RNA–Protein interactions for RNA: ENST00000444814.2

LTBR-204, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 1,553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-204ENST00000444814 SPINK13Q1W4C9 94 aa8.9□□□□□ -0.98
LTBR-204ENST00000444814 ZNF705AQ6ZN79 300 aaPredicted RBP8.9□□□□□ -0.98
LTBR-204ENST00000444814 C9orf62Q8N4C0 152 aa8.9□□□□□ -0.98
LTBR-204ENST00000444814 STOML3Q8TAV4 291 aa8.9□□□□□ -0.98
LTBR-204ENST00000444814 OTORQ9NRC9 128 aa8.9□□□□□ -0.98
LTBR-204ENST00000444814 TGP01266 2768 aa8.9□□□□□ -0.98
LTBR-204ENST00000444814 PRKDCP78527 4128 aaKnown RBP8.9□□□□□ -0.99
LTBR-204ENST00000444814 IGHV4-28A0A0C4DH34 117 aa8.9□□□□□ -0.99
LTBR-204ENST00000444814 ZNF705FA8MVS1 300 aaPredicted RBP8.9□□□□□ -0.99
LTBR-204ENST00000444814 UMAD1C9J7I0 102 aa8.9□□□□□ -0.99
LTBR-204ENST00000444814 NPIPB6E9PJ23 425 aa8.9□□□□□ -0.99
LTBR-204ENST00000444814 BCL2L11O43521 198 aa8.9□□□□□ -0.99
LTBR-204ENST00000444814 NDUFB4O95168 129 aa8.9□□□□□ -0.99
LTBR-204ENST00000444814 SLC25A5P05141 298 aaKnown RBP8.9□□□□□ -0.99
LTBR-204ENST00000444814 ZNF705DP0CH99 300 aaPredicted RBP8.9□□□□□ -0.99
LTBR-204ENST00000444814 ZNF705BP0CI00 300 aaPredicted RBP8.9□□□□□ -0.99
LTBR-204ENST00000444814 MALP21145 153 aa8.9□□□□□ -0.99
LTBR-204ENST00000444814 CASC10Q5T4H9 136 aa8.9□□□□□ -0.99
LTBR-204ENST00000444814 RNASEKQ6P5S7 137 aaKnown RBP8.9□□□□□ -0.99
LTBR-204ENST00000444814 AMTNQ6UX39 209 aa8.9□□□□□ -0.99
LTBR-204ENST00000444814 ZNF471Q9BX82 626 aaPredicted RBP8.9□□□□□ -0.99
LTBR-204ENST00000444814 Q9H3A6 140 aa8.9□□□□□ -0.99
LTBR-204ENST00000444814 CTXND1A0A1B0GTU2 59 aa8.89□□□□□ -0.99
LTBR-204ENST00000444814 RBAKDNA6NC62 111 aa8.89□□□□□ -0.99
LTBR-204ENST00000444814 C11orf94C9JXX5 98 aa8.89□□□□□ -0.99
LTBR-204ENST00000444814 M0R2Z0 102 aa8.89□□□□□ -0.99
LTBR-204ENST00000444814 PPBPP02775 128 aa8.89□□□□□ -0.99
LTBR-204ENST00000444814 NMBP08949 121 aa8.89□□□□□ -0.99
LTBR-204ENST00000444814 COX19Q49B96 90 aa8.89□□□□□ -0.99
LTBR-204ENST00000444814 EXOC3-AS1Q8N2X6 119 aa8.89□□□□□ -0.99
LTBR-204ENST00000444814 Q8NAQ8 132 aa8.89□□□□□ -0.99
LTBR-204ENST00000444814 LINC01587Q99440 93 aa8.89□□□□□ -0.99
LTBR-204ENST00000444814 NIPSNAP3BQ9BS92 247 aa8.89□□□□□ -0.99
LTBR-204ENST00000444814 NKX6-2Q9C056 277 aaPredicted RBP8.89□□□□□ -0.99
LTBR-204ENST00000444814 X6R8D5 127 aa8.89□□□□□ -0.99
LTBR-204ENST00000444814 TRAV26-1A0A087WT03 109 aa8.88□□□□□ -0.99
LTBR-204ENST00000444814 TRBV7-9A0A0J9YWB2 115 aa8.88□□□□□ -0.99
LTBR-204ENST00000444814 A0A1B0GV72 72 aa8.88□□□□□ -0.99
LTBR-204ENST00000444814 H7BYZ3 331 aa8.88□□□□□ -0.99
LTBR-204ENST00000444814 SNAI2O43623 268 aa8.88□□□□□ -0.99
LTBR-204ENST00000444814 SEC11BP0C7V7 166 aa8.88□□□□□ -0.99
LTBR-204ENST00000444814 SPART-AS1P0CW21 52 aa8.88□□□□□ -0.99
LTBR-204ENST00000444814 ARL14EPLP0DKL9 152 aa8.88□□□□□ -0.99
LTBR-204ENST00000444814 TPT1P13693 172 aaKnown RBP8.88□□□□□ -0.99
LTBR-204ENST00000444814 HERV-K104P63124 156 aa8.88□□□□□ -0.99
LTBR-204ENST00000444814 BLOC1S1P78537 153 aa8.88□□□□□ -0.99
LTBR-204ENST00000444814 ZFAND6Q6FIF0 208 aa8.88□□□□□ -0.99
LTBR-204ENST00000444814 RPP25LQ8N5L8 163 aaKnown RBP8.88□□□□□ -0.99
LTBR-204ENST00000444814 PHYHIPLQ96FC7 376 aa8.88□□□□□ -0.99
LTBR-204ENST00000444814 SH3BGRL3Q9H299 93 aa8.88□□□□□ -0.99
LTBR-204ENST00000444814 M0R3E3 92 aa8.87□□□□□ -0.99
LTBR-204ENST00000444814 GCHFRP30047 84 aa8.87□□□□□ -0.99
LTBR-204ENST00000444814 LGALSLQ3ZCW2 172 aaPredicted RBP8.87□□□□□ -0.99
LTBR-204ENST00000444814 DPPA3Q6W0C5 159 aa8.87□□□□□ -0.99
LTBR-204ENST00000444814 C9orf47Q6ZRZ4 202 aa8.87□□□□□ -0.99
LTBR-204ENST00000444814 LENEPQ9Y5L5 61 aa8.87□□□□□ -0.99
LTBR-204ENST00000444814 LOC102723971A0A1B0GUV8 181 aa8.86□□□□□ -0.99
LTBR-204ENST00000444814 PGPA6NDG6 321 aa8.86□□□□□ -0.99
LTBR-204ENST00000444814 ZNF138P52744 262 aa8.86□□□□□ -0.99
LTBR-204ENST00000444814 ZNF493Q6ZR52 646 aa8.86□□□□□ -0.99
LTBR-204ENST00000444814 TMUB2Q71RG4 321 aa8.86□□□□□ -0.99
LTBR-204ENST00000444814 BAP18Q8IXM2 172 aa8.86□□□□□ -0.99
LTBR-204ENST00000444814 NDFIP1Q9BT67 221 aa8.86□□□□□ -0.99
LTBR-204ENST00000444814 PRAC2D3DTV9 90 aa8.86□□□□□ -0.99
LTBR-204ENST00000444814 HMGB3O15347 200 aaKnown RBP8.86□□□□□ -0.99
LTBR-204ENST00000444814 GPX1P07203 203 aa8.86□□□□□ -0.99
LTBR-204ENST00000444814 PPT1P50897 306 aa8.86□□□□□ -0.99
LTBR-204ENST00000444814 TCTAP57738 103 aa8.86□□□□□ -0.99
LTBR-204ENST00000444814 C1orf158Q8N1D5 194 aa8.86□□□□□ -0.99
LTBR-204ENST00000444814 C5orf17Q8NAS9 161 aa8.86□□□□□ -0.99
LTBR-204ENST00000444814 TMED6Q8WW62 240 aa8.86□□□□□ -0.99
LTBR-204ENST00000444814 ZNF503Q96F45 646 aa8.86□□□□□ -0.99
LTBR-204ENST00000444814 C16orf74Q96GX8 76 aa8.86□□□□□ -0.99
LTBR-204ENST00000444814 PYGO2Q9BRQ0 406 aa8.86□□□□□ -0.99
LTBR-204ENST00000444814 TCEAL7Q9BRU2 100 aa8.86□□□□□ -0.99
LTBR-204ENST00000444814 CYTL1Q9NRR1 136 aa8.86□□□□□ -0.99
LTBR-204ENST00000444814 TRAV12-2A0A075B6T6 113 aa8.85□□□□□ -0.99
LTBR-204ENST00000444814 DEFB4AO15263 64 aa8.85□□□□□ -0.99
LTBR-204ENST00000444814 S100A8P05109 93 aa8.85□□□□□ -0.99
LTBR-204ENST00000444814 CT45A10P0DMU9 189 aa8.85□□□□□ -0.99
LTBR-204ENST00000444814 RAB5CP51148 216 aa8.85□□□□□ -0.99
LTBR-204ENST00000444814 FGF8P55075 233 aaPredicted RBP8.85□□□□□ -0.99
LTBR-204ENST00000444814 CEMP1Q6PRD7 247 aaPredicted RBP8.85□□□□□ -0.99
LTBR-204ENST00000444814 ZNF492Q9P255 531 aa8.85□□□□□ -0.99
LTBR-204ENST00000444814 TRAV10A0A0B4J240 114 aa8.84□□□□□ -0.99
LTBR-204ENST00000444814 A0A1W2PRE2 83 aa8.84□□□□□ -0.99
LTBR-204ENST00000444814 C7orf71A4D174 169 aa8.84□□□□□ -0.99
LTBR-204ENST00000444814 MAP1LC3B2A6NCE7 125 aa8.84□□□□□ -0.99
LTBR-204ENST00000444814 DIRC3C9JPN6 131 aa8.84□□□□□ -0.99
LTBR-204ENST00000444814 F6UZH7 168 aa8.84□□□□□ -0.99
LTBR-204ENST00000444814 CRXO43186 299 aaPredicted RBP8.84□□□□□ -0.99
LTBR-204ENST00000444814 RBMY1A1P0DJD3 496 aaKnown RBP8.84□□□□□ -0.99
LTBR-204ENST00000444814 RBMY1CP0DJD4 496 aa8.84□□□□□ -0.99
LTBR-204ENST00000444814 CRISP2P16562 243 aa8.84□□□□□ -0.99
LTBR-204ENST00000444814 EMP1P54849 157 aa8.84□□□□□ -0.99
LTBR-204ENST00000444814 RBMY1FQ15415 496 aaKnown RBP8.84□□□□□ -0.99
LTBR-204ENST00000444814 PHLDA1Q8WV24 401 aaPredicted RBP8.84□□□□□ -0.99
LTBR-204ENST00000444814 MAP1LC3BQ9GZQ8 125 aa8.84□□□□□ -0.99
LTBR-204ENST00000444814 AGPAT4-IT1Q9H0P7 198 aa8.84□□□□□ -0.99
LTBR-204ENST00000444814 IGKV2-40A0A087WW87 121 aaPredicted RBP8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms