RNA–Protein interactions for RNA: ENST00000448530.5

VCP-203, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 950 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-203ENST00000448530 MED28Q9H204 178 aa13.69□□□□□ -0.22
VCP-203ENST00000448530 Q9H8V8 135 aa13.69□□□□□ -0.22
VCP-203ENST00000448530 OTORQ9NRC9 128 aa13.69□□□□□ -0.22
VCP-203ENST00000448530 TP53TG3Q9ULZ0 132 aa13.69□□□□□ -0.22
VCP-203ENST00000448530 LENEPQ9Y5L5 61 aa13.69□□□□□ -0.22
VCP-203ENST00000448530 RPH3ALQ9UNE2 315 aa13.68□□□□□ -0.22
VCP-203ENST00000448530 DNAH17Q9UFH2 4485 aa13.68□□□□□ -0.22
VCP-203ENST00000448530 PGPA6NDG6 321 aa13.67□□□□□ -0.22
VCP-203ENST00000448530 EIF3GO75821 320 aaKnown RBP eCLIP13.67□□□□□ -0.226e-7■■■■■ 42.9
VCP-203ENST00000448530 RAB2AP61019 212 aa13.67□□□□□ -0.22
VCP-203ENST00000448530 ESRGQ1W209 222 aa13.67□□□□□ -0.22
VCP-203ENST00000448530 TTC32Q5I0X7 151 aa13.67□□□□□ -0.22
VCP-203ENST00000448530 MUC21Q5SSG8 566 aa13.67□□□□□ -0.22
VCP-203ENST00000448530 Q6ZQT7 251 aa13.67□□□□□ -0.22
VCP-203ENST00000448530 OR10G4Q8NGN3 311 aa13.67□□□□□ -0.22
VCP-203ENST00000448530 OR10G9Q8NGN4 311 aa13.67□□□□□ -0.22
VCP-203ENST00000448530 OR10G7Q8NGN6 311 aa13.67□□□□□ -0.22
VCP-203ENST00000448530 MRPL16Q9NX20 251 aaKnown RBP13.67□□□□□ -0.22
VCP-203ENST00000448530 FAT2Q9NYQ8 4349 aa13.67□□□□□ -0.22
VCP-203ENST00000448530 MUC4Q99102 2169 aa13.66□□□□□ -0.22
VCP-203ENST00000448530 FAM159AQ6UWV7 190 aa13.66□□□□□ -0.22
VCP-203ENST00000448530 VSIG2Q96IQ7 327 aa13.66□□□□□ -0.22
VCP-203ENST00000448530 ST6GAL2Q96JF0 529 aa13.66□□□□□ -0.22
VCP-203ENST00000448530 PAX4O43316 350 aa13.65□□□□□ -0.22
VCP-203ENST00000448530 IGHV3-53P01767 116 aa13.65□□□□□ -0.22
VCP-203ENST00000448530 MED14OSP0DP75 135 aa13.65□□□□□ -0.22
VCP-203ENST00000448530 TMED6Q8WW62 240 aa13.65□□□□□ -0.22
VCP-203ENST00000448530 MRPS16Q9Y3D3 137 aaKnown RBP13.65□□□□□ -0.22
VCP-203ENST00000448530 HERC2O95714 4834 aa13.65□□□□□ -0.22
VCP-203ENST00000448530 HMGB3O15347 200 aaKnown RBP13.64□□□□□ -0.23
VCP-203ENST00000448530 SLAQ13239 276 aa13.64□□□□□ -0.23
VCP-203ENST00000448530 Q6AWC8 147 aa13.64□□□□□ -0.23
VCP-203ENST00000448530 GOLT1AQ6ZVE7 132 aa13.64□□□□□ -0.23
VCP-203ENST00000448530 ARL6IP6Q8N6S5 226 aa13.64□□□□□ -0.23
VCP-203ENST00000448530 HSD17B11Q8NBQ5 300 aa13.64□□□□□ -0.23
VCP-203ENST00000448530 UPK3BQ9BT76 320 aa13.64□□□□□ -0.23
VCP-203ENST00000448530 TRGV11A0A075B6L2 103 aa13.63□□□□□ -0.23
VCP-203ENST00000448530 A0A096LPF7 62 aa13.63□□□□□ -0.23
VCP-203ENST00000448530 CDC34P49427 236 aaPredicted RBP13.63□□□□□ -0.23
VCP-203ENST00000448530 TNP2Q05952 138 aa13.63□□□□□ -0.23
VCP-203ENST00000448530 TMEM183BQ1AE95 376 aa13.63□□□□□ -0.23
VCP-203ENST00000448530 TMEM183AQ8IXX5 376 aa13.63□□□□□ -0.23
VCP-203ENST00000448530 AQP10Q96PS8 301 aa13.63□□□□□ -0.23
VCP-203ENST00000448530 PRO0255Q9UI72 69 aa13.63□□□□□ -0.23
VCP-203ENST00000448530 NAGKQ9UJ70 344 aa13.63□□□□□ -0.23
VCP-203ENST00000448530 ICOSQ9Y6W8 199 aa13.63□□□□□ -0.23
VCP-203ENST00000448530 KIAA1109Q2LD37 5005 aa13.63□□□□□ -0.23
VCP-203ENST00000448530 SPXQ9BT56 116 aa13.62□□□□□ -0.23
VCP-203ENST00000448530 MDFICQ9P1T7 246 aa13.62□□□□□ -0.23
VCP-203ENST00000448530 TRGV4A0A0C4DH28 118 aa13.61□□□□□ -0.23
VCP-203ENST00000448530 MBP02144 154 aa13.61□□□□□ -0.23
VCP-203ENST00000448530 ARL14EPLP0DKL9 152 aa13.61□□□□□ -0.23
VCP-203ENST00000448530 INO80EQ8NBZ0 244 aaPredicted RBP13.61□□□□□ -0.23
VCP-203ENST00000448530 OR2G3Q8NGZ4 309 aa13.61□□□□□ -0.23
VCP-203ENST00000448530 ASB13Q8WXK3 278 aa13.61□□□□□ -0.23
VCP-203ENST00000448530 PSMG3Q9BT73 122 aaPredicted RBP13.61□□□□□ -0.23
VCP-203ENST00000448530 HHLA3Q9XRX5 114 aa13.61□□□□□ -0.23
VCP-203ENST00000448530 PKHD1P08F94 4074 aa13.6□□□□□ -0.23
VCP-203ENST00000448530 A0A1W2PPQ1 181 aa13.6□□□□□ -0.23
VCP-203ENST00000448530 GIPP09681 153 aaPredicted RBP13.6□□□□□ -0.23
VCP-203ENST00000448530 C8orf49Q96NF6 230 aa13.6□□□□□ -0.23
VCP-203ENST00000448530 NDFIP1Q9BT67 221 aa13.6□□□□□ -0.23
VCP-203ENST00000448530 TREM1Q9NP99 234 aa13.6□□□□□ -0.23
VCP-203ENST00000448530 TRAV21A0A0B4J279 112 aa13.59□□□□□ -0.23
VCP-203ENST00000448530 STAG3L2P0CL84 134 aa13.59□□□□□ -0.23
VCP-203ENST00000448530 STAG3L3P0CL85 134 aa13.59□□□□□ -0.23
VCP-203ENST00000448530 ATP6V0CP27449 155 aa13.59□□□□□ -0.23
VCP-203ENST00000448530 GNG5P63218 68 aa13.59□□□□□ -0.23
VCP-203ENST00000448530 SERF2P84101 59 aa13.59□□□□□ -0.23
VCP-203ENST00000448530 ZNF575Q86XF7 245 aa13.59□□□□□ -0.23
VCP-203ENST00000448530 RAB24Q969Q5 203 aa13.59□□□□□ -0.23
VCP-203ENST00000448530 PKD1P98161 4303 aa13.59□□□□□ -0.23
VCP-203ENST00000448530 TRAV8-1A0A0A6YYK1 113 aa13.58□□□□□ -0.24
VCP-203ENST00000448530 SERTM2A0A1B0GWG4 89 aa13.58□□□□□ -0.24
VCP-203ENST00000448530 F6UZH7 168 aa13.58□□□□□ -0.24
VCP-203ENST00000448530 K7EQM0 130 aa13.58□□□□□ -0.24
VCP-203ENST00000448530 CRYBA4P53673 196 aa13.58□□□□□ -0.24
VCP-203ENST00000448530 FHL2Q14192 279 aa13.58□□□□□ -0.24
VCP-203ENST00000448530 MRPL23Q16540 153 aaKnown RBP13.58□□□□□ -0.24
VCP-203ENST00000448530 TDRG1Q3Y452 100 aa13.58□□□□□ -0.24
VCP-203ENST00000448530 GCHFRP30047 84 aa13.57□□□□□ -0.24
VCP-203ENST00000448530 C5orf17Q8NAS9 161 aa13.57□□□□□ -0.24
VCP-203ENST00000448530 RASL10AQ92737 203 aa13.57□□□□□ -0.24
VCP-203ENST00000448530 KRTAP1-5Q9BYS1 174 aa13.57□□□□□ -0.24
VCP-203ENST00000448530 ACTR3CQ9C0K3 210 aaPredicted RBP13.57□□□□□ -0.24
VCP-203ENST00000448530 FXYD6-FXYD2A0A087WZ82 144 aa13.56□□□□□ -0.24
VCP-203ENST00000448530 BORCS7-ASMTA0A0B4J1R7 106 aa13.56□□□□□ -0.24
VCP-203ENST00000448530 C16orf90A8MZG2 172 aa13.56□□□□□ -0.24
VCP-203ENST00000448530 SIVA1O15304 175 aa13.56□□□□□ -0.24
VCP-203ENST00000448530 CXorf1O96002 111 aa13.56□□□□□ -0.24
VCP-203ENST00000448530 BTF3P20290 206 aaKnown RBP13.56□□□□□ -0.24
VCP-203ENST00000448530 PCNPQ8WW12 178 aaKnown RBP13.56□□□□□ -0.24
VCP-203ENST00000448530 KCNS1Q96KK3 526 aa13.56□□□□□ -0.24
VCP-203ENST00000448530 SH3BGRL3Q9H299 93 aa13.56□□□□□ -0.24
VCP-203ENST00000448530 SDF2L1Q9HCN8 221 aa13.56□□□□□ -0.24
VCP-203ENST00000448530 TMEM167BQ9NRX6 74 aa13.56□□□□□ -0.24
VCP-203ENST00000448530 TNFSF18Q9UNG2 199 aa13.56□□□□□ -0.24
VCP-203ENST00000448530 GNRH2O43555 120 aa13.55□□□□□ -0.24
VCP-203ENST00000448530 NXPH4O95158 308 aa13.55□□□□□ -0.24
VCP-203ENST00000448530 SFTA3P0C7M3 94 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms