RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 COX7A2P2O60397 106 aa5.65□□□□□ -1.5
CDC42BPA-208ENST00000442054 TOMM40O96008 361 aa5.65□□□□□ -1.5
CDC42BPA-208ENST00000442054 FCGR2BP31994 310 aaPredicted RBP5.65□□□□□ -1.5
CDC42BPA-208ENST00000442054 COTL1Q14019 142 aa5.65□□□□□ -1.5
CDC42BPA-208ENST00000442054 EPDR1Q9UM22 224 aa5.65□□□□□ -1.5
CDC42BPA-208ENST00000442054 I3L2K1 104 aa5.65□□□□□ -1.5
CDC42BPA-208ENST00000442054 COX8CQ7Z4L0 72 aa5.65□□□□□ -1.5
CDC42BPA-208ENST00000442054 DAZ1Q9NQZ3 744 aaKnown RBP5.65□□□□□ -1.5
CDC42BPA-208ENST00000442054 F11RQ9Y624 299 aaKnown RBP5.65□□□□□ -1.5
CDC42BPA-208ENST00000442054 GNG5P63218 68 aa5.65□□□□□ -1.51
CDC42BPA-208ENST00000442054 TCF24Q7RTU0 167 aa5.65□□□□□ -1.51
CDC42BPA-208ENST00000442054 C16orf92Q96LL3 132 aa5.65□□□□□ -1.51
CDC42BPA-208ENST00000442054 GFRA4Q9GZZ7 299 aa5.65□□□□□ -1.51
CDC42BPA-208ENST00000442054 TMEM14CQ9P0S9 112 aa5.65□□□□□ -1.51
CDC42BPA-208ENST00000442054 NAT8BQ9UHF3 227 aa5.65□□□□□ -1.51
CDC42BPA-208ENST00000442054 PAM16Q9Y3D7 125 aa5.65□□□□□ -1.51
CDC42BPA-208ENST00000442054 CELSR1Q9NYQ6 3014 aa5.64□□□□□ -1.51
CDC42BPA-208ENST00000442054 TRAV34A0A0B4J273 112 aa5.64□□□□□ -1.51
CDC42BPA-208ENST00000442054 CMC4P56277 68 aaPredicted RBP5.64□□□□□ -1.51
CDC42BPA-208ENST00000442054 TAS2R45P59539 299 aa5.64□□□□□ -1.51
CDC42BPA-208ENST00000442054 FAM19A2Q8N3H0 131 aa5.64□□□□□ -1.51
CDC42BPA-208ENST00000442054 RHPN1-AS1Q9BWJ2 59 aa5.64□□□□□ -1.51
CDC42BPA-208ENST00000442054 AKAP9Q99996 3911 aa5.64□□□□□ -1.51
CDC42BPA-208ENST00000442054 PDZD2O15018 2839 aa5.64□□□□□ -1.51
CDC42BPA-208ENST00000442054 DIRC3C9JPN6 131 aa5.64□□□□□ -1.51
CDC42BPA-208ENST00000442054 F8W735 103 aaPredicted RBP5.64□□□□□ -1.51
CDC42BPA-208ENST00000442054 APCSP02743 223 aa5.64□□□□□ -1.51
CDC42BPA-208ENST00000442054 TCL1AP56279 114 aa5.64□□□□□ -1.51
CDC42BPA-208ENST00000442054 PAXXQ9BUH6 204 aa5.64□□□□□ -1.51
CDC42BPA-208ENST00000442054 RPH3ALQ9UNE2 315 aa5.64□□□□□ -1.51
CDC42BPA-208ENST00000442054 MRPS16Q9Y3D3 137 aaKnown RBP5.64□□□□□ -1.51
CDC42BPA-208ENST00000442054 OR7C2O60412 319 aa5.64□□□□□ -1.51
CDC42BPA-208ENST00000442054 CDKN1BP46527 198 aa5.64□□□□□ -1.51
CDC42BPA-208ENST00000442054 KLK9Q2XQG4 91 aa5.64□□□□□ -1.51
CDC42BPA-208ENST00000442054 MRPL54Q6P161 138 aaKnown RBP5.64□□□□□ -1.51
CDC42BPA-208ENST00000442054 LINC00305Q7Z4B0 112 aa5.64□□□□□ -1.51
CDC42BPA-208ENST00000442054 KLK9Q9UKQ9 250 aa5.64□□□□□ -1.51
CDC42BPA-208ENST00000442054 ZFP30Q9Y2G7 519 aa5.64□□□□□ -1.51
CDC42BPA-208ENST00000442054 A0A096LNJ9 63 aa5.63□□□□□ -1.51
CDC42BPA-208ENST00000442054 FAM231BA6NCW3 169 aa5.63□□□□□ -1.51
CDC42BPA-208ENST00000442054 IGLC1P0CG04 106 aa5.63□□□□□ -1.51
CDC42BPA-208ENST00000442054 CRIP1P50238 77 aa5.63□□□□□ -1.51
CDC42BPA-208ENST00000442054 UBE2L3P68036 154 aaKnown RBP5.63□□□□□ -1.51
CDC42BPA-208ENST00000442054 TIGITQ495A1 244 aa5.63□□□□□ -1.51
CDC42BPA-208ENST00000442054 C10orf113Q5VZT2 155 aa5.63□□□□□ -1.51
CDC42BPA-208ENST00000442054 VAMP8Q9BV40 100 aa5.63□□□□□ -1.51
CDC42BPA-208ENST00000442054 ZNF586Q9NXT0 402 aa5.63□□□□□ -1.51
CDC42BPA-208ENST00000442054 HIGD1CA8MV81 97 aa5.63□□□□□ -1.51
CDC42BPA-208ENST00000442054 CIDEAO60543 219 aa5.63□□□□□ -1.51
CDC42BPA-208ENST00000442054 SPINK4O60575 86 aa5.63□□□□□ -1.51
CDC42BPA-208ENST00000442054 EMP1P54849 157 aa5.63□□□□□ -1.51
CDC42BPA-208ENST00000442054 SPATA45Q537H7 98 aa5.63□□□□□ -1.51
CDC42BPA-208ENST00000442054 BAGE3Q86Y29 109 aa5.63□□□□□ -1.51
CDC42BPA-208ENST00000442054 BAGE2Q86Y30 109 aa5.63□□□□□ -1.51
CDC42BPA-208ENST00000442054 TTC9CQ8N5M4 171 aa5.63□□□□□ -1.51
CDC42BPA-208ENST00000442054 SRSF8Q9BRL6 282 aaKnown RBP5.63□□□□□ -1.51
CDC42BPA-208ENST00000442054 NPIPB5A8MRT5 1133 aa5.63□□□□□ -1.51
CDC42BPA-208ENST00000442054 PSMB8P28062 276 aa5.63□□□□□ -1.51
CDC42BPA-208ENST00000442054 TSPOP30536 169 aa5.63□□□□□ -1.51
CDC42BPA-208ENST00000442054 LINC00173Q6ZV60 143 aa5.63□□□□□ -1.51
CDC42BPA-208ENST00000442054 Q8N6K4 173 aa5.63□□□□□ -1.51
CDC42BPA-208ENST00000442054 OR1L4Q8NGR5 311 aa5.63□□□□□ -1.51
CDC42BPA-208ENST00000442054 NDFIP1Q9BT67 221 aa5.63□□□□□ -1.51
CDC42BPA-208ENST00000442054 IGKV1-17P01599 117 aa5.62□□□□□ -1.51
CDC42BPA-208ENST00000442054 TCRAP04437 139 aa5.62□□□□□ -1.51
CDC42BPA-208ENST00000442054 ZNF688P0C7X2 276 aa5.62□□□□□ -1.51
CDC42BPA-208ENST00000442054 ZNF25P17030 456 aaPredicted RBP5.62□□□□□ -1.51
CDC42BPA-208ENST00000442054 TP73-AS1Q9UF72 201 aa5.62□□□□□ -1.51
CDC42BPA-208ENST00000442054 IGHV1-24A0A0C4DH33 117 aa5.62□□□□□ -1.51
CDC42BPA-208ENST00000442054 HTN3P15516 51 aa5.62□□□□□ -1.51
CDC42BPA-208ENST00000442054 CSN1S1P47710 185 aa5.62□□□□□ -1.51
CDC42BPA-208ENST00000442054 GPR82Q96P67 336 aa5.62□□□□□ -1.51
CDC42BPA-208ENST00000442054 SSBP4Q9BWG4 385 aaPredicted RBP5.62□□□□□ -1.51
CDC42BPA-208ENST00000442054 CLEC5AQ9NY25 188 aa5.62□□□□□ -1.51
CDC42BPA-208ENST00000442054 U3KQK5 164 aa5.62□□□□□ -1.51
CDC42BPA-208ENST00000442054 LINC01546A6NGU7 62 aa5.62□□□□□ -1.51
CDC42BPA-208ENST00000442054 ZNF705FA8MVS1 300 aaPredicted RBP5.62□□□□□ -1.51
CDC42BPA-208ENST00000442054 K7EIM0 57 aa5.62□□□□□ -1.51
CDC42BPA-208ENST00000442054 ZNF705DP0CH99 300 aaPredicted RBP5.62□□□□□ -1.51
CDC42BPA-208ENST00000442054 ZNF705BP0CI00 300 aaPredicted RBP5.62□□□□□ -1.51
CDC42BPA-208ENST00000442054 Q86TA4 180 aa5.62□□□□□ -1.51
CDC42BPA-208ENST00000442054 FMC1Q96HJ9 113 aa5.62□□□□□ -1.51
CDC42BPA-208ENST00000442054 K7EP13 123 aa5.61□□□□□ -1.51
CDC42BPA-208ENST00000442054 AMTP48728 403 aa5.61□□□□□ -1.51
CDC42BPA-208ENST00000442054 APOC4P55056 127 aa5.61□□□□□ -1.51
CDC42BPA-208ENST00000442054 DEFB131AP59861 70 aa5.61□□□□□ -1.51
CDC42BPA-208ENST00000442054 CD300EQ496F6 205 aaPredicted RBP5.61□□□□□ -1.51
CDC42BPA-208ENST00000442054 LINC00482Q8N8I6 264 aa5.61□□□□□ -1.51
CDC42BPA-208ENST00000442054 RPP21Q9H633 154 aaKnown RBP5.61□□□□□ -1.51
CDC42BPA-208ENST00000442054 UQCR10Q9UDW1 63 aa5.61□□□□□ -1.51
CDC42BPA-208ENST00000442054 WI2-2373I1.2A0A1W2PRP0 233 aa5.61□□□□□ -1.51
CDC42BPA-208ENST00000442054 TRBV12-3P01733 135 aa5.61□□□□□ -1.51
CDC42BPA-208ENST00000442054 G0S2P27469 103 aa5.61□□□□□ -1.51
CDC42BPA-208ENST00000442054 Q8N2B8 174 aa5.61□□□□□ -1.51
CDC42BPA-208ENST00000442054 TRAV9-2A0A087WT02 112 aa5.61□□□□□ -1.51
CDC42BPA-208ENST00000442054 C20orf202A1L168 122 aa5.61□□□□□ -1.51
CDC42BPA-208ENST00000442054 CCL25O15444 150 aa5.61□□□□□ -1.51
CDC42BPA-208ENST00000442054 PTTG1IPP53801 180 aa5.61□□□□□ -1.51
CDC42BPA-208ENST00000442054 USF2Q15853 346 aaPredicted RBP5.61□□□□□ -1.51
CDC42BPA-208ENST00000442054 PSMG4Q5JS54 123 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 127.6 ms