RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 TRAV1-2A0A0B4J238 106 aa3.55□□□□□ -1.84
HMGB3P9-201ENST00000441799 CXorf51AA0A1B0GTR3 108 aa3.55□□□□□ -1.84
HMGB3P9-201ENST00000441799 C4orf51C9J302 202 aa3.55□□□□□ -1.84
HMGB3P9-201ENST00000441799 F2Z2F3 143 aa3.55□□□□□ -1.84
HMGB3P9-201ENST00000441799 ACYP1P07311 99 aa3.55□□□□□ -1.84
HMGB3P9-201ENST00000441799 ZNF136P52737 540 aa3.55□□□□□ -1.84
HMGB3P9-201ENST00000441799 RPS18P62269 152 aaKnown RBP3.55□□□□□ -1.84
HMGB3P9-201ENST00000441799 RPL23P62829 140 aaKnown RBP3.55□□□□□ -1.84
HMGB3P9-201ENST00000441799 ZNF791Q3KP31 576 aaPredicted RBP3.55□□□□□ -1.84
HMGB3P9-201ENST00000441799 C10orf25Q5T742 122 aa3.55□□□□□ -1.84
HMGB3P9-201ENST00000441799 EBLN2Q6P2I7 272 aa3.55□□□□□ -1.84
HMGB3P9-201ENST00000441799 C9orf47Q6ZRZ4 202 aa3.55□□□□□ -1.84
HMGB3P9-201ENST00000441799 C11orf72Q8NBR9 251 aa3.55□□□□□ -1.84
HMGB3P9-201ENST00000441799 TSKUQ8WUA8 353 aa3.55□□□□□ -1.84
HMGB3P9-201ENST00000441799 LRRC29Q8WV35 223 aa3.55□□□□□ -1.84
HMGB3P9-201ENST00000441799 PGLYRP4Q96LB8 373 aa3.55□□□□□ -1.84
HMGB3P9-201ENST00000441799 TRGV9Q99603 122 aa3.55□□□□□ -1.84
HMGB3P9-201ENST00000441799 CCL13Q99616 98 aa3.55□□□□□ -1.84
HMGB3P9-201ENST00000441799 FAM103A1Q9BTL3 118 aaKnown RBP3.55□□□□□ -1.84
HMGB3P9-201ENST00000441799 PLEKHA3Q9HB20 300 aa3.55□□□□□ -1.84
HMGB3P9-201ENST00000441799 CALYQ9NYX4 217 aa3.55□□□□□ -1.84
HMGB3P9-201ENST00000441799 LINC00588Q9Y4M8 146 aa3.55□□□□□ -1.84
HMGB3P9-201ENST00000441799 SLC25A15Q9Y619 301 aa3.55□□□□□ -1.84
HMGB3P9-201ENST00000441799 ARL2-SNX15V9GYD0 113 aa3.55□□□□□ -1.84
HMGB3P9-201ENST00000441799 MAP1BP46821 2468 aaKnown RBP3.55□□□□□ -1.84
HMGB3P9-201ENST00000441799 TICRRQ7Z2Z1 1910 aa3.54□□□□□ -1.84
HMGB3P9-201ENST00000441799 FAM186AA6NE01 2351 aa3.54□□□□□ -1.84
HMGB3P9-201ENST00000441799 ITPR1Q14643 2758 aa3.54□□□□□ -1.84
HMGB3P9-201ENST00000441799 PRRC2BQ5JSZ5 2229 aaKnown RBP3.54□□□□□ -1.84
HMGB3P9-201ENST00000441799 CEP295Q9C0D2 2601 aa3.54□□□□□ -1.84
HMGB3P9-201ENST00000441799 IGLV3-16A0A075B6K0 115 aa3.54□□□□□ -1.84
HMGB3P9-201ENST00000441799 IGKV1D-13A0A0B4J2D9 117 aa3.54□□□□□ -1.84
HMGB3P9-201ENST00000441799 CCL16O15467 120 aa3.54□□□□□ -1.84
HMGB3P9-201ENST00000441799 PRH1P02810 166 aa3.54□□□□□ -1.84
HMGB3P9-201ENST00000441799 RBMY1CP0DJD4 496 aa3.54□□□□□ -1.84
HMGB3P9-201ENST00000441799 IGHV4-31P0DP07 118 aa3.54□□□□□ -1.84
HMGB3P9-201ENST00000441799 IGKV1-13P0DP09 117 aa3.54□□□□□ -1.84
HMGB3P9-201ENST00000441799 HMGA1P17096 107 aaKnown RBP3.54□□□□□ -1.84
HMGB3P9-201ENST00000441799 ZNF80P51504 273 aaPredicted RBP3.54□□□□□ -1.84
HMGB3P9-201ENST00000441799 MP68P56378 58 aa3.54□□□□□ -1.84
HMGB3P9-201ENST00000441799 RNASE12Q5GAN4 147 aaKnown RBP3.54□□□□□ -1.84
HMGB3P9-201ENST00000441799 H1FXQ92522 213 aaKnown RBP3.54□□□□□ -1.84
HMGB3P9-201ENST00000441799 CNRIP1Q96F85 164 aaPredicted RBP3.54□□□□□ -1.84
HMGB3P9-201ENST00000441799 MAP6D1Q9H9H5 199 aa3.54□□□□□ -1.84
HMGB3P9-201ENST00000441799 ZNF286AQ9HBT8 521 aa3.54□□□□□ -1.84
HMGB3P9-201ENST00000441799 MOB4Q9Y3A3 225 aa3.54□□□□□ -1.84
HMGB3P9-201ENST00000441799 HILPDAQ9Y5L2 63 aa3.54□□□□□ -1.84
HMGB3P9-201ENST00000441799 SCN5AQ14524 2016 aa3.54□□□□□ -1.84
HMGB3P9-201ENST00000441799 GREB1Q4ZG55 1949 aa3.53□□□□□ -1.84
HMGB3P9-201ENST00000441799 DSPP15924 2871 aaKnown RBP3.53□□□□□ -1.84
HMGB3P9-201ENST00000441799 IGHV1OR21-1A0A087WYE8 117 aa3.53□□□□□ -1.84
HMGB3P9-201ENST00000441799 TMEM256-PLSCR3K7ERE1 68 aa3.53□□□□□ -1.84
HMGB3P9-201ENST00000441799 HBDP02042 147 aa3.53□□□□□ -1.84
HMGB3P9-201ENST00000441799 EFNA4P52798 201 aa3.53□□□□□ -1.84
HMGB3P9-201ENST00000441799 SEC61BP60468 96 aaKnown RBP3.53□□□□□ -1.84
HMGB3P9-201ENST00000441799 KIAA0087Q14695 138 aa3.53□□□□□ -1.84
HMGB3P9-201ENST00000441799 DEFB121Q5J5C9 76 aa3.53□□□□□ -1.84
HMGB3P9-201ENST00000441799 TMEM170BQ5T4T1 132 aa3.53□□□□□ -1.84
HMGB3P9-201ENST00000441799 MIC13Q5XKP0 118 aa3.53□□□□□ -1.84
HMGB3P9-201ENST00000441799 TMEM252Q8N6L7 170 aa3.53□□□□□ -1.84
HMGB3P9-201ENST00000441799 MAPKAPK5-AS1Q8N8E1 139 aa3.53□□□□□ -1.84
HMGB3P9-201ENST00000441799 RFESDQ8TAC1 157 aa3.53□□□□□ -1.84
HMGB3P9-201ENST00000441799 WFDC5Q8TCV5 224 aa3.53□□□□□ -1.84
HMGB3P9-201ENST00000441799 TAF15Q92804 592 aaKnown RBP eCLIP3.53□□□□□ -1.84
HMGB3P9-201ENST00000441799 TIMM17AQ99595 171 aa3.53□□□□□ -1.84
HMGB3P9-201ENST00000441799 PARP12Q9H0J9 701 aaKnown RBP3.53□□□□□ -1.84
HMGB3P9-201ENST00000441799 NXT2Q9NPJ8 142 aaKnown RBP3.53□□□□□ -1.84
HMGB3P9-201ENST00000441799 TP73-AS1Q9UF72 201 aa3.53□□□□□ -1.84
HMGB3P9-201ENST00000441799 SELENOKQ9Y6D0 94 aa3.53□□□□□ -1.84
HMGB3P9-201ENST00000441799 LOC400499M0QZD8 3231 aa3.53□□□□□ -1.84
HMGB3P9-201ENST00000441799 NAV2Q8IVL1 2488 aa3.52□□□□□ -1.85
HMGB3P9-201ENST00000441799 EP300Q09472 2414 aaPredicted RBP3.52□□□□□ -1.85
HMGB3P9-201ENST00000441799 HELZ2Q9BYK8 2649 aaKnown RBP3.52□□□□□ -1.85
HMGB3P9-201ENST00000441799 IGKV1D-43A0A0B4J1Z2 117 aa3.52□□□□□ -1.85
HMGB3P9-201ENST00000441799 LOC389332A0A1B0GUA5 103 aa3.52□□□□□ -1.85
HMGB3P9-201ENST00000441799 SNURFLB1AK76 121 aa3.52□□□□□ -1.85
HMGB3P9-201ENST00000441799 COX7A2LO14548 114 aa3.52□□□□□ -1.85
HMGB3P9-201ENST00000441799 PSPHP1O15172 72 aa3.52□□□□□ -1.85
HMGB3P9-201ENST00000441799 TRBV12-3P01733 135 aa3.52□□□□□ -1.85
HMGB3P9-201ENST00000441799 FCGR2CP31995 323 aa3.52□□□□□ -1.85
HMGB3P9-201ENST00000441799 NCBP2P52298 156 aaKnown RBP eCLIP3.52□□□□□ -1.85
HMGB3P9-201ENST00000441799 LINC00313P59037 77 aa3.52□□□□□ -1.85
HMGB3P9-201ENST00000441799 CCL20P78556 96 aa3.52□□□□□ -1.85
HMGB3P9-201ENST00000441799 FBXL19-AS1Q494R0 122 aa3.52□□□□□ -1.85
HMGB3P9-201ENST00000441799 ATP1A1-AS1Q5TC04 95 aa3.52□□□□□ -1.85
HMGB3P9-201ENST00000441799 C12orf73Q69YU5 71 aa3.52□□□□□ -1.85
HMGB3P9-201ENST00000441799 ZFP2Q6ZN57 461 aa3.52□□□□□ -1.85
HMGB3P9-201ENST00000441799 SDIM1Q6ZPB5 146 aa3.52□□□□□ -1.85
HMGB3P9-201ENST00000441799 LINC00643Q86TS7 51 aa3.52□□□□□ -1.85
HMGB3P9-201ENST00000441799 Q8N8P6 123 aa3.52□□□□□ -1.85
HMGB3P9-201ENST00000441799 VSIG2Q96IQ7 327 aa3.52□□□□□ -1.85
HMGB3P9-201ENST00000441799 SMIM7Q9BQ49 75 aa3.52□□□□□ -1.85
HMGB3P9-201ENST00000441799 C6orf106Q9H6K1 298 aaPredicted RBP3.52□□□□□ -1.85
HMGB3P9-201ENST00000441799 ZNF492Q9P255 531 aa3.52□□□□□ -1.85
HMGB3P9-201ENST00000441799 DOCK6Q96HP0 2047 aa3.52□□□□□ -1.85
HMGB3P9-201ENST00000441799 SCN8AQ9UQD0 1980 aa3.52□□□□□ -1.85
HMGB3P9-201ENST00000441799 CEP250Q9BV73 2442 aa3.52□□□□□ -1.85
HMGB3P9-201ENST00000441799 RALGAPA1Q6GYQ0 2036 aa3.51□□□□□ -1.85
HMGB3P9-201ENST00000441799 TECTAO75443 2155 aa3.51□□□□□ -1.85
HMGB3P9-201ENST00000441799 IBA57-AS1B1ANH7 110 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms