNF726P1Q15940 193 aa10.55□□□□□ -0.72
ATG4B-213ENST00000460211 Q6AWC8 147 aa10.55□□□□□ -0.72
ATG4B-213ENST00000460211 FAM159AQ6UWV7 190 aa10.55□□□□□ -0.72
ATG4B-213ENST00000460211 SSX7Q7RTT5 188 aa10.55□□□□□ -0.72
ATG4B-213ENST00000460211 TRGV2A0A075B6R0 118 aa10.54□□□□□ -0.72
ATG4B-213ENST00000460211 TRAV8-1A0A0A6YYK1 113 aa10.54□□□□□ -0.72
ATG4B-213ENST00000460211 TRAV21A0A0B4J279 112 aa10.54□□□□□ -0.72
ATG4B-213ENST00000460211 MAP1LC3B2A6NCE7 125 aa10.54□□□□□ -0.72
ATG4B-213ENST00000460211 FGF8P55075 233 aaPredicted RBP10.54□□□□□ -0.72
ATG4B-213ENST00000460211 TCL1AP56279 114 aa10.54□□□□□ -0.72
ATG4B-213ENST00000460211 ZNF415Q09FC8 603 aa10.54□□□□□ -0.72
ATG4B-213ENST00000460211 Q6ZNX1 250 aa10.54□□□□□ -0.72
ATG4B-213ENST00000460211 TMUB2Q71RG4 321 aa10.54□□□□□ -0.72
ATG4B-213ENST00000460211 LINC00612Q8N6U2 182 aa10.54□□□□□ -0.72
ATG4B-213ENST00000460211 CYB561D1Q8N8Q1 229 aa10.54□□□□□ -0.72
ATG4B-213ENST00000460211 C11orf72Q8NBR9 251 aa10.54□□□□□ -0.72
ATG4B-213ENST00000460211 ATG101Q9BSB4 218 aa10.54□□□□□ -0.72
ATG4B-213ENST00000460211 MAP1LC3BQ9GZQ8 125 aa10.54□□□□□ -0.72
ATG4B-213ENST00000460211 TRGV11A0A075B6L2 103 aa10.53□□□□□ -0.72
ATG4B-213ENST00000460211 TRGV1A0A0A0MS02 117 aa10.53□□□□□ -0.72
ATG4B-213ENST00000460211 GGTLC3B5MD39 225 aa10.53□□□□□ -0.72
ATG4B-213ENST00000460211 TPT1P13693 172 aaKnown RBP10.53□□□□□ -0.72
ATG4B-213ENST00000460211 PPT1P50897 306 aa10.53□□□□□ -0.72
ATG4B-213ENST00000460211 MUC21Q5SSG8 566 aa10.53□□□□□ -0.72
ATG4B-213ENST00000460211 UBE2DNLQ8IWF7 75 aa10.53□□□□□ -0.72
ATG4B-213ENST00000460211 TCTE3Q8IZS6 198 aa10.53□□□□□ -0.72
ATG4B-213ENST00000460211 POM121L12Q8N7R1 296 aa10.53□□□□□ -0.72
ATG4B-213ENST00000460211 TMPRSS5Q9H3S3 457 aa10.53□□□□□ -0.72
ATG4B-213ENST00000460211 PSG8Q9UQ74 426 aa10.53□□□□□ -0.72
ATG4B-213ENST00000460211 VPS13DQ5THJ4 4388 aa10.52□□□□□ -0.73
ATG4B-213ENST00000460211 UBE2G2P60604 165 aa10.52□□□□□ -0.73
ATG4B-213ENST00000460211 FLI1Q01543 452 aaPredicted RBP10.52□□□□□ -0.73
ATG4B-213ENST00000460211 OR5I1Q13606 314 aa10.52□□□□□ -0.73
ATG4B-213ENST00000460211 ZFP69Q49AA0 526 aa10.52□□□□□ -0.73
ATG4B-213ENST00000460211 SAPCD1Q5SSQ6 148 aa10.52□□□□□ -0.73
ATG4B-213ENST00000460211 EIF5AL1Q6IS14 154 aaKnown RBP10.52□□□□□ -0.73
ATG4B-213ENST00000460211 DPPA3Q6W0C5 159 aa10.52□□□□□ -0.73
ATG4B-213ENST00000460211 Q6ZQT7 251 aa10.52□□□□□ -0.73
ATG4B-213ENST00000460211 Q6ZTI0 123 aa10.52□□□□□ -0.73
ATG4B-213ENST00000460211 TMEM75Q8N9X5 138 aa10.52□□□□□ -0.73
ATG4B-213ENST00000460211 SGK494Q96LW2 274 aa10.52□□□□□ -0.73
ATG4B-213ENST00000460211 NAGKQ9UJ70 344 aa10.52□□□□□ -0.73
ATG4B-213ENST00000460211 TP53TG3Q9ULZ0 132 aa10.52□□□□□ -0.73
ATG4B-213ENST00000460211 KLF12Q9Y4X4 402 aa10.52□□□□□ -0.73
ATG4B-213ENST00000460211 KIAA1109Q2LD37 5005 aa10.52□□□□□ -0.73
ATG4B-213ENST00000460211 FAM74A7A6NL05 159 aa10.51□□□□□ -0.73
ATG4B-213ENST00000460211 F6UZH7 168 aa10.51□□□□□ -0.73
ATG4B-213ENST00000460211 SPINK4O60575 86 aa10.51□□□□□ -0.73
ATG4B-213ENST00000460211 LGALS9BQ3B8N2 356 aa10.51□□□□□ -0.73
ATG4B-213ENST00000460211 PRNTQ86SH4 94 aa10.51□□□□□ -0.73
ATG4B-213ENST00000460211 FAM213BQ8TBF2 198 aa10.51□□□□□ -0.73
ATG4B-213ENST00000460211 HIST1H2BAQ96A08 127 aa10.51□□□□□ -0.73
ATG4B-213ENST00000460211 KCNS1Q96KK3 526 aa10.51□□□□□ -0.73
ATG4B-213ENST00000460211 NUDT3O95989 172 aa10.5□□□□□ -0.73
ATG4B-213ENST00000460211 FHITP49789 147 aa10.5□□□□□ -0.73
ATG4B-213ENST00000460211 TMEM183BQ1AE95 376 aa10.5□□□□□ -0.73
ATG4B-213ENST00000460211 TDRG1Q3Y452 100 aa10.5□□□□□ -0.73
ATG4B-213ENST00000460211 RNF212Q495C1 297 aa10.5□□□□□ -0.73
ATG4B-213ENST00000460211 SMUG1Q53HV7 270 aa10.5□□□□□ -0.73
ATG4B-213ENST00000460211 TMEM183AQ8IXX5 376 aa10.5□□□□□ -0.73
ATG4B-213ENST00000460211 SFT2D1Q8WV19 159 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 103.8 ms