RNA–Protein interactions for RNA: ENST00000455362.1

HMGB1P4-201, Transcript of high mobility group box 1 pseudogene 4, humanhuman

BASIC

Gene HMGB1P4, Length 567 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P4-201ENST00000455362 C16orf95Q9H693 158 aa3.89□□□□□ -1.79
HMGB1P4-201ENST00000455362 NOTCH3Q9UM47 2321 aa3.89□□□□□ -1.79
HMGB1P4-201ENST00000455362 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.88□□□□□ -1.79
HMGB1P4-201ENST00000455362 A0A1B0GV50 99 aa3.88□□□□□ -1.79
HMGB1P4-201ENST00000455362 MAP1LC3B2A6NCE7 125 aa3.88□□□□□ -1.79
HMGB1P4-201ENST00000455362 DNASE2O00115 360 aaPredicted RBP3.88□□□□□ -1.79
HMGB1P4-201ENST00000455362 TCAPO15273 167 aa3.88□□□□□ -1.79
HMGB1P4-201ENST00000455362 HMGB3O15347 200 aaKnown RBP3.88□□□□□ -1.79
HMGB1P4-201ENST00000455362 TGOLN2O43493 480 aa3.88□□□□□ -1.79
HMGB1P4-201ENST00000455362 COX7A2P2O60397 106 aa3.88□□□□□ -1.79
HMGB1P4-201ENST00000455362 IGHV3-11P01762 117 aa3.88□□□□□ -1.79
HMGB1P4-201ENST00000455362 OR5G3P0C626 314 aa3.88□□□□□ -1.79
HMGB1P4-201ENST00000455362 CT45A10P0DMU9 189 aa3.88□□□□□ -1.79
HMGB1P4-201ENST00000455362 ORM2P19652 201 aa3.88□□□□□ -1.79
HMGB1P4-201ENST00000455362 RAB4AP20338 218 aa3.88□□□□□ -1.79
HMGB1P4-201ENST00000455362 S100PP25815 95 aa3.88□□□□□ -1.79
HMGB1P4-201ENST00000455362 FGF8P55075 233 aaPredicted RBP3.88□□□□□ -1.79
HMGB1P4-201ENST00000455362 FAM78BQ5VT40 261 aa3.88□□□□□ -1.79
HMGB1P4-201ENST00000455362 C10orf113Q5VZT2 155 aa3.88□□□□□ -1.79
HMGB1P4-201ENST00000455362 ZNF343Q6P1L6 599 aa3.88□□□□□ -1.79
HMGB1P4-201ENST00000455362 C12orf54Q6X4T0 127 aa3.88□□□□□ -1.79
HMGB1P4-201ENST00000455362 IL34Q6ZMJ4 242 aa3.88□□□□□ -1.79
HMGB1P4-201ENST00000455362 MIR17HGQ75NE6 70 aa3.88□□□□□ -1.79
HMGB1P4-201ENST00000455362 COMMD7Q86VX2 200 aa3.88□□□□□ -1.79
HMGB1P4-201ENST00000455362 EIF4E3Q8N5X7 224 aaKnown RBP3.88□□□□□ -1.79
HMGB1P4-201ENST00000455362 OR4X2Q8NGF9 303 aa3.88□□□□□ -1.79
HMGB1P4-201ENST00000455362 OR51G1Q8NGK1 321 aa3.88□□□□□ -1.79
HMGB1P4-201ENST00000455362 MYOZ3Q8TDC0 251 aa3.88□□□□□ -1.79
HMGB1P4-201ENST00000455362 FAM167A-AS1Q96KT0 104 aa3.88□□□□□ -1.79
HMGB1P4-201ENST00000455362 PFDN5Q99471 154 aa3.88□□□□□ -1.79
HMGB1P4-201ENST00000455362 MAP1LC3BQ9GZQ8 125 aa3.88□□□□□ -1.79
HMGB1P4-201ENST00000455362 TMPRSS5Q9H3S3 457 aa3.88□□□□□ -1.79
HMGB1P4-201ENST00000455362 SLC25A22Q9H936 323 aa3.88□□□□□ -1.79
HMGB1P4-201ENST00000455362 MRPL27Q9P0M9 148 aaKnown RBP3.88□□□□□ -1.79
HMGB1P4-201ENST00000455362 DOK5Q9P104 306 aa3.88□□□□□ -1.79
HMGB1P4-201ENST00000455362 FUT9Q9Y231 359 aa3.88□□□□□ -1.79
HMGB1P4-201ENST00000455362 TRAV5A0A0B4J249 113 aa3.87□□□□□ -1.79
HMGB1P4-201ENST00000455362 IGHV3-35A0A0C4DH35 117 aa3.87□□□□□ -1.79
HMGB1P4-201ENST00000455362 TMEM238C9JI98 176 aa3.87□□□□□ -1.79
HMGB1P4-201ENST00000455362 PPP5D1E7EU14 171 aa3.87□□□□□ -1.79
HMGB1P4-201ENST00000455362 TCF21O43680 179 aa3.87□□□□□ -1.79
HMGB1P4-201ENST00000455362 CXorf1O96002 111 aa3.87□□□□□ -1.79
HMGB1P4-201ENST00000455362 TRBV12-3P01733 135 aa3.87□□□□□ -1.79
HMGB1P4-201ENST00000455362 IL4P05112 153 aa3.87□□□□□ -1.79
HMGB1P4-201ENST00000455362 CD5P06127 495 aa3.87□□□□□ -1.79
HMGB1P4-201ENST00000455362 SMIM6P0DI80 62 aa3.87□□□□□ -1.79
HMGB1P4-201ENST00000455362 C8orf88P0DMB2 117 aa3.87□□□□□ -1.79
HMGB1P4-201ENST00000455362 RAB5AP20339 215 aa3.87□□□□□ -1.79
HMGB1P4-201ENST00000455362 GCHFRP30047 84 aa3.87□□□□□ -1.79
HMGB1P4-201ENST00000455362 LYZP61626 148 aa3.87□□□□□ -1.79
HMGB1P4-201ENST00000455362 RPL32P62910 135 aaKnown RBP3.87□□□□□ -1.79
HMGB1P4-201ENST00000455362 BTN1A1Q13410 526 aa3.87□□□□□ -1.79
HMGB1P4-201ENST00000455362 TCTEX1D4Q5JR98 221 aa3.87□□□□□ -1.79
HMGB1P4-201ENST00000455362 TOMM20LQ6UXN7 152 aa3.87□□□□□ -1.79
HMGB1P4-201ENST00000455362 LINC00305Q7Z4B0 112 aa3.87□□□□□ -1.79
HMGB1P4-201ENST00000455362 ZNF575Q86XF7 245 aa3.87□□□□□ -1.79
HMGB1P4-201ENST00000455362 LINC01006Q8NI28 216 aa3.87□□□□□ -1.79
HMGB1P4-201ENST00000455362 UBE2E2Q96LR5 201 aa3.87□□□□□ -1.79
HMGB1P4-201ENST00000455362 PBDC1Q9BVG4 233 aa3.87□□□□□ -1.79
HMGB1P4-201ENST00000455362 MRPL32Q9BYC8 188 aaKnown RBP3.87□□□□□ -1.79
HMGB1P4-201ENST00000455362 HIGD1AQ9Y241 93 aa3.87□□□□□ -1.79
HMGB1P4-201ENST00000455362 CLPSL1A2RUU4 121 aa3.86□□□□□ -1.79
HMGB1P4-201ENST00000455362 RBMY1BA6NDE4 496 aaKnown RBP3.86□□□□□ -1.79
HMGB1P4-201ENST00000455362 RBMY1EA6NEQ0 496 aaKnown RBP3.86□□□□□ -1.79
HMGB1P4-201ENST00000455362 RBFOX3A6NFN3 312 aa3.86□□□□□ -1.79
HMGB1P4-201ENST00000455362 C9JQL5 133 aa3.86□□□□□ -1.79
HMGB1P4-201ENST00000455362 I3L521 148 aa3.86□□□□□ -1.79
HMGB1P4-201ENST00000455362 BMPR1BO00238 502 aa3.86□□□□□ -1.79
HMGB1P4-201ENST00000455362 GGCTO75223 188 aaKnown RBP3.86□□□□□ -1.79
HMGB1P4-201ENST00000455362 RBMY1DP0C7P1 496 aaKnown RBP3.86□□□□□ -1.79
HMGB1P4-201ENST00000455362 RBMY1A1P0DJD3 496 aaKnown RBP3.86□□□□□ -1.79
HMGB1P4-201ENST00000455362 ARL14EPLP0DKL9 152 aa3.86□□□□□ -1.79
HMGB1P4-201ENST00000455362 PSMB3P49720 205 aa3.86□□□□□ -1.79
HMGB1P4-201ENST00000455362 AKR1D1P51857 326 aa3.86□□□□□ -1.79
HMGB1P4-201ENST00000455362 TAS2R45P59539 299 aa3.86□□□□□ -1.79
HMGB1P4-201ENST00000455362 PEA15Q15121 130 aa3.86□□□□□ -1.79
HMGB1P4-201ENST00000455362 GUK1Q16774 197 aa3.86□□□□□ -1.79
HMGB1P4-201ENST00000455362 UFSP1Q6NVU6 142 aa3.86□□□□□ -1.79
HMGB1P4-201ENST00000455362 S100A7AQ86SG5 101 aa3.86□□□□□ -1.79
HMGB1P4-201ENST00000455362 SPATA3Q8NHX4 192 aa3.86□□□□□ -1.79
HMGB1P4-201ENST00000455362 C11orf45Q8TAV5 145 aa3.86□□□□□ -1.79
HMGB1P4-201ENST00000455362 SHANK2-AS3Q9BTD1 123 aa3.86□□□□□ -1.79
HMGB1P4-201ENST00000455362 SLC25A2Q9BXI2 301 aa3.86□□□□□ -1.79
HMGB1P4-201ENST00000455362 SLC25A39Q9BZJ4 359 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P4-201ENST00000455362 OCR1Q9BZK8 76 aa3.86□□□□□ -1.79
HMGB1P4-201ENST00000455362 GNB4Q9HAV0 340 aa3.86□□□□□ -1.79
HMGB1P4-201ENST00000455362 GNG13Q9P2W3 67 aa3.86□□□□□ -1.79
HMGB1P4-201ENST00000455362 IGHV3OR16-8A0A075B7F1 116 aa3.85□□□□□ -1.79
HMGB1P4-201ENST00000455362 H3BRN7 92 aa3.85□□□□□ -1.79
HMGB1P4-201ENST00000455362 NDUFA4O00483 81 aa3.85□□□□□ -1.79
HMGB1P4-201ENST00000455362 OR7C2O60412 319 aa3.85□□□□□ -1.79
HMGB1P4-201ENST00000455362 OXTP01178 125 aa3.85□□□□□ -1.79
HMGB1P4-201ENST00000455362 IFNA1P01562 189 aa3.85□□□□□ -1.79
HMGB1P4-201ENST00000455362 HSPB1P04792 205 aaKnown RBP3.85□□□□□ -1.79
HMGB1P4-201ENST00000455362 LGALS1P09382 135 aaKnown RBP3.85□□□□□ -1.79
HMGB1P4-201ENST00000455362 PYYP10082 97 aa3.85□□□□□ -1.79
HMGB1P4-201ENST00000455362 BCL2P10415 239 aa3.85□□□□□ -1.79
HMGB1P4-201ENST00000455362 CD28P10747 220 aa3.85□□□□□ -1.79
HMGB1P4-201ENST00000455362 NPPCP23582 126 aa3.85□□□□□ -1.79
HMGB1P4-201ENST00000455362 CRYBB3P26998 211 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 170.7 ms