RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 KRTAP10-9P60411 292 aa10.99□□□□□ -0.65
LIMD1-202ENST00000440097 CIARTQ8N365 385 aaPredicted RBP10.99□□□□□ -0.65
LIMD1-202ENST00000440097 ZNF48Q96MX3 618 aaPredicted RBP10.99□□□□□ -0.65
LIMD1-202ENST00000440097 OTORQ9NRC9 128 aa10.99□□□□□ -0.65
LIMD1-202ENST00000440097 UNC79Q9P2D8 2635 aa10.98□□□□□ -0.65
LIMD1-202ENST00000440097 H3BRM9 83 aa10.98□□□□□ -0.65
LIMD1-202ENST00000440097 SLC25A16P16260 332 aa10.98□□□□□ -0.65
LIMD1-202ENST00000440097 PIFOQ8TCI5 191 aa10.98□□□□□ -0.65
LIMD1-202ENST00000440097 TRBV19A0A075B6N1 114 aa10.98□□□□□ -0.65
LIMD1-202ENST00000440097 TRAV41A0A0B4J266 112 aa10.98□□□□□ -0.65
LIMD1-202ENST00000440097 K7EP34 96 aa10.98□□□□□ -0.65
LIMD1-202ENST00000440097 TGFAP01135 160 aa10.98□□□□□ -0.65
LIMD1-202ENST00000440097 AVPP01185 164 aa10.98□□□□□ -0.65
LIMD1-202ENST00000440097 A6NDN8 102 aa10.97□□□□□ -0.65
LIMD1-202ENST00000440097 PRNTQ86SH4 94 aa10.97□□□□□ -0.65
LIMD1-202ENST00000440097 NPIPB6E9PJ23 425 aa10.97□□□□□ -0.65
LIMD1-202ENST00000440097 KIR3DS1Q14943 382 aa10.97□□□□□ -0.65
LIMD1-202ENST00000440097 CFAP161Q6P656 301 aa10.97□□□□□ -0.65
LIMD1-202ENST00000440097 FLNAP21333 2647 aaKnown RBP10.97□□□□□ -0.65
LIMD1-202ENST00000440097 ITPR3Q14573 2671 aa10.97□□□□□ -0.65
LIMD1-202ENST00000440097 FA2HQ7L5A8 372 aa10.96□□□□□ -0.65
LIMD1-202ENST00000440097 Q86TA4 180 aa10.96□□□□□ -0.65
LIMD1-202ENST00000440097 OR8A1Q8NGG7 326 aa10.96□□□□□ -0.65
LIMD1-202ENST00000440097 OR10AG1Q8NH19 301 aa10.96□□□□□ -0.65
LIMD1-202ENST00000440097 ZNF502Q8TBZ5 544 aa10.96□□□□□ -0.65
LIMD1-202ENST00000440097 RAB37Q96AX2 223 aa10.96□□□□□ -0.65
LIMD1-202ENST00000440097 EEF1AKMT3Q96AZ1 226 aa10.96□□□□□ -0.65
LIMD1-202ENST00000440097 AAMDCQ9H7C9 122 aa10.96□□□□□ -0.65
LIMD1-202ENST00000440097 A0A0G2JLM5 398 aa10.96□□□□□ -0.66
LIMD1-202ENST00000440097 RNF223E7ERA6 249 aa10.96□□□□□ -0.66
LIMD1-202ENST00000440097 ARMS2P0C7Q2 107 aa10.96□□□□□ -0.66
LIMD1-202ENST00000440097 CSN1S1P47710 185 aa10.96□□□□□ -0.66
LIMD1-202ENST00000440097 FAM106AQ4KMX7 169 aa10.96□□□□□ -0.66
LIMD1-202ENST00000440097 LINC01356Q8N9X3 169 aa10.96□□□□□ -0.66
LIMD1-202ENST00000440097 PRSS3P2Q8NHM4 247 aa10.96□□□□□ -0.66
LIMD1-202ENST00000440097 M0R3E3 92 aa10.95□□□□□ -0.66
LIMD1-202ENST00000440097 OR2K2Q8NGT1 345 aa10.95□□□□□ -0.66
LIMD1-202ENST00000440097 IGHV3OR16-13A0A075B7E8 117 aa10.95□□□□□ -0.66
LIMD1-202ENST00000440097 IGHV3-74A0A0B4J1X5 117 aa10.95□□□□□ -0.66
LIMD1-202ENST00000440097 IGHV3-66A0A0C4DH42 116 aa10.95□□□□□ -0.66
LIMD1-202ENST00000440097 A0A1B0GUT8 65 aa10.95□□□□□ -0.66
LIMD1-202ENST00000440097 K7EQM0 130 aa10.95□□□□□ -0.66
LIMD1-202ENST00000440097 TRGV3P03979 118 aa10.95□□□□□ -0.66
LIMD1-202ENST00000440097 RPL7P18124 248 aaKnown RBP10.95□□□□□ -0.66
LIMD1-202ENST00000440097 ATP5G2Q06055 141 aa10.95□□□□□ -0.66
LIMD1-202ENST00000440097 ZNF414Q96IQ9 312 aa10.95□□□□□ -0.66
LIMD1-202ENST00000440097 ASCL2Q99929 193 aa10.95□□□□□ -0.66
LIMD1-202ENST00000440097 CHTOPQ9Y3Y2 248 aaKnown RBP10.95□□□□□ -0.66
LIMD1-202ENST00000440097 MYO9AB2RTY4 2548 aa10.95□□□□□ -0.66
LIMD1-202ENST00000440097 LOXL1Q08397 574 aaPredicted RBP10.94□□□□□ -0.66
LIMD1-202ENST00000440097 NEGR1Q7Z3B1 354 aa10.94□□□□□ -0.66
LIMD1-202ENST00000440097 GATA3P23771 443 aa10.94□□□□□ -0.66
LIMD1-202ENST00000440097 BLCAPP62952 87 aa10.94□□□□□ -0.66
LIMD1-202ENST00000440097 SIGLEC15Q6ZMC9 328 aa10.94□□□□□ -0.66
LIMD1-202ENST00000440097 OR1N2Q8NGR9 330 aa10.94□□□□□ -0.66
LIMD1-202ENST00000440097 CCDC140Q96MF4 163 aa10.94□□□□□ -0.66
LIMD1-202ENST00000440097 IGHV3-49A0A0A0MS15 119 aa10.94□□□□□ -0.66
LIMD1-202ENST00000440097 ZNF207O43670 478 aaKnown RBP10.94□□□□□ -0.66
LIMD1-202ENST00000440097 CIDEAO60543 219 aa10.94□□□□□ -0.66
LIMD1-202ENST00000440097 IFI27P40305 119 aaPredicted RBP10.94□□□□□ -0.66
LIMD1-202ENST00000440097 BOD1L2Q8IYS8 172 aa10.94□□□□□ -0.66
LIMD1-202ENST00000440097 A0A096LNJ9 63 aa10.93□□□□□ -0.66
LIMD1-202ENST00000440097 HSD52Q0P140 79 aa10.93□□□□□ -0.66
LIMD1-202ENST00000440097 DPF1Q92782 380 aa10.93□□□□□ -0.66
LIMD1-202ENST00000440097 TRBV7-1A0A0A6YYK4 115 aa10.93□□□□□ -0.66
LIMD1-202ENST00000440097 LOC389332A0A1B0GUA5 103 aa10.93□□□□□ -0.66
LIMD1-202ENST00000440097 A6NJY4 79 aa10.93□□□□□ -0.66
LIMD1-202ENST00000440097 SMAD7O15105 426 aaKnown RBP10.93□□□□□ -0.66
LIMD1-202ENST00000440097 IGLV2-11P01706 119 aa10.93□□□□□ -0.66
LIMD1-202ENST00000440097 RIGQ13278 110 aa10.93□□□□□ -0.66
LIMD1-202ENST00000440097 ZNF785A8K8V0 405 aa10.92□□□□□ -0.66
LIMD1-202ENST00000440097 LYPD1Q8N2G4 141 aa10.92□□□□□ -0.66
LIMD1-202ENST00000440097 TPPP3Q9BW30 176 aa10.92□□□□□ -0.66
LIMD1-202ENST00000440097 SPCS1Q9Y6A9 102 aa10.92□□□□□ -0.66
LIMD1-202ENST00000440097 A0A1W2PPM0 123 aa10.92□□□□□ -0.66
LIMD1-202ENST00000440097 MRPS12O15235 138 aaKnown RBP10.92□□□□□ -0.66
LIMD1-202ENST00000440097 CACNG7P62955 275 aa10.92□□□□□ -0.66
LIMD1-202ENST00000440097 IGFL4Q6B9Z1 124 aa10.92□□□□□ -0.66
LIMD1-202ENST00000440097 PRSS57Q6UWY2 283 aa10.92□□□□□ -0.66
LIMD1-202ENST00000440097 NPFFR1Q9GZQ6 430 aa10.92□□□□□ -0.66
LIMD1-202ENST00000440097 A6NDX4 124 aa10.91□□□□□ -0.66
LIMD1-202ENST00000440097 PF4V1P10720 104 aa10.91□□□□□ -0.66
LIMD1-202ENST00000440097 FXYD7P58549 80 aa10.91□□□□□ -0.66
LIMD1-202ENST00000440097 ADAMTSL5Q6ZMM2 481 aa10.91□□□□□ -0.66
LIMD1-202ENST00000440097 MXRA5Q9NR99 2828 aa10.91□□□□□ -0.66
LIMD1-202ENST00000440097 PDE6HQ13956 83 aa10.91□□□□□ -0.66
LIMD1-202ENST00000440097 TMEM95Q3KNT9 176 aa10.91□□□□□ -0.66
LIMD1-202ENST00000440097 Q5PR19 223 aa10.91□□□□□ -0.66
LIMD1-202ENST00000440097 IGHV3-11P01762 117 aa10.9□□□□□ -0.66
LIMD1-202ENST00000440097 DEFB112Q30KQ8 113 aa10.9□□□□□ -0.66
LIMD1-202ENST00000440097 LGALS9BQ3B8N2 356 aa10.9□□□□□ -0.66
LIMD1-202ENST00000440097 LGALS9CQ6DKI2 356 aa10.9□□□□□ -0.66
LIMD1-202ENST00000440097 Q6ZS46 218 aa10.9□□□□□ -0.66
LIMD1-202ENST00000440097 OR9G4Q8NGQ1 327 aa10.9□□□□□ -0.66
LIMD1-202ENST00000440097 SIGLEC8Q9NYZ4 499 aa10.9□□□□□ -0.66
LIMD1-202ENST00000440097 IGHV4-59P01825 116 aa10.9□□□□□ -0.66
LIMD1-202ENST00000440097 DEFB113Q30KQ7 82 aa10.9□□□□□ -0.66
LIMD1-202ENST00000440097 PCP2Q8IVA1 136 aa10.9□□□□□ -0.66
LIMD1-202ENST00000440097 OR5A1Q8NGJ0 315 aa10.9□□□□□ -0.66
LIMD1-202ENST00000440097 METTL26Q96S19 204 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms