RNA–Protein interactions for RNA: ENST00000442461.6

LIN54-202, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-202ENST00000442461 FAM167A-AS1Q96KT0 104 aa8.2□□□□□ -1.1
LIN54-202ENST00000442461 ICOSQ9Y6W8 199 aa8.2□□□□□ -1.1
LIN54-202ENST00000442461 XIRP1Q702N8 1843 aaKnown RBP8.19□□□□□ -1.1
LIN54-202ENST00000442461 MUSTN1Q8IVN3 82 aa8.19□□□□□ -1.1
LIN54-202ENST00000442461 PHLDA1Q8WV24 401 aaPredicted RBP8.19□□□□□ -1.1
LIN54-202ENST00000442461 ZNF503Q96F45 646 aa8.19□□□□□ -1.1
LIN54-202ENST00000442461 A0A087WWL8 130 aa8.19□□□□□ -1.1
LIN54-202ENST00000442461 TIMM23O14925 209 aa8.19□□□□□ -1.1
LIN54-202ENST00000442461 EGR2P11161 476 aaPredicted RBP8.19□□□□□ -1.1
LIN54-202ENST00000442461 RNF5Q99942 180 aa8.19□□□□□ -1.1
LIN54-202ENST00000442461 PLXNB2O15031 1838 aa8.19□□□□□ -1.1
LIN54-202ENST00000442461 IGLV2-8P01709 118 aa8.19□□□□□ -1.1
LIN54-202ENST00000442461 Q71RC1 249 aaPredicted RBP8.19□□□□□ -1.1
LIN54-202ENST00000442461 NRXN2Q9P2S2 1712 aa8.19□□□□□ -1.1
LIN54-202ENST00000442461 TRAV4A0A0B4J268 109 aa8.18□□□□□ -1.1
LIN54-202ENST00000442461 IGHV1-69DA0A0B4J2H0 117 aa8.18□□□□□ -1.1
LIN54-202ENST00000442461 TINCRA0A1B0GVN0 87 aa8.18□□□□□ -1.1
LIN54-202ENST00000442461 CRYGBP07316 175 aa8.18□□□□□ -1.1
LIN54-202ENST00000442461 ATP5J2P56134 94 aa8.18□□□□□ -1.1
LIN54-202ENST00000442461 LOXL1Q08397 574 aaPredicted RBP8.18□□□□□ -1.1
LIN54-202ENST00000442461 C1orf53Q5VUE5 145 aa8.18□□□□□ -1.1
LIN54-202ENST00000442461 TET1Q8NFU7 2136 aa8.18□□□□□ -1.1
LIN54-202ENST00000442461 COL5A3P25940 1745 aaPredicted RBP8.18□□□□□ -1.1
LIN54-202ENST00000442461 IGLC6P0CF74 106 aa8.18□□□□□ -1.1
LIN54-202ENST00000442461 CFAP126Q5VTH2 177 aa8.18□□□□□ -1.1
LIN54-202ENST00000442461 Q6ZSR3 168 aa8.18□□□□□ -1.1
LIN54-202ENST00000442461 MBD6Q96DN6 1003 aa8.18□□□□□ -1.1
LIN54-202ENST00000442461 C17orf100A8MU93 164 aa8.18□□□□□ -1.1
LIN54-202ENST00000442461 IGHG2P01859 326 aa8.18□□□□□ -1.1
LIN54-202ENST00000442461 Q6ZS92 163 aa8.18□□□□□ -1.1
LIN54-202ENST00000442461 JPT2Q9H910 190 aa8.18□□□□□ -1.1
LIN54-202ENST00000442461 PLXNB1O43157 2135 aa8.17□□□□□ -1.1
LIN54-202ENST00000442461 ZNF295-AS1Q8N0V1 137 aa8.17□□□□□ -1.1
LIN54-202ENST00000442461 CENPVL3A0A0U1RRI6 287 aa8.17□□□□□ -1.1
LIN54-202ENST00000442461 TEX49A0A1B0GTD5 131 aa8.17□□□□□ -1.1
LIN54-202ENST00000442461 C19orf71A6NCJ1 209 aa8.17□□□□□ -1.1
LIN54-202ENST00000442461 ADARB2-AS1A8MUL3 147 aa8.17□□□□□ -1.1
LIN54-202ENST00000442461 H3BRN7 92 aa8.17□□□□□ -1.1
LIN54-202ENST00000442461 M0R1W7 72 aa8.17□□□□□ -1.1
LIN54-202ENST00000442461 COL4A5P29400 1685 aa8.17□□□□□ -1.1
LIN54-202ENST00000442461 YLPM1P49750 1951 aaKnown RBP8.17□□□□□ -1.1
LIN54-202ENST00000442461 C15orf65H3BRN8 121 aa8.17□□□□□ -1.1
LIN54-202ENST00000442461 PLA2G5P39877 138 aa8.17□□□□□ -1.1
LIN54-202ENST00000442461 Q6Q795 121 aa8.16□□□□□ -1.1
LIN54-202ENST00000442461 TRAV13-2A0A0B4J235 113 aa8.16□□□□□ -1.1
LIN54-202ENST00000442461 IGHV1-3A0A0C4DH29 117 aa8.16□□□□□ -1.1
LIN54-202ENST00000442461 C15orf32Q32M92 178 aa8.16□□□□□ -1.1
LIN54-202ENST00000442461 TMEM200BQ69YZ2 307 aa8.16□□□□□ -1.1
LIN54-202ENST00000442461 PRSS22Q9GZN4 317 aa8.16□□□□□ -1.1
LIN54-202ENST00000442461 EML6Q6ZMW3 1958 aa8.16□□□□□ -1.1
LIN54-202ENST00000442461 ALPK3Q96L96 1907 aa8.16□□□□□ -1.1
LIN54-202ENST00000442461 hADV29S1A0JD25 119 aa8.16□□□□□ -1.1
LIN54-202ENST00000442461 VWCEQ96DN2 955 aa8.16□□□□□ -1.1
LIN54-202ENST00000442461 IMUPQ9GZP8 106 aa8.16□□□□□ -1.1
LIN54-202ENST00000442461 MSRB1Q9NZV6 116 aa8.16□□□□□ -1.1
LIN54-202ENST00000442461 SRSF2Q01130 221 aaKnown RBP8.15□□□□□ -1.1
LIN54-202ENST00000442461 PRB3Q04118 309 aaPredicted RBP8.15□□□□□ -1.1
LIN54-202ENST00000442461 PAX8Q06710 450 aa8.15□□□□□ -1.1
LIN54-202ENST00000442461 PATE2Q6UY27 113 aa8.15□□□□□ -1.1
LIN54-202ENST00000442461 PAPPA2Q9BXP8 1791 aa8.15□□□□□ -1.1
LIN54-202ENST00000442461 CACNA1BQ00975 2339 aa8.15□□□□□ -1.1
LIN54-202ENST00000442461 IGKV2D-26A0A0A0MRZ7 120 aa8.15□□□□□ -1.1
LIN54-202ENST00000442461 LINC00694P0DN24 101 aa8.15□□□□□ -1.1
LIN54-202ENST00000442461 C1orf159Q96HA4 380 aa8.15□□□□□ -1.1
LIN54-202ENST00000442461 ARRDC1-AS1Q9H2J1 176 aa8.15□□□□□ -1.1
LIN54-202ENST00000442461 IGHV1-8P0DP01 117 aa8.15□□□□□ -1.11
LIN54-202ENST00000442461 ZNF134P52741 427 aa8.15□□□□□ -1.11
LIN54-202ENST00000442461 GP9P14770 177 aa8.15□□□□□ -1.11
LIN54-202ENST00000442461 IGHV1-18A0A0C4DH31 117 aa8.14□□□□□ -1.11
LIN54-202ENST00000442461 IGHV1-46P01743 117 aa8.14□□□□□ -1.11
LIN54-202ENST00000442461 THBDP07204 575 aa8.14□□□□□ -1.11
LIN54-202ENST00000442461 PSMB8P28062 276 aa8.14□□□□□ -1.11
LIN54-202ENST00000442461 WDR86Q86TI4 376 aa8.14□□□□□ -1.11
LIN54-202ENST00000442461 FREM1Q5H8C1 2179 aa8.14□□□□□ -1.11
LIN54-202ENST00000442461 CRYGCP07315 174 aa8.14□□□□□ -1.11
LIN54-202ENST00000442461 C8orf31Q8N9H6 132 aa8.14□□□□□ -1.11
LIN54-202ENST00000442461 C17orf77Q96MU5 243 aa8.14□□□□□ -1.11
LIN54-202ENST00000442461 A0A0U1RQV1 116 aa8.14□□□□□ -1.11
LIN54-202ENST00000442461 I3L3M4 83 aa8.14□□□□□ -1.11
LIN54-202ENST00000442461 LTBRP36941 435 aa8.14□□□□□ -1.11
LIN54-202ENST00000442461 LINC01587Q99440 93 aa8.14□□□□□ -1.11
LIN54-202ENST00000442461 LGALS9O00182 355 aa8.13□□□□□ -1.11
LIN54-202ENST00000442461 B3GALT5-AS1P59052 145 aa8.13□□□□□ -1.11
LIN54-202ENST00000442461 ZNRD1Q9P1U0 126 aa8.13□□□□□ -1.11
LIN54-202ENST00000442461 EP300Q09472 2414 aaPredicted RBP8.13□□□□□ -1.11
LIN54-202ENST00000442461 CFHR1Q03591 330 aa8.13□□□□□ -1.11
LIN54-202ENST00000442461 MED13LQ71F56 2210 aa8.13□□□□□ -1.11
LIN54-202ENST00000442461 IGKV1OR2-108A0A075B7D4 117 aa8.13□□□□□ -1.11
LIN54-202ENST00000442461 PINLYPA6NC86 204 aa8.13□□□□□ -1.11
LIN54-202ENST00000442461 B9A039 149 aa8.13□□□□□ -1.11
LIN54-202ENST00000442461 SAP25Q8TEE9 199 aa8.13□□□□□ -1.11
LIN54-202ENST00000442461 GAFA1Q96PS6 74 aa8.13□□□□□ -1.11
LIN54-202ENST00000442461 MED13Q9UHV7 2174 aa8.13□□□□□ -1.11
LIN54-202ENST00000442461 TNCP24821 2201 aa8.12□□□□□ -1.11
LIN54-202ENST00000442461 PLXNA3P51805 1871 aa8.12□□□□□ -1.11
LIN54-202ENST00000442461 NCOA6Q14686 2063 aaPredicted RBP8.12□□□□□ -1.11
LIN54-202ENST00000442461 IGHV3-73A0A0B4J1V6 119 aa8.12□□□□□ -1.11
LIN54-202ENST00000442461 IGHV3-11P01762 117 aa8.12□□□□□ -1.11
LIN54-202ENST00000442461 KMT2EQ8IZD2 1858 aa8.12□□□□□ -1.11
LIN54-202ENST00000442461 COL11A2P13942 1736 aaPredicted RBP8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 137.7 ms