RNA–Protein interactions for RNA: ENST00000441350.2

VPS13B-204, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-204ENST00000441350 TSPOP30536 169 aa15.5■□□□□ 0.07
VPS13B-204ENST00000441350 ZNF80P51504 273 aaPredicted RBP15.5■□□□□ 0.07
VPS13B-204ENST00000441350 OR5I1Q13606 314 aa15.5■□□□□ 0.07
VPS13B-204ENST00000441350 KIR3DS1Q14943 382 aa15.5■□□□□ 0.07
VPS13B-204ENST00000441350 PRR9Q5T870 116 aa15.5■□□□□ 0.07
VPS13B-204ENST00000441350 SRD5A3Q9H8P0 318 aa15.5■□□□□ 0.07
VPS13B-204ENST00000441350 M0R2Z0 102 aa15.49■□□□□ 0.07
VPS13B-204ENST00000441350 CDKN1BP46527 198 aa15.49■□□□□ 0.07
VPS13B-204ENST00000441350 CRIP1P50238 77 aa15.49■□□□□ 0.07
VPS13B-204ENST00000441350 SPINK13Q1W4C9 94 aa15.49■□□□□ 0.07
VPS13B-204ENST00000441350 ISOC2Q96AB3 205 aa15.49■□□□□ 0.07
VPS13B-204ENST00000441350 GPX1P07203 203 aa15.48■□□□□ 0.07
VPS13B-204ENST00000441350 LINC00322Q6ZN03 302 aaPredicted RBP15.48■□□□□ 0.07
VPS13B-204ENST00000441350 SVBPQ8N300 66 aa15.48■□□□□ 0.07
VPS13B-204ENST00000441350 BIN3Q9NQY0 253 aa15.48■□□□□ 0.07
VPS13B-204ENST00000441350 S100A1P23297 94 aa15.47■□□□□ 0.07
VPS13B-204ENST00000441350 J3KRW8 73 aa15.46■□□□□ 0.07
VPS13B-204ENST00000441350 M0R036 132 aa15.46■□□□□ 0.07
VPS13B-204ENST00000441350 RPL35AP18077 110 aaKnown RBP15.46■□□□□ 0.07
VPS13B-204ENST00000441350 FXYD7P58549 80 aa15.46■□□□□ 0.07
VPS13B-204ENST00000441350 PRR27Q6MZM9 219 aa15.46■□□□□ 0.07
VPS13B-204ENST00000441350 C19orf71A6NCJ1 209 aa15.46■□□□□ 0.06
VPS13B-204ENST00000441350 CRXO43186 299 aaPredicted RBP15.46■□□□□ 0.06
VPS13B-204ENST00000441350 RNASE4P34096 147 aaKnown RBP15.46■□□□□ 0.06
VPS13B-204ENST00000441350 NUTF2P61970 127 aaKnown RBP15.46■□□□□ 0.06
VPS13B-204ENST00000441350 BTN1A1Q13410 526 aa15.46■□□□□ 0.06
VPS13B-204ENST00000441350 FAM162BQ5T6X4 162 aa15.46■□□□□ 0.06
VPS13B-204ENST00000441350 CLRN3Q8NCR9 226 aa15.46■□□□□ 0.06
VPS13B-204ENST00000441350 TRAV12-2A0A075B6T6 113 aa15.45■□□□□ 0.06
VPS13B-204ENST00000441350 GFI1BQ5VTD9 330 aa15.45■□□□□ 0.06
VPS13B-204ENST00000441350 Q6AWC8 147 aa15.45■□□□□ 0.06
VPS13B-204ENST00000441350 MORN3Q6PF18 240 aaPredicted RBP15.45■□□□□ 0.06
VPS13B-204ENST00000441350 C7orf71A4D174 169 aa15.44■□□□□ 0.06
VPS13B-204ENST00000441350 FABP5P3A8MUU1 101 aa15.44■□□□□ 0.06
VPS13B-204ENST00000441350 SH2D1AO60880 128 aa15.44■□□□□ 0.06
VPS13B-204ENST00000441350 SNAPINO95295 136 aa15.44■□□□□ 0.06
VPS13B-204ENST00000441350 AMBPP02760 352 aa15.44■□□□□ 0.06
VPS13B-204ENST00000441350 PFN1P07737 140 aaKnown RBP15.44■□□□□ 0.06
VPS13B-204ENST00000441350 GIG44P09565 113 aaPredicted RBP15.44■□□□□ 0.06
VPS13B-204ENST00000441350 IGHV4-30-4P0DP06 118 aa15.44■□□□□ 0.06
VPS13B-204ENST00000441350 FAM231DQ6ZW35 169 aa15.44■□□□□ 0.06
VPS13B-204ENST00000441350 RNASE7Q9H1E1 156 aaKnown RBP15.44■□□□□ 0.06
VPS13B-204ENST00000441350 B4DEV8 164 aa15.43■□□□□ 0.06
VPS13B-204ENST00000441350 Q6ZQT7 251 aa15.43■□□□□ 0.06
VPS13B-204ENST00000441350 SFRP2Q96HF1 295 aa15.43■□□□□ 0.06
VPS13B-204ENST00000441350 TUBA4BQ9H853 241 aa15.43■□□□□ 0.06
VPS13B-204ENST00000441350 LOC102724200A0A096LPH7 203 aaPredicted RBP15.43■□□□□ 0.06
VPS13B-204ENST00000441350 A8MZ25 164 aa15.43■□□□□ 0.06
VPS13B-204ENST00000441350 ZNF324O75467 553 aaPredicted RBP15.43■□□□□ 0.06
VPS13B-204ENST00000441350 ERVFC1-1P60608 527 aa15.43■□□□□ 0.06
VPS13B-204ENST00000441350 NUDT10Q8NFP7 164 aa15.43■□□□□ 0.06
VPS13B-204ENST00000441350 NUDT11Q96G61 164 aa15.43■□□□□ 0.06
VPS13B-204ENST00000441350 OSTCQ9NRP0 149 aa15.43■□□□□ 0.06
VPS13B-204ENST00000441350 TRAV12-3A0A0B4J271 114 aa15.42■□□□□ 0.06
VPS13B-204ENST00000441350 TRAV21A0A0B4J279 112 aa15.42■□□□□ 0.06
VPS13B-204ENST00000441350 IBA57Q5T440 356 aaKnown RBP15.42■□□□□ 0.06
VPS13B-204ENST00000441350 XCL2Q9UBD3 114 aa15.42■□□□□ 0.06
VPS13B-204ENST00000441350 C7orf77A4D0Y5 90 aa15.41■□□□□ 0.06
VPS13B-204ENST00000441350 RHEBQ15382 184 aa15.41■□□□□ 0.06
VPS13B-204ENST00000441350 RNF212Q495C1 297 aa15.41■□□□□ 0.06
VPS13B-204ENST00000441350 DAZAP1Q96EP5 407 aaKnown RBP15.41■□□□□ 0.06
VPS13B-204ENST00000441350 CSTL1Q9H114 145 aa15.41■□□□□ 0.06
VPS13B-204ENST00000441350 C11orf21Q9P2W6 132 aa15.41■□□□□ 0.06
VPS13B-204ENST00000441350 RBMY1A1P0DJD3 496 aaKnown RBP15.4■□□□□ 0.06
VPS13B-204ENST00000441350 RBMY1CP0DJD4 496 aa15.4■□□□□ 0.06
VPS13B-204ENST00000441350 RBMY1FQ15415 496 aaKnown RBP15.4■□□□□ 0.06
VPS13B-204ENST00000441350 OR10G8Q8NGN5 311 aa15.4■□□□□ 0.06
VPS13B-204ENST00000441350 KIR2DL5BA0A0G2JN68 375 aa15.39■□□□□ 0.05
VPS13B-204ENST00000441350 KIR2DL5BA0A0G2JPC4 375 aa15.39■□□□□ 0.05
VPS13B-204ENST00000441350 INSP01308 110 aa15.39■□□□□ 0.05
VPS13B-204ENST00000441350 P01737 135 aa15.39■□□□□ 0.05
VPS13B-204ENST00000441350 MT-ND4LP03901 98 aa15.39■□□□□ 0.05
VPS13B-204ENST00000441350 ATRAIDQ6UW56 229 aa15.39■□□□□ 0.05
VPS13B-204ENST00000441350 KIR2DL5AQ8N109 375 aa15.39■□□□□ 0.05
VPS13B-204ENST00000441350 C15orf54Q8N8G6 183 aa15.39■□□□□ 0.05
VPS13B-204ENST00000441350 KIR2DL5BQ8NHK3 375 aa15.39■□□□□ 0.05
VPS13B-204ENST00000441350 C20orf144Q9BQM9 153 aa15.39■□□□□ 0.05
VPS13B-204ENST00000441350 C1QTNF4Q9BXJ3 329 aa15.39■□□□□ 0.05
VPS13B-204ENST00000441350 V9GYV3 84 aa15.39■□□□□ 0.05
VPS13B-204ENST00000441350 CA1P00915 261 aaPredicted RBP15.38■□□□□ 0.05
VPS13B-204ENST00000441350 CSNK1G2-AS1Q8NCQ2 148 aa15.38■□□□□ 0.05
VPS13B-204ENST00000441350 ANAPC16Q96DE5 110 aa15.38■□□□□ 0.05
VPS13B-204ENST00000441350 A0A087WWC5 75 aa15.37■□□□□ 0.05
VPS13B-204ENST00000441350 PPP1R2P9O14990 202 aa15.37■□□□□ 0.05
VPS13B-204ENST00000441350 GATCO43716 136 aaKnown RBP15.37■□□□□ 0.05
VPS13B-204ENST00000441350 PRB2P02812 416 aaPredicted RBP15.37■□□□□ 0.05
VPS13B-204ENST00000441350 APOC4P55056 127 aa15.37■□□□□ 0.05
VPS13B-204ENST00000441350 LINC01559Q495D7 138 aa15.37■□□□□ 0.05
VPS13B-204ENST00000441350 RPP21Q9H633 154 aaKnown RBP15.37■□□□□ 0.05
VPS13B-204ENST00000441350 RPS10P5Q9NQ39 176 aa15.37■□□□□ 0.05
VPS13B-204ENST00000441350 IGKV3D-20A0A0C4DH25 116 aa15.36■□□□□ 0.05
VPS13B-204ENST00000441350 ZNF705GA8MUZ8 300 aaPredicted RBP15.36■□□□□ 0.05
VPS13B-204ENST00000441350 ORM1P02763 201 aa15.36■□□□□ 0.05
VPS13B-204ENST00000441350 ZNF575Q86XF7 245 aa15.36■□□□□ 0.05
VPS13B-204ENST00000441350 CTDSP1Q9GZU7 261 aa15.36■□□□□ 0.05
VPS13B-204ENST00000441350 K7EIL1 84 aa15.35■□□□□ 0.05
VPS13B-204ENST00000441350 RPL19P84098 196 aaKnown RBP15.35■□□□□ 0.05
VPS13B-204ENST00000441350 CT83Q5H943 113 aa15.35■□□□□ 0.05
VPS13B-204ENST00000441350 C1orf158Q8N1D5 194 aa15.35■□□□□ 0.05
VPS13B-204ENST00000441350 OR2D3Q8NGH3 330 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms