RNA–Protein interactions for RNA: ENST00000454134.1

NCKIPSD-208, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 998 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-208ENST00000454134 VSIG2Q96IQ7 327 aa11.41□□□□□ -0.58
NCKIPSD-208ENST00000454134 ARPC5LQ9BPX5 153 aa11.41□□□□□ -0.58
NCKIPSD-208ENST00000454134 MED28Q9H204 178 aa11.41□□□□□ -0.58
NCKIPSD-208ENST00000454134 TRBV7-9A0A0J9YWB2 115 aa11.4□□□□□ -0.58
NCKIPSD-208ENST00000454134 PGPA6NDG6 321 aa11.4□□□□□ -0.58
NCKIPSD-208ENST00000454134 IGHV3-53P01767 116 aa11.4□□□□□ -0.58
NCKIPSD-208ENST00000454134 ZNF266Q14584 549 aa11.4□□□□□ -0.58
NCKIPSD-208ENST00000454134 ESRGQ1W209 222 aa11.4□□□□□ -0.58
NCKIPSD-208ENST00000454134 C18orf15Q96N68 181 aa11.4□□□□□ -0.58
NCKIPSD-208ENST00000454134 OTORQ9NRC9 128 aa11.4□□□□□ -0.58
NCKIPSD-208ENST00000454134 H3BNG1 76 aa11.39□□□□□ -0.59
NCKIPSD-208ENST00000454134 Q5BKY6 102 aa11.39□□□□□ -0.59
NCKIPSD-208ENST00000454134 HSD17B11Q8NBQ5 300 aa11.39□□□□□ -0.59
NCKIPSD-208ENST00000454134 OR10G4Q8NGN3 311 aa11.39□□□□□ -0.59
NCKIPSD-208ENST00000454134 OR10G9Q8NGN4 311 aa11.39□□□□□ -0.59
NCKIPSD-208ENST00000454134 OR10G7Q8NGN6 311 aa11.39□□□□□ -0.59
NCKIPSD-208ENST00000454134 CMTM2Q8TAZ6 248 aa11.39□□□□□ -0.59
NCKIPSD-208ENST00000454134 Q9H8V8 135 aa11.39□□□□□ -0.59
NCKIPSD-208ENST00000454134 HERC2O95714 4834 aa11.39□□□□□ -0.59
NCKIPSD-208ENST00000454134 PKHD1P08F94 4074 aa11.38□□□□□ -0.59
NCKIPSD-208ENST00000454134 A0A096LPF7 62 aa11.38□□□□□ -0.59
NCKIPSD-208ENST00000454134 TNP2Q05952 138 aa11.38□□□□□ -0.59
NCKIPSD-208ENST00000454134 ZNF415Q09FC8 603 aa11.38□□□□□ -0.59
NCKIPSD-208ENST00000454134 PQLC2Q6ZP29 291 aa11.38□□□□□ -0.59
NCKIPSD-208ENST00000454134 GOLT1AQ6ZVE7 132 aa11.38□□□□□ -0.59
NCKIPSD-208ENST00000454134 C6orf223Q8N319 242 aa11.38□□□□□ -0.59
NCKIPSD-208ENST00000454134 MDFICQ9P1T7 246 aa11.38□□□□□ -0.59
NCKIPSD-208ENST00000454134 PKD1P98161 4303 aa11.38□□□□□ -0.59
NCKIPSD-208ENST00000454134 ARL14EPLP0DKL9 152 aa11.37□□□□□ -0.59
NCKIPSD-208ENST00000454134 GNG5P63218 68 aa11.37□□□□□ -0.59
NCKIPSD-208ENST00000454134 ST6GAL2Q96JF0 529 aa11.37□□□□□ -0.59
NCKIPSD-208ENST00000454134 AQP10Q96PS8 301 aa11.37□□□□□ -0.59
NCKIPSD-208ENST00000454134 KRTAP1-5Q9BYS1 174 aa11.37□□□□□ -0.59
NCKIPSD-208ENST00000454134 LENEPQ9Y5L5 61 aa11.37□□□□□ -0.59
NCKIPSD-208ENST00000454134 KIAA1109Q2LD37 5005 aa11.37□□□□□ -0.59
NCKIPSD-208ENST00000454134 MUC4Q99102 2169 aa11.36□□□□□ -0.59
NCKIPSD-208ENST00000454134 TRAV8-1A0A0A6YYK1 113 aa11.36□□□□□ -0.59
NCKIPSD-208ENST00000454134 TMEM183BQ1AE95 376 aa11.36□□□□□ -0.59
NCKIPSD-208ENST00000454134 FAM74A1Q5RGS3 127 aa11.36□□□□□ -0.59
NCKIPSD-208ENST00000454134 Q6AWC8 147 aa11.36□□□□□ -0.59
NCKIPSD-208ENST00000454134 ZNF575Q86XF7 245 aa11.36□□□□□ -0.59
NCKIPSD-208ENST00000454134 TMEM183AQ8IXX5 376 aa11.36□□□□□ -0.59
NCKIPSD-208ENST00000454134 KRTAP17-1Q9BYP8 105 aa11.36□□□□□ -0.59
NCKIPSD-208ENST00000454134 NAGKQ9UJ70 344 aa11.36□□□□□ -0.59
NCKIPSD-208ENST00000454134 MRPS16Q9Y3D3 137 aaKnown RBP11.36□□□□□ -0.59
NCKIPSD-208ENST00000454134 F6UZH7 168 aa11.35□□□□□ -0.59
NCKIPSD-208ENST00000454134 PAX4O43316 350 aa11.35□□□□□ -0.59
NCKIPSD-208ENST00000454134 ATP6V0CP27449 155 aa11.35□□□□□ -0.59
NCKIPSD-208ENST00000454134 CDC34P49427 236 aaPredicted RBP11.35□□□□□ -0.59
NCKIPSD-208ENST00000454134 FAM159AQ6UWV7 190 aa11.35□□□□□ -0.59
NCKIPSD-208ENST00000454134 OR2G3Q8NGZ4 309 aa11.35□□□□□ -0.59
NCKIPSD-208ENST00000454134 TMED6Q8WW62 240 aa11.35□□□□□ -0.59
NCKIPSD-208ENST00000454134 TVP23CQ96ET8 276 aa11.35□□□□□ -0.59
NCKIPSD-208ENST00000454134 UPK3BQ9BT76 320 aa11.35□□□□□ -0.59
NCKIPSD-208ENST00000454134 SH3BGRL3Q9H299 93 aa11.35□□□□□ -0.59
NCKIPSD-208ENST00000454134 MED14OSP0DP75 135 aa11.34□□□□□ -0.59
NCKIPSD-208ENST00000454134 RAB24Q969Q5 203 aa11.34□□□□□ -0.59
NCKIPSD-208ENST00000454134 SGK494Q96LW2 274 aa11.34□□□□□ -0.59
NCKIPSD-208ENST00000454134 C8orf49Q96NF6 230 aa11.34□□□□□ -0.59
NCKIPSD-208ENST00000454134 GIPP09681 153 aaPredicted RBP11.33□□□□□ -0.6
NCKIPSD-208ENST00000454134 SFTA3P0C7M3 94 aa11.33□□□□□ -0.6
NCKIPSD-208ENST00000454134 STAG3L2P0CL84 134 aa11.33□□□□□ -0.6
NCKIPSD-208ENST00000454134 STAG3L3P0CL85 134 aa11.33□□□□□ -0.6
NCKIPSD-208ENST00000454134 CRYBA4P53673 196 aa11.33□□□□□ -0.6
NCKIPSD-208ENST00000454134 FHL2Q14192 279 aa11.33□□□□□ -0.6
NCKIPSD-208ENST00000454134 PSMG3Q9BT73 122 aaPredicted RBP11.33□□□□□ -0.6
NCKIPSD-208ENST00000454134 TREM1Q9NP99 234 aa11.33□□□□□ -0.6
NCKIPSD-208ENST00000454134 PRO0255Q9UI72 69 aa11.33□□□□□ -0.6
NCKIPSD-208ENST00000454134 HHLA3Q9XRX5 114 aa11.33□□□□□ -0.6
NCKIPSD-208ENST00000454134 ICOSQ9Y6W8 199 aa11.33□□□□□ -0.6
NCKIPSD-208ENST00000454134 TRGV11A0A075B6L2 103 aa11.32□□□□□ -0.6
NCKIPSD-208ENST00000454134 GNRH2O43555 120 aa11.32□□□□□ -0.6
NCKIPSD-208ENST00000454134 GCHFRP30047 84 aa11.32□□□□□ -0.6
NCKIPSD-208ENST00000454134 TTC32Q5I0X7 151 aa11.32□□□□□ -0.6
NCKIPSD-208ENST00000454134 ARL6IP6Q8N6S5 226 aa11.32□□□□□ -0.6
NCKIPSD-208ENST00000454134 FXYD6-FXYD2A0A087WZ82 144 aa11.31□□□□□ -0.6
NCKIPSD-208ENST00000454134 TRGV4A0A0C4DH28 118 aa11.31□□□□□ -0.6
NCKIPSD-208ENST00000454134 RNF222A6NCQ9 220 aa11.31□□□□□ -0.6
NCKIPSD-208ENST00000454134 RPL7L1Q6DKI1 246 aaKnown RBP11.31□□□□□ -0.6
NCKIPSD-208ENST00000454134 INO80EQ8NBZ0 244 aaPredicted RBP11.31□□□□□ -0.6
NCKIPSD-208ENST00000454134 ZNF479Q96JC4 524 aa11.31□□□□□ -0.6
NCKIPSD-208ENST00000454134 SPXQ9BT56 116 aa11.31□□□□□ -0.6
NCKIPSD-208ENST00000454134 TRAV21A0A0B4J279 112 aa11.3□□□□□ -0.6
NCKIPSD-208ENST00000454134 IGHV3-16A0A0C4DH30 117 aa11.3□□□□□ -0.6
NCKIPSD-208ENST00000454134 MBP02144 154 aa11.3□□□□□ -0.6
NCKIPSD-208ENST00000454134 SERF2P84101 59 aa11.3□□□□□ -0.6
NCKIPSD-208ENST00000454134 SLAQ13239 276 aa11.3□□□□□ -0.6
NCKIPSD-208ENST00000454134 TDRG1Q3Y452 100 aa11.3□□□□□ -0.6
NCKIPSD-208ENST00000454134 SUN5Q8TC36 379 aa11.3□□□□□ -0.6
NCKIPSD-208ENST00000454134 RASL10AQ92737 203 aa11.3□□□□□ -0.6
NCKIPSD-208ENST00000454134 DYNC1H1Q14204 4646 aaKnown RBP11.29□□□□□ -0.6
NCKIPSD-208ENST00000454134 GGTLC3B5MD39 225 aa11.29□□□□□ -0.6
NCKIPSD-208ENST00000454134 TCRAP04437 139 aa11.29□□□□□ -0.6
NCKIPSD-208ENST00000454134 TYMSP04818 313 aa11.29□□□□□ -0.6
NCKIPSD-208ENST00000454134 SUMO1P63165 101 aaKnown RBP11.29□□□□□ -0.6
NCKIPSD-208ENST00000454134 IQCF2Q8IXL9 164 aa11.29□□□□□ -0.6
NCKIPSD-208ENST00000454134 C5orf17Q8NAS9 161 aa11.29□□□□□ -0.6
NCKIPSD-208ENST00000454134 OR2T35Q8NGX2 323 aa11.29□□□□□ -0.6
NCKIPSD-208ENST00000454134 ASB13Q8WXK3 278 aa11.29□□□□□ -0.6
NCKIPSD-208ENST00000454134 ACTR3CQ9C0K3 210 aaPredicted RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 125.6 ms