RNA–Protein interactions for RNA: ENST00000443621.1

LINC00393-201, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 282 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-201ENST00000443621 ZANQ9Y493 2812 aa2.14□□□□□ -2.07
LINC00393-201ENST00000443621 ITPR2Q14571 2701 aa2.13□□□□□ -2.07
LINC00393-201ENST00000443621 ZFHX3Q15911 3703 aa2.13□□□□□ -2.07
LINC00393-201ENST00000443621 MED13LQ71F56 2210 aa2.13□□□□□ -2.07
LINC00393-201ENST00000443621 ITPR3Q14573 2671 aa2.13□□□□□ -2.07
LINC00393-201ENST00000443621 IGHV4OR15-8A0A075B7B6 117 aa2.13□□□□□ -2.07
LINC00393-201ENST00000443621 IGHV3OR16-10A0A075B7F0 116 aa2.13□□□□□ -2.07
LINC00393-201ENST00000443621 A0A087WW49 117 aa2.13□□□□□ -2.07
LINC00393-201ENST00000443621 LOC102724200A0A096LPH7 203 aaPredicted RBP2.13□□□□□ -2.07
LINC00393-201ENST00000443621 TRAV8-1A0A0A6YYK1 113 aa2.13□□□□□ -2.07
LINC00393-201ENST00000443621 A0A0J9YX75 114 aa2.13□□□□□ -2.07
LINC00393-201ENST00000443621 C2orf70A6NJV1 201 aa2.13□□□□□ -2.07
LINC00393-201ENST00000443621 M0R381 172 aa2.13□□□□□ -2.07
LINC00393-201ENST00000443621 CRXO43186 299 aaPredicted RBP2.13□□□□□ -2.07
LINC00393-201ENST00000443621 CRLF1O75462 422 aa2.13□□□□□ -2.07
LINC00393-201ENST00000443621 EIF3GO75821 320 aaKnown RBP eCLIP2.13□□□□□ -2.07
LINC00393-201ENST00000443621 NXPH4O95158 308 aa2.13□□□□□ -2.07
LINC00393-201ENST00000443621 APCSP02743 223 aa2.13□□□□□ -2.07
LINC00393-201ENST00000443621 GPX1P07203 203 aa2.13□□□□□ -2.07
LINC00393-201ENST00000443621 LEPP41159 167 aa2.13□□□□□ -2.07
LINC00393-201ENST00000443621 CDKN1BP46527 198 aa2.13□□□□□ -2.07
LINC00393-201ENST00000443621 PROK1P58294 105 aa2.13□□□□□ -2.07
LINC00393-201ENST00000443621 SNRPEP62304 92 aaKnown RBP2.13□□□□□ -2.07
LINC00393-201ENST00000443621 GNG5P63218 68 aa2.13□□□□□ -2.07
LINC00393-201ENST00000443621 JOSD1Q15040 202 aaPredicted RBP2.13□□□□□ -2.07
LINC00393-201ENST00000443621 TCTEX1D4Q5JR98 221 aa2.13□□□□□ -2.07
LINC00393-201ENST00000443621 FAM104BQ5XKR9 115 aa2.13□□□□□ -2.07
LINC00393-201ENST00000443621 EBLN2Q6P2I7 272 aa2.13□□□□□ -2.07
LINC00393-201ENST00000443621 IL17RELQ6ZVW7 336 aa2.13□□□□□ -2.07
LINC00393-201ENST00000443621 SPATA12Q7Z6I5 190 aa2.13□□□□□ -2.07
LINC00393-201ENST00000443621 LINC00518Q8N0U6 118 aa2.13□□□□□ -2.07
LINC00393-201ENST00000443621 HIST3H2BBQ8N257 126 aa2.13□□□□□ -2.07
LINC00393-201ENST00000443621 TMEM256Q8N2U0 113 aa2.13□□□□□ -2.07
LINC00393-201ENST00000443621 POM121L12Q8N7R1 296 aa2.13□□□□□ -2.07
LINC00393-201ENST00000443621 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.13□□□□□ -2.07
LINC00393-201ENST00000443621 FER1L6-AS1Q8NA97 138 aa2.13□□□□□ -2.07
LINC00393-201ENST00000443621 OR11H1Q8NG94 326 aa2.13□□□□□ -2.07
LINC00393-201ENST00000443621 OR2D3Q8NGH3 330 aa2.13□□□□□ -2.07
LINC00393-201ENST00000443621 GTSF1Q8WW33 167 aa2.13□□□□□ -2.07
LINC00393-201ENST00000443621 RAX2Q96IS3 184 aa2.13□□□□□ -2.07
LINC00393-201ENST00000443621 TPPP3Q9BW30 176 aa2.13□□□□□ -2.07
LINC00393-201ENST00000443621 MS4A6AQ9H2W1 248 aa2.13□□□□□ -2.07
LINC00393-201ENST00000443621 YAE1D1Q9NRH1 226 aa2.13□□□□□ -2.07
LINC00393-201ENST00000443621 GSN-AS1Q9NRJ2 163 aa2.13□□□□□ -2.07
LINC00393-201ENST00000443621 U3KQK5 164 aa2.13□□□□□ -2.07
LINC00393-201ENST00000443621 CSPG4Q6UVK1 2322 aa2.13□□□□□ -2.07
LINC00393-201ENST00000443621 ZNF469Q96JG9 3925 aaPredicted RBP2.13□□□□□ -2.07
LINC00393-201ENST00000443621 AKAP9Q99996 3911 aa2.13□□□□□ -2.07
LINC00393-201ENST00000443621 DOPEY2Q9Y3R5 2298 aa2.12□□□□□ -2.07
LINC00393-201ENST00000443621 GCN1Q92616 2671 aaKnown RBP2.12□□□□□ -2.07
LINC00393-201ENST00000443621 C20orf202A1L168 122 aa2.12□□□□□ -2.07
LINC00393-201ENST00000443621 CCL24O00175 119 aa2.12□□□□□ -2.07
LINC00393-201ENST00000443621 SH2D1AO60880 128 aa2.12□□□□□ -2.07
LINC00393-201ENST00000443621 ZNF324O75467 553 aaPredicted RBP2.12□□□□□ -2.07
LINC00393-201ENST00000443621 IGLV1-51P01701 117 aa2.12□□□□□ -2.07
LINC00393-201ENST00000443621 TRBV12-3P01733 135 aa2.12□□□□□ -2.07
LINC00393-201ENST00000443621 IGHV3-23P01764 117 aa2.12□□□□□ -2.07
LINC00393-201ENST00000443621 CSN3P07498 182 aa2.12□□□□□ -2.07
LINC00393-201ENST00000443621 NPSP0C0P6 89 aa2.12□□□□□ -2.07
LINC00393-201ENST00000443621 HLA-DRB4P13762 266 aa2.12□□□□□ -2.07
LINC00393-201ENST00000443621 NDUFA6P56556 154 aa2.12□□□□□ -2.07
LINC00393-201ENST00000443621 NUTF2P61970 127 aaKnown RBP2.12□□□□□ -2.07
LINC00393-201ENST00000443621 KIR3DS1Q14943 382 aa2.12□□□□□ -2.07
LINC00393-201ENST00000443621 IQCJQ1A5X6 159 aa2.12□□□□□ -2.07
LINC00393-201ENST00000443621 DEFB114Q30KQ6 69 aa2.12□□□□□ -2.07
LINC00393-201ENST00000443621 ANXA2RQ3ZCQ2 193 aa2.12□□□□□ -2.07
LINC00393-201ENST00000443621 PRR27Q6MZM9 219 aa2.12□□□□□ -2.07
LINC00393-201ENST00000443621 MORN3Q6PF18 240 aaPredicted RBP2.12□□□□□ -2.07
LINC00393-201ENST00000443621 FAM159AQ6UWV7 190 aa2.12□□□□□ -2.07
LINC00393-201ENST00000443621 LINC00322Q6ZN03 302 aaPredicted RBP2.12□□□□□ -2.07
LINC00393-201ENST00000443621 MRPL52Q86TS9 123 aaKnown RBP2.12□□□□□ -2.07
LINC00393-201ENST00000443621 ZNF575Q86XF7 245 aa2.12□□□□□ -2.07
LINC00393-201ENST00000443621 AMN1Q8IY45 258 aa2.12□□□□□ -2.07
LINC00393-201ENST00000443621 ORMDL3Q8N138 153 aa2.12□□□□□ -2.07
LINC00393-201ENST00000443621 ZFP82Q8N141 532 aa2.12□□□□□ -2.07
LINC00393-201ENST00000443621 ZFAND2AQ8N6M9 145 aa2.12□□□□□ -2.07
LINC00393-201ENST00000443621 MAPK1IP1LQ8NDC0 245 aa2.12□□□□□ -2.07
LINC00393-201ENST00000443621 ZNF738Q8NE65 137 aa2.12□□□□□ -2.07
LINC00393-201ENST00000443621 C18orf32Q8TCD1 76 aa2.12□□□□□ -2.07
LINC00393-201ENST00000443621 MRAP2Q96G30 205 aa2.12□□□□□ -2.07
LINC00393-201ENST00000443621 SGK494Q96LW2 274 aa2.12□□□□□ -2.07
LINC00393-201ENST00000443621 HIST1H2BLQ99880 126 aa2.12□□□□□ -2.07
LINC00393-201ENST00000443621 VGLL1Q99990 258 aa2.12□□□□□ -2.07
LINC00393-201ENST00000443621 C20orf78Q9BR46 151 aa2.12□□□□□ -2.07
LINC00393-201ENST00000443621 ALKBH7Q9BT30 221 aaPredicted RBP2.12□□□□□ -2.07
LINC00393-201ENST00000443621 MCRIP2Q9BUT9 160 aaKnown RBP2.12□□□□□ -2.07
LINC00393-201ENST00000443621 C1QTNF4Q9BXJ3 329 aa2.12□□□□□ -2.07
LINC00393-201ENST00000443621 GPR61Q9BZJ8 451 aa2.12□□□□□ -2.07
LINC00393-201ENST00000443621 NXT2Q9NPJ8 142 aaKnown RBP2.12□□□□□ -2.07
LINC00393-201ENST00000443621 ESM1Q9NQ30 184 aa2.12□□□□□ -2.07
LINC00393-201ENST00000443621 NAGKQ9UJ70 344 aa2.12□□□□□ -2.07
LINC00393-201ENST00000443621 LINC00527Q9UJ94 153 aa2.12□□□□□ -2.07
LINC00393-201ENST00000443621 ZNF256Q9Y2P7 627 aaPredicted RBP2.12□□□□□ -2.07
LINC00393-201ENST00000443621 S4R3C0 116 aa2.12□□□□□ -2.07
LINC00393-201ENST00000443621 HLA-DRB4X5D2U9 266 aa2.12□□□□□ -2.07
LINC00393-201ENST00000443621 ABCA12Q86UK0 2595 aa2.12□□□□□ -2.07
LINC00393-201ENST00000443621 CSMD1Q96PZ7 3565 aa2.12□□□□□ -2.07
LINC00393-201ENST00000443621 OTOGQ6ZRI0 2925 aa2.11□□□□□ -2.07
LINC00393-201ENST00000443621 NBPF19A0A087WUL8 3843 aa2.11□□□□□ -2.07
LINC00393-201ENST00000443621 TRGV11A0A075B6L2 103 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 143.8 ms